Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979694.1:4205069-4206181[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.009 2.2 10.6 4.6 1 23 125 148 125 148 0.97

2 8 0.88 2.1e+02 4.4 3.5 1 20 152 170 152 173 0.89

3 8 2.3e-08 5.5e-06 28.2 0.4 2 23 179 200 178 200 0.97

4 8 0.0019 0.47 12.7 2.5 1 23 206 229 206 229 0.98

5 8 1.1e-06 0.00027 23.0 5.7 1 23 235 257 235 257 0.97

6 8 1.8e-05 0.0044 19.1 4.5 1 23 263 285 263 285 0.98

7 8 1.1e-05 0.0027 19.8 0.5 2 23 292 313 292 313 0.97

8 8 1.8e-06 0.00043 22.3 0.6 1 23 319 341 319 341 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.009	2.2	10.6	4.6	1	23	125	148	125	148	0.97
2	8	0.88	2.1e+02	4.4	3.5	1	20	152	170	152	173	0.89
3	8	2.3e-08	5.5e-06	28.2	0.4	2	23	179	200	178	200	0.97
4	8	0.0019	0.47	12.7	2.5	1	23	206	229	206	229	0.98
5	8	1.1e-06	0.00027	23.0	5.7	1	23	235	257	235	257	0.97
6	8	1.8e-05	0.0044	19.1	4.5	1	23	263	285	263	285	0.98
7	8	1.1e-05	0.0027	19.8	0.5	2	23	292	313	292	313	0.97
8	8	1.8e-06	0.00043	22.3	0.6	1	23	319	341	319	341	0.98

Sequence Information

Coding Sequence: ATGGATTGTGGCGATACGAAATGTTGCAGAGCTTGCTTAAACCCAGATTTCGGAAATATAAAAGAACTAAACGAAATTTGGAATAATGACCTGACATTTCTAGACCTTATTAAATTTCTATTGGGAGCCGCCGACACTCAGGAGGAATGCCCCGAATTTATATGCGAATCCTGTGAAACAAAACTTGTTAATGCTTATCTCTTTAAGATCCAATGCTTGGAATCAGAAAGAAAGTTCAGCGAAAGTCATGCAAGACAACAGACGGAAATACTAGATGTGGTGAAAGTCGAACCCACAGTAGAGGATACAGCCGTCGAGCTAGAGGAGATTGTAGATGTTAAGAATTATGAATTAAACGAAGAAGACAGTAAATACAGCTGCTTAAAATGCAAGCTTAAATTTGCATCATGTAAGGAGTATCAAAGTCACTACAGAAATGTCCATCGTGAGAAACATGTTTGTTCAGAATGTGGAAAACTAGTGGCTCGTCATAATCTCGAAAAGCATCAGCTATGCCACTCAACTCCAGCGCAAACCTGTGAGGAATGTGGCAAAACGTTTACGCTTCCAGAAAATCTTAAGAAGCACATCCGAATACACAATCGTGACCAGAGATACGTTTGTGAATATTGCGGCCGGAAGTTTCTCCATTGGAACAGTAAGCGGTATCATGTTAGGACAGTTCATACAGGCGAAAGGACCCACGAGTGCAGTTACTGTGGGAAAAAATTCGCACATAGCAGCAACTACTTAAGACACTTGCGATATCACACCGGGGATATGTTTCACCAATGTATGCAGTGCAAGAAGAAATTTAACACAACATCGGAGCTAAGAAATCATATGGTGACCCACACAAAGGAGAAGAATGAAGTTTGCGAAATATGCAGCAAGGCATTTGGAACACGTAAGGGGCTCCGCAGTCATCTGAAGACACACAGTGGAGAACGTAACTATATTTGCCCAGTTTGTGACAAGGCGTACACTCAGGCGCATGTTTTACGTTCTCACTTAAAAACCCATGAAGATTATCCAATGCCGCCGCCTGGAACTATATTGTCACAGAAGACTCCAAAGCGAAAAGTGAAAGAAGAAATATTGGTGGCAAgttga
Protein Sequence: MDCGDTKCCRACLNPDFGNIKELNEIWNNDLTFLDLIKFLLGAADTQEECPEFICESCETKLVNAYLFKIQCLESERKFSESHARQQTEILDVVKVEPTVEDTAVELEEIVDVKNYELNEEDSKYSCLKCKLKFASCKEYQSHYRNVHREKHVCSECGKLVARHNLEKHQLCHSTPAQTCEECGKTFTLPENLKKHIRIHNRDQRYVCEYCGRKFLHWNSKRYHVRTVHTGERTHECSYCGKKFAHSSNYLRHLRYHTGDMFHQCMQCKKKFNTTSELRNHMVTHTKEKNEVCEICSKAFGTRKGLRSHLKTHSGERNYICPVCDKAYTQAHVLRSHLKTHEDYPMPPPGTILSQKTPKRKVKEEILVAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432504;
90% Identity: iTF_01432504;
80% Identity: -