Tuni007207.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:4227907-4239135[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.6e-06 0.001 21.4 0.8 1 23 217 239 217 239 0.98 2 14 0.00034 0.098 15.1 1.4 2 23 245 266 244 266 0.97 3 14 0.13 37 7.0 0.7 1 11 272 282 272 293 0.79 4 14 0.00012 0.033 16.6 0.1 2 23 305 326 305 326 0.96 5 14 5.1e-06 0.0015 20.9 0.8 2 23 332 353 331 353 0.97 6 14 0.00065 0.19 14.3 2.1 1 21 359 379 359 380 0.96 7 14 7.9e-06 0.0023 20.3 0.1 1 23 396 418 396 418 0.96 8 14 9.6e-06 0.0027 20.0 0.9 2 23 424 445 423 445 0.97 9 14 0.12 35 7.1 4.5 1 19 451 469 451 472 0.91 10 14 2.6e-06 0.00075 21.8 2.1 1 23 811 833 811 833 0.96 11 14 3e-05 0.0087 18.4 5.6 1 23 838 860 838 860 0.98 12 14 7.9e-07 0.00023 23.4 1.8 2 23 865 886 864 886 0.97 13 14 0.0015 0.43 13.1 0.6 2 23 891 912 890 912 0.96 14 14 0.23 65 6.2 1.0 1 13 918 930 918 932 0.90
Sequence Information
- Coding Sequence
- ATGAAGGAGGAGCCACCCGTCTCCGAGAGCACATCAATTGTAGATTTGGAAGATGCTGAAATCCACAAAAATGAAAGATTTCCACATCCGGAAGGGAACATCGAGGAATTTGATGACATTTTATCATGTGTAGATCGTCTTGTAGCGGGCATTGATGTAGAGCATACTGATTCTGAAGATAAGGCGCCCATTAGCTTACTGAAAAACAAACTGGGTAAAACTACTGCGGATGAGATCGATACCAAAAATCAAACATTATTAGAGGCACACTGCATACCTTCTAACGTGAAAaaaaaaactGACGAAAAAGGACCAAAAACGCAAGAAACTTTAGATCCTCAAAATATCGTTGACCTTAATGGCGAGGAAATCAcgataaaaaaagagaaaattgaGgAAGATTCATTTCATTGTCAGCCAAGGAAAAACTCAACTGAATCACCACTTTTTATCCTGGATATTGTAAAGGAAGAGCCGCACATATCCGAAAGCACATCGGATCGTCATCTAACAATCATTGATACAGAGTACACAGATTCTGAGGATGATGTACCACTTAGTTTATTGAAGGGGAGATTGGCTAAGTATGCGGAGGACTCTCACAGAAATTCTCGCGAGGAAATAACAACAAGAGACAAAACGACTGTGTATGAATGTGAGATTTGCGATGAACAATTTAGTTCAAAACATGACCTCAAAGTCCATTTGGATAGTCACAAGGAGAATACACAAAAATGCGATCGGTGTGGCAAAGAATTTTTAAGCAGTTACAGTCTACGCAGACACTTGGAAAGGCACGACAATCCATACCCGTTTGAGTGCGACAAATGCGGCAAGTTTTTTGCTTGGAACTTCAATAGCACCAGGCATAAGGCCACTTGTAAAAGACGAATTGAACATGAAATCAAAGGTGAATGCGATATATGCGGTATAAAGTTTACTAGGAAAGCTGCCTTCGATGTTCATATGGAAAATCATATGGGATTTACACTCCAATGCGATAAGTGCGGCAAGGAATATAAGAACAGCGTTACTCTAAAAATGCACATGAAATGGCACGCTAATCCAGAGAAGTTTCAGTGTGAAAAGTGTGGGAAGTACCTTACTAGCAATTGCGCCTACAAAAGGCATATGCAAATTTGTAAAGGTCCAGATAAGCCAAAGCCGTTGAAAAAGAAACCTGAATTTATATGCAGCATATGCGGTAAAAATTTTACTACAAAAGCTGCCCTCGTTGTGCACACGGAAAATCATCAGGGGATTACACAGAAATGCGTTCTATGCGGCAAGGAATTTGTGTACAAATATAGTTTACGCAGACACTTGAAATGGCACGATAATCCTTACCCGTTTGAGTGTAAAAAATGCGGGAAGTTTTTTGCTTGGAAGACGAGTTACAATAAACATAATTGTAAGACGGCGTCTGATTCGCTCAAGGAAGAAGTAGCAATCGAGAAGCCAAATTTGCACCCAGAAGGAAGCGAAGAGGTAAAAGAAACTCAAAGTGGTGTTGTAATTATTCTCAACGGTGAAGGTGATAGTCTGCCGCAAAGCCTTTGCTCGGTTTGTGCTGATAGTATGAAAACTTTTTATGCATTTGTGAAGTTGGCCGAAAAGTCTGATATAATTTTAAGGGAAGCATTGAAGAACTTAAGGGGAAAAGGAAGATATAAGGGTAGTGGAGAGATTTCTTGCGAggaaataaacatgaaaaagcCGGAGATTGAGGAAGAGTCTGAAGATGTAAACCAGGACGACTCATTTCTATGTCAACCTAGTAGAAACTCAATTGGGCCAGATTTTGTTATTATGGATATTGTGAAGGAAGAAGTAGGCATCTCCGAGAGCACATCAATTGTTGATTTGCAAGATGCTGAAACTGGAACTTTTGAATCTAGTCTAGATCATCCGAAGAATGCCGGGCATTCTGTGGGACCCATTagcttattaaaaaataaattgggtAAAAACGAGGATGAGATCGataccaaaaataaaacattatctGAAGCGCACTGCATTCTTTCGAACGTGAAAaaaaaaacgGATGAACAAGGACCGAACACGGAAATAGTAATTAAGCAAGAACCTTTAGATCCTCAGAGAATTATTGGTTTAATTGAAAATAGCGaaattttttgcGAGGAATCTACAATAACAAACGAGAAGGTTGAGGACGATTCATTTCATTGTCAGCCAAGGGAAAACTCAACTGGATCACCACTTTATATCCTGGATATTGTCAAGGAAGAACCGCGCGTAtccgaatgcacatcagatagGCGTCTAACGAGCATTGATACAGAGTACACAGATTCTGAGGAAGATGTACCCATTGATTTATTGAGGAGATTGTCCAAGGATGAGGATGAAACTGATTCTCAAAGAAATTCTTGCGAGGAAATAACAATAAGAAACGAAACGATTGATcaTGAATGCGACATATGCGGCAAAATATTTACTACGAAATATTACCTCAAAGTTCATCGGGAATATCACAAGGGGATTACATACAAATGCGACCAGTGCAAGAAGGAGTTTACACACAGATATAGTTTATACAGGCACCTAAAATGGCACACTAATCCAACAACATGCgaaatatgtaataaaaactttactaGGAAGTCATACCTTAAACTTCATATGGAAAGTCACAAGGCCATACAAAAGTGCGACCAGTGCGGCAAGGAATATAAGAACAGTCTTATCCTAAGGAGGCACATGGAATGGCACGCCAATCCAAAGCCGTATAAGTGCGAAAACTGCGGGAAGTTTCTTTCGAACAAACAGAAGTAA
- Protein Sequence
- MKEEPPVSESTSIVDLEDAEIHKNERFPHPEGNIEEFDDILSCVDRLVAGIDVEHTDSEDKAPISLLKNKLGKTTADEIDTKNQTLLEAHCIPSNVKKKTDEKGPKTQETLDPQNIVDLNGEEITIKKEKIEEDSFHCQPRKNSTESPLFILDIVKEEPHISESTSDRHLTIIDTEYTDSEDDVPLSLLKGRLAKYAEDSHRNSREEITTRDKTTVYECEICDEQFSSKHDLKVHLDSHKENTQKCDRCGKEFLSSYSLRRHLERHDNPYPFECDKCGKFFAWNFNSTRHKATCKRRIEHEIKGECDICGIKFTRKAAFDVHMENHMGFTLQCDKCGKEYKNSVTLKMHMKWHANPEKFQCEKCGKYLTSNCAYKRHMQICKGPDKPKPLKKKPEFICSICGKNFTTKAALVVHTENHQGITQKCVLCGKEFVYKYSLRRHLKWHDNPYPFECKKCGKFFAWKTSYNKHNCKTASDSLKEEVAIEKPNLHPEGSEEVKETQSGVVIILNGEGDSLPQSLCSVCADSMKTFYAFVKLAEKSDIILREALKNLRGKGRYKGSGEISCEEINMKKPEIEEESEDVNQDDSFLCQPSRNSIGPDFVIMDIVKEEVGISESTSIVDLQDAETGTFESSLDHPKNAGHSVGPISLLKNKLGKNEDEIDTKNKTLSEAHCILSNVKKKTDEQGPNTEIVIKQEPLDPQRIIGLIENSEIFCEESTITNEKVEDDSFHCQPRENSTGSPLYILDIVKEEPRVSECTSDRRLTSIDTEYTDSEEDVPIDLLRRLSKDEDETDSQRNSCEEITIRNETIDHECDICGKIFTTKYYLKVHREYHKGITYKCDQCKKEFTHRYSLYRHLKWHTNPTTCEICNKNFTRKSYLKLHMESHKAIQKCDQCGKEYKNSLILRRHMEWHANPKPYKCENCGKFLSNKQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -