Tuni002555.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- CATLJY010000324.1:19334-20338[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-12 1.9e-09 39.1 0.1 3 37 17 51 15 60 0.93
Sequence Information
- Coding Sequence
- ATGGTACGAACGTACAAAAAGAAAAGTTCGAGAGGCAGTTGGTCTGTAGAAAGCATGAAAGAGGCAATAGATGCAGTTTTAAGCAAAAAGGCGGGCTACAGAAAAGCAGCTCATCTATACGGTGTTCCACAGACCACATTGGAGCGTCACGTCGCCAAAACAAGGAAAGGCGAGCTGTCTCTTAACTCAAGTTCAGGTAACTTCAAACCCGTGTTTTCCAAACAAGAAGAAGAGGAGCTCGTGAGGTATGTTAAAGAAATGGAGAAACGTTTGTTTGGTTTAACCACTGTCGTCCTACGAAGGCTAGCATATCAGTTGGCGGAAAAAAATGCTAAGGCTCACAAATTTAACCATGATAAAAAGATAGCTGGCGTAGATTGGTTAAAAGGGTTCATGAAGCGTCACCCGGATTTATCCATCCGCAAACCAGAAGCTACATCGGCAGCTCGAGCAATGGGCTTTAACAAAGTGGCTGTGGATAAATTCTATTCTTTGCTCGGAGAAGTATATGACAAATATAATCTGACGCCAGATAGAATATATAATTGCGATGAGACTGGCATATCATGCGTTTCCAAAACAAAGAGCAAAATTATTGCAGAAAGGGGACGAAAACAGGTAGGCTCACTTTCTTCAGCGGAACGAGGACAGACGGTTACGGTAGAGGTATGTTTTAATGCAGCCGGAACTTACATGCCTCCCATGCTAATATTCCCTCGGCAGAGAATGAAGCAAGAGTTATTGGATCGAGCTCCTCCAGGGACGACGGCAGAATGCAACACTCGAGGCTGGATGACTACTGAGACGTTTATGACCTGGTTCCAACGGTTCGTCAAGTTTTCTGCTGCGTCAATAACTAACCCAGTGTTGCTTCTTCTAGATGGTCACGTAACGCATACGCAAAACATAGAGGTTATTGAAAATGCACGCAAGAATGGTGTTGTAATGCTTGCTTTCCCCCGCATTGCACCCACAGGCTCCAACCCTTGGATGTTAGCTTTATGA
- Protein Sequence
- MVRTYKKKSSRGSWSVESMKEAIDAVLSKKAGYRKAAHLYGVPQTTLERHVAKTRKGELSLNSSSGNFKPVFSKQEEEELVRYVKEMEKRLFGLTTVVLRRLAYQLAEKNAKAHKFNHDKKIAGVDWLKGFMKRHPDLSIRKPEATSAARAMGFNKVAVDKFYSLLGEVYDKYNLTPDRIYNCDETGISCVSKTKSKIIAERGRKQVGSLSSAERGQTVTVEVCFNAAGTYMPPMLIFPRQRMKQELLDRAPPGTTAECNTRGWMTTETFMTWFQRFVKFSAASITNPVLLLLDGHVTHTQNIEVIENARKNGVVMLAFPRIAPTGSNPWMLAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819989;
- 90% Identity
- iTF_00831107; iTF_00819989; iTF_01084185;
- 80% Identity
- -