Basic Information

Insect: Thereva nobilitata
Gene Symbol: YY1
Assembly: GCA_963855945.1
Location: OY979694.1:86538641-86539810[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3.4e-05 0.0083 18.3 2.9 3 23 202 224 200 224 0.94

2 5 1.4e-06 0.00035 22.6 0.5 1 23 229 251 229 251 0.96

3 5 7.2e-06 0.0018 20.4 1.7 1 23 257 281 257 281 0.98

4 5 3e-06 0.00073 21.6 0.3 1 23 287 311 287 311 0.97

5 5 4.5e-06 0.0011 21.0 0.8 3 23 344 366 342 366 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3.4e-05	0.0083	18.3	2.9	3	23	202	224	200	224	0.94
2	5	1.4e-06	0.00035	22.6	0.5	1	23	229	251	229	251	0.96
3	5	7.2e-06	0.0018	20.4	1.7	1	23	257	281	257	281	0.98
4	5	3e-06	0.00073	21.6	0.3	1	23	287	311	287	311	0.97
5	5	4.5e-06	0.0011	21.0	0.8	3	23	344	366	342	366	0.95

Sequence Information

Coding Sequence: ATGGATCGTGACGAACCTGTAGATATAGAAAACTTAAGTGGCGTTGAAAAATACGATTACTACGAAGTTTGTCTTGATGAAGCTGACGGTGGGCCTTTTAATCAACCAAATGGCGAAGAAGCATTATTTTTATCATCAGATATGGATAATGTTTTCATATCAGAAGAAGTAGTTTTACAGCCAGAATATACGATGCCAGAACATGAAGAAGTTTTAGATATCTCGGGGCAGCCCTTAACTGCGGACAATTTAACATCGTCTATTATTTGTGAAGACTCGCTTGATATTAAACCAGATGTTGAGGACTTAGAAGATGAGAAGGTTTCGCAGAATGATTCAAATAAGTCAAGGAATTGGGAGATTAAGGAAGTTAAGTTGAAAACACTAGAGGGAGAGTTCACCGTTTCATTGTGGTCGCCCAGTCCTACAACGTTTATTAAGCTCGAACCTGAATTAGAAACTGTGATAGAACATATTGGGGAAGAAGAAAGCAACGATGTGATAGTTAAAAGTGAGACGCCGGGTCCAAAAACTAAACATCAGAAAACTCGAGCTAAATCAACACCAGTTGCTACAAATGATACTGTTGAACGTACAATTCCTTGTCAGTATTTccactgcaaaaaactgttccGTGATAAATCTGCCCTACGCAAGCATCTTCAGACTCATCAGCCTCGAAATCATATTTGTGCTGAGTGTGGGAAAGCTTTTGTTGAAAGTTCTAAGCTTAAACGACACCAGCTTGTTCATACCGGCGAAAAACCATTTCAGTGCACTTTTGATCAATGCGGTAAGCGGTTTTCTTTGGAATTTAACTTAAGGACACACCTTAGAATTCATACAGGCGATAGGCCTTATATTTGTCCTGTTTATGGTTGCGACAAAAAGTTTGCCCAATCAACAAATCTTAAGTCTCATACTTTGATACATGCAAAGAAAAACAACTTGTCCTGTGGTGTAATTTCCCAGCCTAAAATCAAAACCGAAACTTCACTATCGTTGGATAATGGCAACAAGCTTGTAATCTGCCCGTTCAGCCATTGCGGGAAAAAATTTCCCAGCAAATCAAGCCTCAAAAATCATGCTTTAATACATGTCATCACCGATACATCTTTGCCATCTGACTCGGACCAATCCATGGAGTTTCAAGAGCATGACTGGAAATGA
Protein Sequence: MDRDEPVDIENLSGVEKYDYYEVCLDEADGGPFNQPNGEEALFLSSDMDNVFISEEVVLQPEYTMPEHEEVLDISGQPLTADNLTSSIICEDSLDIKPDVEDLEDEKVSQNDSNKSRNWEIKEVKLKTLEGEFTVSLWSPSPTTFIKLEPELETVIEHIGEEESNDVIVKSETPGPKTKHQKTRAKSTPVATNDTVERTIPCQYFHCKKLFRDKSALRKHLQTHQPRNHICAECGKAFVESSKLKRHQLVHTGEKPFQCTFDQCGKRFSLEFNLRTHLRIHTGDRPYICPVYGCDKKFAQSTNLKSHTLIHAKKNNLSCGVISQPKIKTETSLSLDNGNKLVICPFSHCGKKFPSKSSLKNHALIHVITDTSLPSDSDQSMEFQEHDWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432535;
90% Identity: iTF_01432535;
80% Identity: -