Tuni007209.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:4260046-4266625[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 7.3e-06 0.0021 20.4 0.7 3 23 407 427 406 427 0.97 2 12 1.9e-05 0.0056 19.0 1.8 1 23 432 454 432 454 0.98 3 12 0.0054 1.6 11.3 0.1 1 20 460 479 460 481 0.94 4 12 0.00027 0.079 15.4 3.0 2 23 497 518 496 518 0.96 5 12 0.0041 1.2 11.7 3.8 2 23 524 545 523 545 0.97 6 12 1.3e-05 0.0038 19.6 4.2 2 23 555 576 555 576 0.98 7 12 2.1e-05 0.006 19.0 0.8 2 23 582 603 581 603 0.97 8 12 0.00015 0.043 16.3 3.0 2 23 613 634 613 634 0.98 9 12 7.2e-05 0.021 17.3 0.9 1 20 640 659 640 661 0.96 10 12 6e-07 0.00017 23.8 0.6 3 23 678 698 677 698 0.98 11 12 2e-05 0.0058 19.0 0.9 2 23 704 725 703 725 0.97 12 12 0.054 15 8.2 1.8 1 21 731 751 731 752 0.88
Sequence Information
- Coding Sequence
- ATGGACACTCTATGCCGAGTTTGTATTAAACGAGCTGAAAAATGCACCGCACTAAGTTCTAAAATCGAGGACTCATCGAACCTATCGTTCCTTGGCTTCTTAAATAAGAGCACAAGCCTGAATGCACGCGAAGACGATAGTCTGCCGCAGAACCTTTGCTCCATTTGTGCTAATAGTATGAAAACTTTTTATGAATTTGTGAAGTTGGCCGAAAAATCTGATATAGTTCTCAAGGTAGCGTGGAAGAACTTAATTGCAAAGAGGAGGTATAATGGAAGCGGAGaGATTTATCGTGAGGAAACAATGAGGACCAACAAGATTGAGCAAGAATCCGTAGAAGATTTTAACCAGCGGGACTCATTTCATTATCCGCTAACTAGAAACTCAACTGGACCAAAACTTTGTATTCTGGATAATGTGAAGGAAGAACCGCAGGAATCCGAGAGCACGTCAACTGTTGATTTGAAAGATGCTGAAATCAATGAAAGCGAAAAATTTGAATCTAATCCAGATCATCCGAAGGGTGCCATCAACATTTTATCATGTACAGATCGTCGTCTACCGAGAATTGGTACAGAGAATACTGATTCTGAGGATGAGGTACCCATTAGtttgtttaaaagaaaattggGTAAATATGAGGATGAAGCCCATTTTCAAAGCAACTCTTTATCTGAACCATGCTGCATTCCTTCCAACGTGAAGGTAACATTAGATTTTTTAAAACGCAGATCGATATTAATTAAAACTTTCAAGAAAAAACCAGGTAAAATGAAAGGTAAAGTAATTAAGGAAGAAACTTTAGATGGTCCAAGTCTTCGCGGTGCGGGTAGTCAAATTGATAACAATGaaatTCATAGTGAGGAAATCACAATAAGGAACGAGAAGATTGAGGAAGACTTCAAAGATTTTAGCAAGGAAGATTCTTTTCAGTGCCAGTTAAATAAAAACTCAACTGGACCAACTCTTTATACTCTGGAAATTGTGAAGGAAGAACCTCGGTTCTCCGAAGGCACATCAATAGATGATTTAAAAGATGATGACATTAATGCAAGTGGAAATTTTGAATTCAACAACAAGTATCCGGAAAGGTGCCTCGAGGATCCTGATGACATTGGTTTATTGAAAAGAATATTGGCTAAGAACGAGGATGACGCTGATTCCCAAAcaATTTCTTGCGAGGAAATAACAGCAACAAACAAGGCAGTCGGGCACGGATGCGAGATATGCGGCAAAATATTTAGTACAAAGTATTACCTCAATGTTCACCTGGAACATCACAAGGGCATTACACACAAATGCGACCAGTGCGGCAAGGAATATAACAACAGTCTATCTCTAAAGATTCATATGAAGTGGCACGCTAATCCAAAACCGTATGCATGTGAAAACTGTGGAAAGCTGTTTGCTTGGAAGAACAACTACACTAGGCATATGGACATTTGTAAACGTCCAGGTGAACCAAAGAAATTGAATACAACAAAAGTTGAATGCAAAATATGCGGCAAAAAATTCTGTTCAAAGCAATATCTCAATTTTCACATGGAGAGTCACGCGGGGGTTACACAAAAATGCGATCAGTGCGACAAGGAGTGTCTCAACAGCCGTTCTCTCCGCAGACACATGAAATGGCACGCAAATACAAAATCTTTTAAGTTTGAGAAATGCGATATATGCGATAAAAAATTTACTACTAAAGAATGCCTCGATCGACATATGCAAAATCACAAGGGGATTATACAGAAATGCGACCAGTGCGACAAGGAATTTGAAAGTGTCTACAGTCTAAGCAGGCACATGAAGTGGCACAATAATCTAAAACCGTTAAAGTGCGAAAAATGCGACCAGTGCGATAAGAAATTCGAAAGCATTCATACTCTACGCATTCACATGAAGCTGCACACTAATCCTGATCTGTTTAAGTGTGAAAGATGTGGGAAGACGCTTTCCAGCAAATACAACTACATCAGCCATATGGACTTTTGTAAACGACGAGCTAAGCCACAGCAATTGAATGACACAAAAGCTGATTGCGGCATATGTGGGAAAATTTTTAGGAGAAAAGATTACCTCAATTTACATATGCAAAAGCACAAAGGGATTACACAGAAATGCGATCAGTGCGACAAGGAATTTGAGAACGTCTATAGTCTACGCAGGCACTTGAAATGGCACGCTAATCCGAAACCGTTTAAGTGTGAAAACTGCGGGAAATTCTTTGCTTGGAAACGCAACTACGCTTGTCATATGAGAATTTGCAAACCCCAAGGCAGTTCATTCGAGGAAACAATTCCAATCGAGAAGCAAAGCTTGCAACCGGAAGAAAACAAAGATATCATGGTAGCAATAACGTAA
- Protein Sequence
- MDTLCRVCIKRAEKCTALSSKIEDSSNLSFLGFLNKSTSLNAREDDSLPQNLCSICANSMKTFYEFVKLAEKSDIVLKVAWKNLIAKRRYNGSGEIYREETMRTNKIEQESVEDFNQRDSFHYPLTRNSTGPKLCILDNVKEEPQESESTSTVDLKDAEINESEKFESNPDHPKGAINILSCTDRRLPRIGTENTDSEDEVPISLFKRKLGKYEDEAHFQSNSLSEPCCIPSNVKVTLDFLKRRSILIKTFKKKPGKMKGKVIKEETLDGPSLRGAGSQIDNNEIHSEEITIRNEKIEEDFKDFSKEDSFQCQLNKNSTGPTLYTLEIVKEEPRFSEGTSIDDLKDDDINASGNFEFNNKYPERCLEDPDDIGLLKRILAKNEDDADSQTISCEEITATNKAVGHGCEICGKIFSTKYYLNVHLEHHKGITHKCDQCGKEYNNSLSLKIHMKWHANPKPYACENCGKLFAWKNNYTRHMDICKRPGEPKKLNTTKVECKICGKKFCSKQYLNFHMESHAGVTQKCDQCDKECLNSRSLRRHMKWHANTKSFKFEKCDICDKKFTTKECLDRHMQNHKGIIQKCDQCDKEFESVYSLSRHMKWHNNLKPLKCEKCDQCDKKFESIHTLRIHMKLHTNPDLFKCERCGKTLSSKYNYISHMDFCKRRAKPQQLNDTKADCGICGKIFRRKDYLNLHMQKHKGITQKCDQCDKEFENVYSLRRHLKWHANPKPFKCENCGKFFAWKRNYACHMRICKPQGSSFEETIPIEKQSLQPEENKDIMVAIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -