Tuni007202.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:4179209-4188201[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 8e-07 0.00023 23.4 5.1 1 23 256 278 256 278 0.98 2 17 0.0067 1.9 11.1 3.0 1 14 284 297 284 302 0.90 3 17 0.00014 0.04 16.4 0.6 3 23 327 347 325 347 0.97 4 17 0.0064 1.8 11.1 0.1 1 20 354 373 354 375 0.95 5 17 0.00011 0.033 16.6 1.1 3 23 397 416 396 416 0.96 6 17 9.1e-06 0.0026 20.1 2.7 1 23 445 467 445 467 0.97 7 17 5.4e-06 0.0016 20.8 1.4 2 23 473 494 472 494 0.97 8 17 1.1 3e+02 4.2 3.3 1 10 500 509 500 519 0.94 9 17 2.2e-05 0.0064 18.9 1.7 2 23 533 554 533 554 0.96 10 17 0.032 9.2 8.9 2.6 2 23 560 580 559 580 0.96 11 17 0.042 12 8.5 1.3 1 12 586 597 586 599 0.89 12 17 4.5e-06 0.0013 21.0 2.1 1 23 618 640 618 640 0.97 13 17 2e-06 0.00058 22.1 4.1 1 23 645 667 645 667 0.98 14 17 0.0028 0.79 12.3 0.4 1 20 673 692 673 694 0.95 15 17 1.1e-05 0.0032 19.8 1.8 2 23 706 727 706 727 0.97 16 17 0.0036 1 11.9 0.4 2 23 735 755 734 755 0.96 17 17 0.035 10 8.8 0.4 1 14 761 774 761 775 0.92
Sequence Information
- Coding Sequence
- ATGGAAGCTTTGTGTCGGATTTGCATGGAGCAGGCAGCGAAGTGCACCCCCTTAAGTTCTAAAATCGATGATTGCTCCAACAGGTCGTTCTTTGATTTCCTGAATAAGTGCACAACTCTAAATGCCTGCGAAAGTGATAGCCTCCCGCAAAGCCTCTGTTCAGTTTGTGCTAATGCTATGAAGACGTTTCATTCCTTCATGAAACTGGCTGAGAAATCCGATCTAATCTTGAGGGAAGCCTTGAGAAACTTAGTGGCAGAAGGCAGATACAATGGCCGCAGAGaaACTCCTCGTGGCGAAATTGCAATAACAAAGAAGATTGAGAAGGAACCAATCGAGAGCACGCAGATTGTTCATGTGAAAAATGCTGGAATCAACGAAGCTGAAAATTTTCACTCTAAGCTTGACCGTCCGGAGGGGAACATCGAGGAACTTGATGAAATTTTAGTTTGTATAGATCGTCATCTTGCAAGCATTGATGCAAAGCATAACGATTATGAGGATGACGTGCCCATTAGTTTACTGAAAAGTAGATTGGTTAAAAATGAGGATGGAGCTGATTCTCAAAGTAACTCTCAGAAAGTTGAGAGCAGCATCGACGAACCTGGTTACATTTCACCACGTAGAGATAGCCATCGTCTAGCGATCAATCATACCGAGCCTTTTGTTACTGAGGCTGACGTGCCCATTGATTTACTGAGAAGTATACTGTATAAAAATCGGGAAGAAGCTGATTCTCAAAGTAAAGTTCACCAGGAAATTCGCCACAAATGCAATCAGTGCGACAAGAAATTTCGAAGCATTTATAATCTACGCAAACACATGAGATGGCACAAGAATGCAAAATCGTTTAAGTGCGGAGGCTGCGGCAAGTCGTTCCGTCGCAAAGACCGCTGCATTACGCATAATGTCATTTGCAAACGTCGAAGTAAGCCGCAGCAACTGAAAACCCCGGAATTGAAAAAATCGGAAACTGATTGCAGAGTTTGCGGTAAAGCATTTGGCAGCGAGGATTGCTTAGTTGATCATATGAGAAATCATCTGGGAGTTACAACATGGTTTAAGTGTGAAAACTGTGGACAGTTCTTTGCTTTGGAAGCCACCTACACTAAGCATTTGGGCATATGTAAAGTTCAGCCGCCACCGAAAACTAAACCCGAATGCAATATATGCGGAATCAAAAAAATCTGCGTTGTGTGCGGCAAGAAATTTAGCAGTCTTTCCCTAAGAAAACACATGCGAAGGCACGCTAATCCAAATCTGTTCAATTGCGAGACCAGTGGGAAGTCGCGTTCCAGTTACAATTCTAGTGATATGGAGATTAATAGGAAATTTCATTGTGAGTTATGCGAAAAAAAGTTCACCACAAAATATTACCTTATTGCTCATATGGACAGTCACAAGggatttagaaaaaaatgcGATCTCTGCGGCAAGGAATTTCAATCCAGGGTTTCTTTAAAAAGACACATGAAGTGGCACGTAAATCCCAAACCGTATGCATGTGAAAAGTGTGGAAAGTGCTTTCTTTGGAAATGCGCCTACACTGAGCATTTGGACACTTGCAAAGGTCCAAGGCAACCGAAAACTACACCCGAATGCAAAATATGCGGTAAGCAATTTAGTACCAAACACTACCTCGGTCTTCATATGGAAAATCACAAAGGAATTAAAAAGAAATGCCTTCAGTGCGGCAAGAAATTTAGCATTCTTGTCCTGAAGAAACACATGAAAAAGCACGATAATCCAAAACGGTTCAATTGTGAAACCTGTGGGAAGTCGTTTTCTAGCTACAACCCTAGACACATGGAGACTTGTAAACATCCAGATGATCCATTCTTGAAAGCGAAATTTGATTGTAAGTTATGCGACAAAAAATTTACCACGAAACGTTACCTTAGTGTTCACATGGAAAGTCACAAGGGAGTTCGACACAAATGCGATCAGTGCGGCAAGGATTTCAAAACCAGCAAATCTTTAAGAACCCACATGGAACGGCACAATAATCCGCAATCGTTTAAGTGTGAAAAATGCGGAGAGTTCCTTGCTTCGAAACGCTCCTACACTAGGCATGTGGGCACTTGTAAAGGTCCACGGCAGCCGAAAGCTACACCTGAATGCGAAATATGCGGTAAACAATTTACTAGAAAACATTCCCTCGCTCTTCATAAGGAGACTCACAAAGAaagtagaaataaaataaaatgcgaTGAGTGCGGCAAGGAGTTAAGCAGTCTTTCCCTAAGCAGGCACATGAAATTGCACACTTATGCAAAACCTTTTAAGTGTGAAAACTGTGGAGAGGCGTTTGCTTCGAAATACGAGTAA
- Protein Sequence
- MEALCRICMEQAAKCTPLSSKIDDCSNRSFFDFLNKCTTLNACESDSLPQSLCSVCANAMKTFHSFMKLAEKSDLILREALRNLVAEGRYNGRRETPRGEIAITKKIEKEPIESTQIVHVKNAGINEAENFHSKLDRPEGNIEELDEILVCIDRHLASIDAKHNDYEDDVPISLLKSRLVKNEDGADSQSNSQKVESSIDEPGYISPRRDSHRLAINHTEPFVTEADVPIDLLRSILYKNREEADSQSKVHQEIRHKCNQCDKKFRSIYNLRKHMRWHKNAKSFKCGGCGKSFRRKDRCITHNVICKRRSKPQQLKTPELKKSETDCRVCGKAFGSEDCLVDHMRNHLGVTTWFKCENCGQFFALEATYTKHLGICKVQPPPKTKPECNICGIKKICVVCGKKFSSLSLRKHMRRHANPNLFNCETSGKSRSSYNSSDMEINRKFHCELCEKKFTTKYYLIAHMDSHKGFRKKCDLCGKEFQSRVSLKRHMKWHVNPKPYACEKCGKCFLWKCAYTEHLDTCKGPRQPKTTPECKICGKQFSTKHYLGLHMENHKGIKKKCLQCGKKFSILVLKKHMKKHDNPKRFNCETCGKSFSSYNPRHMETCKHPDDPFLKAKFDCKLCDKKFTTKRYLSVHMESHKGVRHKCDQCGKDFKTSKSLRTHMERHNNPQSFKCEKCGEFLASKRSYTRHVGTCKGPRQPKATPECEICGKQFTRKHSLALHKETHKESRNKIKCDECGKELSSLSLSRHMKLHTYAKPFKCENCGEAFASKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -