Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979697.1:9290691-9295096[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.033 8.1 8.8 3.2 1 23 202 224 202 224 0.97

2 9 0.00053 0.13 14.5 0.3 1 23 248 270 248 270 0.96

3 9 4.8e-07 0.00012 24.1 1.4 1 23 283 305 283 305 0.96

4 9 0.0017 0.42 12.9 1.2 1 23 333 355 333 355 0.96

5 9 2.7e-06 0.00065 21.7 2.0 2 23 371 393 371 393 0.96

6 9 0.087 21 7.5 1.4 1 23 421 443 421 443 0.96

7 9 0.4 98 5.4 4.8 2 23 514 535 513 535 0.96

8 9 0.12 29 7.1 0.2 1 14 544 557 544 568 0.83

9 9 0.28 67 6.0 0.0 2 13 581 592 580 596 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.033	8.1	8.8	3.2	1	23	202	224	202	224	0.97
2	9	0.00053	0.13	14.5	0.3	1	23	248	270	248	270	0.96
3	9	4.8e-07	0.00012	24.1	1.4	1	23	283	305	283	305	0.96
4	9	0.0017	0.42	12.9	1.2	1	23	333	355	333	355	0.96
5	9	2.7e-06	0.00065	21.7	2.0	2	23	371	393	371	393	0.96
6	9	0.087	21	7.5	1.4	1	23	421	443	421	443	0.96
7	9	0.4	98	5.4	4.8	2	23	514	535	513	535	0.96
8	9	0.12	29	7.1	0.2	1	14	544	557	544	568	0.83
9	9	0.28	67	6.0	0.0	2	13	581	592	580	596	0.88

Sequence Information

Coding Sequence: ATGTCAAACTTTGGAATTACCGGCATACCAGTTAGAAaccctaaaaataaattatgccGTACATGCTTAAAGCAACATTTCGACATGAAATCCATCTTTAATTCGGAAGTTAATTCCGTACCAGTATATCAGATGCTCTATGCGGCTATACCTATTGAAATAAAGGCAGACGATGGCCTGCCTGGCCACTTATGTTCGCAATGCATTCAAAGTTTAATAAATGCTTACAAGTTCCAGAAAATGTGCATTAATAATGACTTCAAGCTACGAAACTACATCACGGTTTTTCATTCCAATCCAGAAACTAGCGAAGATGCAACTATCAACTTTGAACATATGCCTTCTGTGGATTCAACAAACGACAAAACCGAAGTCTATGAGGAAGCAGGTGACGCGGAGCTAGTTGTGAAGTTTGAGTCTGATGATGACGGTTTGGAGCCGGATGAACAGCCCATTGAACAATTGCAAGATGCTTCTATGCCAGATgtgaatgcagaaaaattacagtCGTTTGGAACATTGGCATGGTCTTCGGACAACGATGCTATTCAATTAGATGAGCGTGATTACTTCAGTCAAGAACAAAATGAATGCAATGATTTATTCTGTTGCAGTATTTGTTATGCACGATTTGAAACAAGGGAATTTTACGATAGTCATATGCAGATGCATGGAACAAAATCTCGTCAGTTACCGAAAACGGTTGAAAGGAAACTGGAAAATCCTGTGCTAAAAACCGTTTATCTTTGTAATATTTGCAAAACTGCATTTGGAACAGAAGATATGTTAAATTTGCACAAAAAGGTTCATGAACGTCCAAGtaaaaattccAACGATAAATCCTCACATGTTTGCAATATTTGCAAGAAGACCTTCAAAACATGGGAAGAATTAACACAGCATATAAGTGAACATCAAATCAAGATTCTGTATGGCACTGAACAGGGatCAAATACAACCGTAAATGTCAACGTTAATATTCAAACAGAGAAAACATATGAATGTAAAACATGCCATAAAAGCTTTAATGGAGGAGAAGAGTTAAGCTTACACGAGAAAGAACATATCGCTACAGAtcGAAAAAAGGCAGCTGCTGCAAAAGAGTTAAATCGATGTAAATATTGCAGGAAGGTTTTTAGTAACGGCAGCAATTTAAGACGGCATGTGAGACTTCAGCACCCTGGTATCGATCCACCTAAGGATCCACTACAAATTGATGATGAATTGATccCAGTTGTTGAACAACTGAAAAAGATTGTTTATATATGTGAAGTTTGTGATCATGAATTTGAAGAGAAAACTGTTTTCTTGacacataaaaaattacatttgaTTGAAGAAATTCTAAATGAAAAACAGGAAGACAAATCCCTAACACCACAGGTTGAAactataaaattatctaaggaTACAGATGACTTCAAAATTGTATACTCAGTCCCCAAACTAGAAACACATCCAAAGGAAGCTGATAAGGTATCAAAGGTAGAGCCTACTTACACAGAAAAGAGtttaaagATAGAACAAAAAGGGGAAATCAAATGTTTAATATGTTTGAGGAAATTTACCCATCGTAAAAATATGCTTTGTCACATCCAAGTGCATAAATTAACattcaatggaaaaaattatgcGTGTTCTATATGTAAAGAGGTATTTTCTTCAATATCTGAAAAAGAACTTAAAGATCACAATGAAAAACACGCAATACAAGAACCAGAACCTGATGTACCCAAAATTCAGTGTCTGCTTTGTCcaagaacatttaaaaatcGCGCGTTTATGATCTCAACGCATCTTCCTAAGCATAAgtaa
Protein Sequence: MSNFGITGIPVRNPKNKLCRTCLKQHFDMKSIFNSEVNSVPVYQMLYAAIPIEIKADDGLPGHLCSQCIQSLINAYKFQKMCINNDFKLRNYITVFHSNPETSEDATINFEHMPSVDSTNDKTEVYEEAGDAELVVKFESDDDGLEPDEQPIEQLQDASMPDVNAEKLQSFGTLAWSSDNDAIQLDERDYFSQEQNECNDLFCCSICYARFETREFYDSHMQMHGTKSRQLPKTVERKLENPVLKTVYLCNICKTAFGTEDMLNLHKKVHERPSKNSNDKSSHVCNICKKTFKTWEELTQHISEHQIKILYGTEQGSNTTVNVNVNIQTEKTYECKTCHKSFNGGEELSLHEKEHIATDRKKAAAAKELNRCKYCRKVFSNGSNLRRHVRLQHPGIDPPKDPLQIDDELIPVVEQLKKIVYICEVCDHEFEEKTVFLTHKKLHLIEEILNEKQEDKSLTPQVETIKLSKDTDDFKIVYSVPKLETHPKEADKVSKVEPTYTEKSLKIEQKGEIKCLICLRKFTHRKNMLCHIQVHKLTFNGKNYACSICKEVFSSISEKELKDHNEKHAIQEPEPDVPKIQCLLCPRTFKNRAFMISTHLPKHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -