Tuni053128.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thereva unica
Gene Symbol
-
Assembly
GCA_949987705.1
Location
OX465284.1:20315465-20333145[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00016 0.045 16.2 1.1 2 23 174 195 174 195 0.97
2 20 5.8e-06 0.0017 20.7 1.2 1 23 201 223 201 223 0.98
3 20 1e-05 0.0029 19.9 1.8 1 23 229 251 229 251 0.98
4 20 0.0001 0.03 16.7 1.3 2 23 258 280 258 280 0.96
5 20 0.0019 0.54 12.8 1.2 1 17 286 302 286 303 0.93
6 20 0.12 36 7.1 0.5 1 23 450 472 450 472 0.84
7 20 9.7e-05 0.028 16.9 1.7 1 23 478 500 478 500 0.98
8 20 4.4e-06 0.0013 21.1 1.0 1 23 506 528 506 528 0.98
9 20 0.021 5.9 9.5 4.3 1 23 590 613 590 613 0.97
10 20 0.49 1.4e+02 5.2 1.3 1 19 677 695 677 697 0.95
11 20 0.00011 0.031 16.7 6.8 2 23 799 820 798 820 0.97
12 20 0.0011 0.32 13.5 6.0 1 23 826 848 826 848 0.96
13 20 0.00029 0.082 15.4 0.6 1 23 854 877 854 877 0.91
14 20 6.8e-07 0.00019 23.6 0.3 2 23 888 909 888 909 0.97
15 20 1.1e-06 0.00033 22.9 1.2 1 23 914 936 914 936 0.98
16 20 3.1e-06 0.00089 21.6 0.3 1 23 942 964 942 964 0.96
17 20 6.1e-07 0.00017 23.8 0.6 1 23 970 992 970 992 0.98
18 20 1.2e-06 0.00036 22.8 0.7 3 23 1000 1020 998 1020 0.96
19 20 5.2e-07 0.00015 24.0 1.2 1 23 1026 1048 1026 1048 0.99
20 20 0.0021 0.61 12.6 0.8 1 23 1053 1076 1053 1076 0.98

Sequence Information

Coding Sequence
ATGGAAAATATTTGTCGTATTTGTATGAATGGTTCTGGTGAATTAATATCTATggtaaaagaaataaatttaaacacTTACGAAATACTCACAATTGGCGAAAAGTTTGAAGAGTGTTTCGGCCTGAAGCTTGAAGATATTCCAACACTCACGAAAATATGTGTGCAGTGCAAGATACAACTCACCTGCTTTCATCAATTTAAGGAACAAGCATTAAAAACGCATGAAAAATTGTTTGAAATCTCACTGGAAGATGATCCCGCCGAAGACTATCCCCATAGGAAAGACGAAGATGAATCAGATGACGCCATTTCAGTTGAATATCTTGACGATAAACAAGAATCTGAGATTCCGCATATTGACTCGCAAGCCAGTTTTATAGAAGGAACAGGCGAAACTGAGGAGCTAGTTCAGTCCATCGAGCATGTCTCCGACTTAGAAGATGATCATACAGAAAGTGAAGAGAGTGAATTTGATGAAACCAAATTCTTTGAATATTTAGATTCTCAGACTTGGAGAAGCTGTTCAATATGCAGTAAGGAATTCAGACGTAAGGCTGAATATTTATATCACATGAATAATCACAATAACAATAGAAACTACAAGTGCGAAACATGTGAGAAAAGTTTTATTACCAATTGGGATCTGAAGCTGCACTTGCGATTCCACAATGATATTAAGCCTTTTGTATGCGATATTTGTGGTCGACAATTTAGAATTAAAAGTCATTTGACATACCATCTAGAAACTCATGCTGAGGAGAATCAGAATGAGTGTCCCATATGCCATCAAATGTACAAGACTAAAACAACCTTAAAAGGGCACATGGACACAATTCATTTAAGACAAAAACAATACTTTTGCCCCATATGTAATAAATCATTTTACAGGAGATACTATTTGACGCTTGAAGATATTCCAACATTCACGAAAATATGTGTGCAGTGCAAGATACAACTCACCTGCTTTCATAAATTTAAGGAACAAGCTTTAAAAACGCATGAAAAATTGTTTGAAATCTCACTGGAAGATGATCCCGCCGAAGACTATCCCCATAGGAAAGATGAAGATGAATCAGATGACGCCATTTTAGTTGAATATGTTGACGATAAACAAGAATCTGAGATTCCGCATATTGACTCGCAGGCCAGTTTTATAGAAGGAACAGGCGAAACTGAGGAGCTAGTTCAGTCCATCGAGCATGTCTCCGACTTAGAAGATGATCATACAGAAAGTGAAGAGAGTGAATTTGATGAAACCAAATTCTTTGAATATTTAGATTCTCAGACTTGGAGAAGGAAACCACCTAAACACCTCAAAAAGAAACCCTcggaaaaaaactttaattttaaatgtgAGCGTTGCGGTAGAACATTTCTTGAGGAATTGGTATTTAATGCTCATCAAAATATGCATAATGGACTACCTGCCTATacCTGTTCAATATGCAGTAAGGAATACAAACGTAAGGCTGAATATTTATATCACATGAATAATCACAATAACATTAGAAACTACAAGTGTGAAACAtgtgaaaaaagttttattagcAATGGGGATCTGAAGCTGCACTTGCGATTCCACAATGATATTAAGCCTTATGATGATGATCCTCCAAGTTTTTTATGTAACGAATGTCTAGATACTCTAAAGTCTTTCCACATTTTCAAGAAACAATGTGAAAATTCATACATACAGTTAAAATTGATCCTAGATGAATGTACTGCTGAAATTACAAACGATACTTCAGAATTGGacgtatttttttatgaatgcGAATTGTGTAAAGAACAATTCACAAAATTTAACAAGCTTAAGGATCATCATAAAGTGAAACATCGCAAAAATGACATAAAATGCTCATCTTGTtcgaaaatttatattaaagttGGTGACCAAACAAAAACTCAATTACTAGACAACCAGTTACCATCAATAAATGATTGCAATGAATGTAAACCTTCAGATGAAGATCAACGAGATGATAGATCAAGTAAAAACGCCGATGGTGATAATATACCATGGCAGTATATGTGCAGCAGCTGTGCCCAGACATTCTCTTCTGAAGCTTTATTTAAAGAGCATTCATGCGATATTGCTTATATaaaaaatgagATCCCCTTAACCATAGAAGACTCTCAAGCGAATATCGATGCACGTGAAAACAGTGACGAAAACACCTTGGAAACTATTTCTCGTACAGAGTCTGTAGAAGAAGGTGGAGGTGATGAAAGGATCGATGATGATTCTGAAGGAGGCGAAGTGATTGATTGGAAGGCTGATGACTCGAGTGCTAATTCAGATACTAAAACGAAACCCCAAAAAGTCCAAGAAGATAAAAAACCTGAAAGAAAATACCGCAGAAGAAATCTCAATGATAAAGGAGACCATAATAAATGCTATATATGCAATAAGGTGTTTTCCCGTCACACTCATCTAAGGCGTCACTTCTTAACACACTCCGAAGATAAGCCATTCAGTTGTGAAGTATGCAGCAAAGGCTTCACTAGATTGGATCACTTAAATATCCATAGACACCATCATGCCGAAGTTAAGCCATTCAATTGTGATGTTTGTCAGCGTGGCTTTATACGTGCTGAACATCTTAAGAATCATAAAGAAGCTGTCCATGGTAACCGAGCGAATCTATTTAAGACAGAAGTTTGTGAAATATGTAAGAAGGCTTTTACTACAGCAAAATACTTGCAAATTCATATGCGAATACATGGTGAACGAACGTTTCCATGTAAAACATGCCCGGagaaatttaaaactaaaccaGAACTAACACAGCATATGAAGACACATGCCAATGAGAAGCCTTACCTTTGTTCAGAATGTGGATTAAGATTTGttagaaatgattatttagtTATACATATGCGAAGGCATAAAGGTGAAAAGCCGTATAAGTGCAAGTATTGTGGTAAAGGCTTTCCAAGAGCTACAGATTTAACAGTTCATGAAAGATATCATACTGGTGAGAAAACACACTTGTGCACGATATGCGGTAAGGGTTTCCAAAGAGCTTACAATTTACTAGTTCATATGAGAGTACATACTGGCGAAAGGCCATATCAATGTCCACATTGTTCAAAAAGTTTTGCCCAAGGCAACGATTTAAAGGCACACATTCGCCGTCATACTGGTGAACGTTTTAAGTGTGAACTGTGTGGTGATGGTTTTATACAAGGATATCATCTGACACAACACAAAAGAGTCGTTCATGGAATAGATATGAAATCGCACATACGACGAGTGCAGAAATTCACTACTACTGTCGATCAGGAACAGAAGACCCAAGACATACAGGATACTATTCAAGAAAATAAATCAAAGGACAATGAAACTGGAGATGAAGAAGGGCCCACAGCTGATTGTGTTGTTCCTGCAGCGACAgatcaaataaaaattgaatcggACAATATGGAAgttCAAACTATTAAAATAACACCGGAAATGGCAGAGGTACTACAAACTGATCAAGCGTTTACAATGGTATCATTTACAGATTTAGAAGGGAAAGTGAAATTTGAGTCTGCATATGATTAG
Protein Sequence
MENICRICMNGSGELISMVKEINLNTYEILTIGEKFEECFGLKLEDIPTLTKICVQCKIQLTCFHQFKEQALKTHEKLFEISLEDDPAEDYPHRKDEDESDDAISVEYLDDKQESEIPHIDSQASFIEGTGETEELVQSIEHVSDLEDDHTESEESEFDETKFFEYLDSQTWRSCSICSKEFRRKAEYLYHMNNHNNNRNYKCETCEKSFITNWDLKLHLRFHNDIKPFVCDICGRQFRIKSHLTYHLETHAEENQNECPICHQMYKTKTTLKGHMDTIHLRQKQYFCPICNKSFYRRYYLTLEDIPTFTKICVQCKIQLTCFHKFKEQALKTHEKLFEISLEDDPAEDYPHRKDEDESDDAILVEYVDDKQESEIPHIDSQASFIEGTGETEELVQSIEHVSDLEDDHTESEESEFDETKFFEYLDSQTWRRKPPKHLKKKPSEKNFNFKCERCGRTFLEELVFNAHQNMHNGLPAYTCSICSKEYKRKAEYLYHMNNHNNIRNYKCETCEKSFISNGDLKLHLRFHNDIKPYDDDPPSFLCNECLDTLKSFHIFKKQCENSYIQLKLILDECTAEITNDTSELDVFFYECELCKEQFTKFNKLKDHHKVKHRKNDIKCSSCSKIYIKVGDQTKTQLLDNQLPSINDCNECKPSDEDQRDDRSSKNADGDNIPWQYMCSSCAQTFSSEALFKEHSCDIAYIKNEIPLTIEDSQANIDARENSDENTLETISRTESVEEGGGDERIDDDSEGGEVIDWKADDSSANSDTKTKPQKVQEDKKPERKYRRRNLNDKGDHNKCYICNKVFSRHTHLRRHFLTHSEDKPFSCEVCSKGFTRLDHLNIHRHHHAEVKPFNCDVCQRGFIRAEHLKNHKEAVHGNRANLFKTEVCEICKKAFTTAKYLQIHMRIHGERTFPCKTCPEKFKTKPELTQHMKTHANEKPYLCSECGLRFVRNDYLVIHMRRHKGEKPYKCKYCGKGFPRATDLTVHERYHTGEKTHLCTICGKGFQRAYNLLVHMRVHTGERPYQCPHCSKSFAQGNDLKAHIRRHTGERFKCELCGDGFIQGYHLTQHKRVVHGIDMKSHIRRVQKFTTTVDQEQKTQDIQDTIQENKSKDNETGDEEGPTADCVVPAATDQIKIESDNMEVQTIKITPEMAEVLQTDQAFTMVSFTDLEGKVKFESAYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-