Tuni026562.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:199575313-199575928[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-07 8e-05 24.3 0.2 8 38 16 46 14 48 0.92
Sequence Information
- Coding Sequence
- ATGGCGTCAAATCGCAAGCTAAGAAAAACTGACCGTGGTGTCAATGCAATCAAAGCGATCAAAACTGAAGGTATGAGTATTCGATCAGCCGCTATGACCTACTCAATCGACAAAAGTAGTCTATCGCGTTATGTGAAGAAATTCGATGCAGAAGTTCCAGATATTTCGAAATTATCGGATGACAAAATGAAATCAATCATTCGCCGTATTGCATCGTATACGACACCAAAATTGGTTTTCGATGAAGAACAAGAAGAATCTCTTGTGCAATATCTTGTAAAATCCTGCAATCTTTATCACGGCCTGAGCATTACCGAGTTCAAACGCCTGGCATACGAATTTGCTCAAAAACTGAACGTCGCCTATTCAGAAAATTGGGATATTGAAAAAATGGCTGGAAAGACGTGGTACTACGGTTTTATGGAGCGACATAATAATTTATCGTTAAACACGCCCGAGCAAATAAGCCTGAGTCGAATAAAAACCTTTTGCAAGGGAAACGTTGATATATTCTTCGATCATTTGTGTGGCCTAATGGAAGATCAATAA
- Protein Sequence
- MASNRKLRKTDRGVNAIKAIKTEGMSIRSAAMTYSIDKSSLSRYVKKFDAEVPDISKLSDDKMKSIIRRIASYTTPKLVFDEEQEESLVQYLVKSCNLYHGLSITEFKRLAYEFAQKLNVAYSENWDIEKMAGKTWYYGFMERHNNLSLNTPEQISLSRIKTFCKGNVDIFFDHLCGLMEDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01430755;
- 90% Identity
- -
- 80% Identity
- -