Basic Information

Gene Symbol
pnr
Assembly
GCA_963855945.1
Location
OY979698.1:95705161-95713072[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-17 1.2e-12 48.9 3.7 1 35 569 602 569 603 0.97

Sequence Information

Coding Sequence
atgTGTAATGTaccacaaaaattttaccaacTTTGTCGCCTGTGCTTGTCAGTGGTTAATGACTGTGATCTCGAGAAACTCTCACTGTTTACATCttccaaaacagaagaagcagcgacaaataatataaataatattgaaaaccgTGTGCCTATTGAGGAGGAATACCGTGCAGCAGAAAAATTCAATAATCGAGCATCATCAATAATTGCTGAGCTGCAGGGAAATTGCAGCAAGGAAACTGATTTTCAGAAAGCTTTCAGTGATTTGGttaaaaagaaaggaaattacGATGATCTCGTCAGCGATTGCGAAAGAGGTGGAAAGAATGAATCATCGAGCACTAGCATCTCGGAGCGTATATTCATATGCCTCTCAATTAAGATTTCTCCCGATGACAATTTACCAACAGTTATTTGCGAAGAATGTAGAGGCTTATTGGATGCCTGCTTTAGATTTCGAACAATGGCTAAAGAAGCACAAAGAGCCTTACAAAGTTTTTTACACTTTACATCAAATCTTTCAGGTAATCCAAAGgaAAATTATACCAAATCATCAAACACTTTGGATGAATTGCTCTCTCCGTCATCGATACGTGAAGCATCGGAAAGAATGGCAGCAACAGCATTAACAGAATTAAgcaatacaacaaaaaataataacaaaatgcCAATAGTTAATTGTTTTGAAGaagatataaataaaacaaatgtaTTATCAATACCACAACAGAATAATCATGttgaagaaaatgttgtatCTGTGATTCCTATCATAAAATCTGACACAAATATAAATCCATACAGTATATATGAAACAAAAGACAATGTACTCACTCCAAGCTCGAATTCAGCTAATATTAAACTTCAATCAGCTAAAACATTAACGCAATTACATCAACAATTAGAAACAGCTGCTGTTTTAATGGATATTAGTAAAAAAGCTATTATATCACCACCCAGCTCTAATCCACAATCTCCAAGTCTTGGAACTTCTTATGCTGATTCAAGTATTAACAATTCTGTGATAAATACCAAGCACTCAGAAGAAATGGATTTATCTGTAAAACGATTACGATTGCAAACAACTAGAGTAAGAAAATTAGATGATCCGTTAGTGCATACGAATAATGATTTGCATATTATAAAACGTGAAAATAGCAGAGATAGTTATTCAGATGATAGCTCAGATTCGGGTCGATTACAAGTTGATGTTGATGAAAAATATGTTAATCCTATACAGAGCTGTAATAATCCGGGTAGAGAAACACCAGAAAGTATTACGTCTGAAGATCATGGCACTGATCCAGCTACTACACAATTATGGCAAGCTTTAGCACATACCACAGTTAATGGAACCGACAAGGATGCGTCACAATTACTTAAACGAATGATTGATTGCCGATCATTTGGATTTCCAGTATCATCTTCACTTACCATTGAGCCTAGTAATCATTCTTTAAATCAGCCAATTGCTTTAGTTAAGaaTGAAAactcttccgattatttatctGGTAAATCGGGACGTCGAAAGCAAGCTTGTCCTAGTAAATCTAATAATCTTAAAATGGAAGACGCTTCTATTTCGGATAATCAAAATTTACCATCAGAAAATATGAATTCTGCTCAATGGCAGAGCATGATAGTGGATGAGAAACTCAAGGGGAAAATATCAAATGCGGGTAATCTGCACAAAGATATGTCGTGCACCAACTGTGGTACACTGACAACAACCATATGGCGTCGTAATGTTAAAGGAGAAATGGTTTGCAATGCATGTGGCTTATACTTTAAACTTCATGGTGTAAACCGTCCGCATTCAATGCGAAGGGATACTATTCACACAAGAAGACGTCGACCAAAAGGCGGTGAAAAATCAAGCAGAAGAAGAAATAAACCGCCCAATCCAACTGGCGGAGAAAGTAATGAAATTGAAGCGAAAACATCAAATTCTGATCTTCATTCATTACAAAGTCATAATTTTCTTATGGCCTTAGGTAGTGTAGCACAAAACGCGAGTACGTTTACAATGCCACATTATTCACATTTTTTACGTGCCTCCCAAAGTTTTGCAAAATCAAATAATGATTCTGAGggtattaaaaaagaattaattgaaAACGAAAACGAGAATGGTATAGAAGGTTGCAGTTTACCATTAAATCTAGTTTCAAGTGAAACAGTTTCAGAATATCAAACTAATCAATAG
Protein Sequence
MCNVPQKFYQLCRLCLSVVNDCDLEKLSLFTSSKTEEAATNNINNIENRVPIEEEYRAAEKFNNRASSIIAELQGNCSKETDFQKAFSDLVKKKGNYDDLVSDCERGGKNESSSTSISERIFICLSIKISPDDNLPTVICEECRGLLDACFRFRTMAKEAQRALQSFLHFTSNLSGNPKENYTKSSNTLDELLSPSSIREASERMAATALTELSNTTKNNNKMPIVNCFEEDINKTNVLSIPQQNNHVEENVVSVIPIIKSDTNINPYSIYETKDNVLTPSSNSANIKLQSAKTLTQLHQQLETAAVLMDISKKAIISPPSSNPQSPSLGTSYADSSINNSVINTKHSEEMDLSVKRLRLQTTRVRKLDDPLVHTNNDLHIIKRENSRDSYSDDSSDSGRLQVDVDEKYVNPIQSCNNPGRETPESITSEDHGTDPATTQLWQALAHTTVNGTDKDASQLLKRMIDCRSFGFPVSSSLTIEPSNHSLNQPIALVKNENSSDYLSGKSGRRKQACPSKSNNLKMEDASISDNQNLPSENMNSAQWQSMIVDEKLKGKISNAGNLHKDMSCTNCGTLTTTIWRRNVKGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGGEKSSRRRNKPPNPTGGESNEIEAKTSNSDLHSLQSHNFLMALGSVAQNASTFTMPHYSHFLRASQSFAKSNNDSEGIKKELIENENENGIEGCSLPLNLVSSETVSEYQTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01432688;
90% Identity
iTF_01432688;
80% Identity
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