Basic Information

Insect: Thereva unica
Gene Symbol: -
Assembly: GCA_949987705.1
Location: OX465281.1:4268582-4272611[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.025 7.3 9.2 2.6 1 23 144 166 144 166 0.94

2 17 1.4e-06 0.0004 22.7 3.6 1 23 172 194 172 194 0.97

3 17 4.2e-09 1.2e-06 30.6 0.4 1 23 200 222 200 222 0.99

4 17 0.002 0.57 12.7 4.0 1 23 228 250 228 250 0.99

5 17 0.00016 0.047 16.1 2.0 1 23 255 277 255 277 0.95

6 17 4.7e-05 0.014 17.8 2.2 2 23 287 308 286 308 0.97

7 17 0.0019 0.53 12.8 2.3 2 23 318 339 318 339 0.97

8 17 7.7e-06 0.0022 20.3 3.1 2 23 345 366 344 366 0.97

9 17 0.0067 1.9 11.1 2.6 1 20 372 391 372 392 0.97

10 17 5e-06 0.0014 20.9 0.3 3 23 410 430 408 430 0.95

11 17 0.00026 0.074 15.5 1.2 2 23 436 457 435 457 0.97

12 17 1.8e-05 0.005 19.2 0.6 1 21 463 483 463 484 0.95

13 17 1.1e-06 0.00032 22.9 0.5 2 23 499 520 499 520 0.97

14 17 0.00021 0.059 15.8 7.4 2 21 526 545 526 547 0.95

15 17 7.5e-05 0.022 17.2 3.9 2 23 554 575 554 575 0.98

16 17 2.9e-05 0.0084 18.5 0.9 2 23 581 602 580 602 0.97

17 17 0.00052 0.15 14.5 1.4 1 21 608 628 608 629 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.025	7.3	9.2	2.6	1	23	144	166	144	166	0.94
2	17	1.4e-06	0.0004	22.7	3.6	1	23	172	194	172	194	0.97
3	17	4.2e-09	1.2e-06	30.6	0.4	1	23	200	222	200	222	0.99
4	17	0.002	0.57	12.7	4.0	1	23	228	250	228	250	0.99
5	17	0.00016	0.047	16.1	2.0	1	23	255	277	255	277	0.95
6	17	4.7e-05	0.014	17.8	2.2	2	23	287	308	286	308	0.97
7	17	0.0019	0.53	12.8	2.3	2	23	318	339	318	339	0.97
8	17	7.7e-06	0.0022	20.3	3.1	2	23	345	366	344	366	0.97
9	17	0.0067	1.9	11.1	2.6	1	20	372	391	372	392	0.97
10	17	5e-06	0.0014	20.9	0.3	3	23	410	430	408	430	0.95
11	17	0.00026	0.074	15.5	1.2	2	23	436	457	435	457	0.97
12	17	1.8e-05	0.005	19.2	0.6	1	21	463	483	463	484	0.95
13	17	1.1e-06	0.00032	22.9	0.5	2	23	499	520	499	520	0.97
14	17	0.00021	0.059	15.8	7.4	2	21	526	545	526	547	0.95
15	17	7.5e-05	0.022	17.2	3.9	2	23	554	575	554	575	0.98
16	17	2.9e-05	0.0084	18.5	0.9	2	23	581	602	580	602	0.97
17	17	0.00052	0.15	14.5	1.4	1	21	608	628	608	629	0.96

Sequence Information

Coding Sequence: ATGGCTGAAAAATCTGATATAATTTTGAGGGAAGCTGTGGAAAACTCAGTTGCACCAGGAAGGTGTTACGATGACAGAGgatTTTATTGGGAGGAAATCGCAGTAAGAAACGAGAAGATTGAGGAAGAACCGCGCTTATCCGAAAGCATATCAATTGGTGACTTAAAAGAGGATGAAATTAATGCTAGCGGAGATTTTGAATCCAATCTTAACCATCCGGAAAAGAGCATCGAAGAACCTTATGGCCGTCTAGAGAGCAGTGCTATAGAGCACTCTGATTTTGAGGTTGACGTACCCGTTAGTTTATTGAACAGGAGATTTCCTAAAAAAGAGGATGAAGCTGATTCTCAAAGTAATTCATATATTGCTAACATTTTAAcTAAGGACGACTCATTAACACCAAATGTTTCTCGACGCACCGAAAACACTTACAAATgtataaaatgcgacattactTTCGATGATAAAGAGGAATTTAGAGCACATTGCCGAAATCATATTTGTGGAAACAAGCACGAGTGCAATATTTGTGGAAAGACGTTCGCTAGATACTCTTATCTCCATAGACATTTAGGAACTCACGAAGAAACAAAGAAATACAAATGTTCAGTTTGTGGAAAGAGTTTTAAGCAAGCCTCAACCCTGTGGGCACACATGAAGATACATAGCGACAAGAAACCTTTTCAATGCGAAACATGTGGaatgaaatttcattttaaaacaaagtACGAGTTACATTTACGTGTGCATTTAAACATCACTCATCCATGTGCGCAATGTGGAAAAgtatataaaacgaaaaaatgtcTTTTGGCACATCTTGAGGAACACGCTGGCGAGaagaaaaatgttacaaaagtaTGCGATCTCTGCAACAAGGAGTTTGCAAACAGTGCTGCATTGTGCAAACACCGCAAGCGGCATACTGATCGAAAATCGGTTAAGGGTGAAAAATGTCCGATATGCAGTAAACAGTGTATGACAAAGAAGTCGCTCGATGCTCATATGGAAAATCACAAAGATAGTGCTAAAAAATGCGATCAATGCGGCAAACAATTTGCACATAGGCAGGGTCTGCGCAGGCATATGAAATGGCACACTAATCCGAGGCCTTTTAAGTGTAAATACTGTGGCAAGTTACTTGCTAGGAAATGCACGTACACTACGCATATGGGGTTTTGTAAACGTGGAGGCAATCTACAGAcattaaataaaacgaaaactGATTGCGAAATATGCGGCAAAGTATTTATTAGCGAAGAGCACCTTAAACTACATATGGAAGATCACAAGGGGATAACACAAAAATGCTTGCAATGCGATAAGGAATTTGAAAGCATCTTTACTCTCCGCAGGCACATCAAATTACACTCTAATCGAAATCTGTTCAAGTGTGAAAACTGTGGCAAGTCGCTTTCTAGCAAATTCAACTACACAAAACATATCGAGATTTGTAAACTTCCATATAAACCACAGCCATTGGATAAAACAGCTGAATGTGAGATATGCCGCAAAAAATTCACTAGAAAAGCTGCCCTTAATGTTCATATGGAAACTCACATGGGGATTGTACCGAAATGCAATCAATGCGGCAAGGAGTTTACCCACAGATTTAGTCTACGCAGGCACATGAAATGTCACGATAATCCAAAGTCTGAAAAATGCGACAAATGTAATAAGAAATTTTGTTCAAAAGAATACCTCCTGCTTCATATGGCTAGCCACAAGGAGATTGCACAAAAATGCGACCTATGCGACAAGGAATATAAAAACCGGCTTTCTCTACAAAATCACATCAGATGGCACGCCAACCCGAGGCCGTTTAAGTGTGAAAACTGTGGAAAGTGCATTTCTACCAGAATAAGCTACGATAGGCACATGAAAATTTGTAAACCTGTTGGCGATTCGTTTGTGGAACCAGTACCAACTGAGAAACCAATCTTGCACCCGAAAGGAAACACAGATATCGTGATAACAATAAAAGAATAA
Protein Sequence: MAEKSDIILREAVENSVAPGRCYDDRGFYWEEIAVRNEKIEEEPRLSESISIGDLKEDEINASGDFESNLNHPEKSIEEPYGRLESSAIEHSDFEVDVPVSLLNRRFPKKEDEADSQSNSYIANILTKDDSLTPNVSRRTENTYKCIKCDITFDDKEEFRAHCRNHICGNKHECNICGKTFARYSYLHRHLGTHEETKKYKCSVCGKSFKQASTLWAHMKIHSDKKPFQCETCGMKFHFKTKYELHLRVHLNITHPCAQCGKVYKTKKCLLAHLEEHAGEKKNVTKVCDLCNKEFANSAALCKHRKRHTDRKSVKGEKCPICSKQCMTKKSLDAHMENHKDSAKKCDQCGKQFAHRQGLRRHMKWHTNPRPFKCKYCGKLLARKCTYTTHMGFCKRGGNLQTLNKTKTDCEICGKVFISEEHLKLHMEDHKGITQKCLQCDKEFESIFTLRRHIKLHSNRNLFKCENCGKSLSSKFNYTKHIEICKLPYKPQPLDKTAECEICRKKFTRKAALNVHMETHMGIVPKCNQCGKEFTHRFSLRRHMKCHDNPKSEKCDKCNKKFCSKEYLLLHMASHKEIAQKCDLCDKEYKNRLSLQNHIRWHANPRPFKCENCGKCISTRISYDRHMKICKPVGDSFVEPVPTEKPILHPKGNTDIVITIKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -