Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979694.1:235805968-235807525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7.9e-05 0.019 17.1 0.2 1 23 137 160 137 160 0.93

2 7 6.1e-05 0.015 17.4 2.3 1 23 169 191 169 191 0.98

3 7 2.4e-05 0.0057 18.8 1.4 1 23 198 220 198 220 0.95

4 7 1.7e-07 4e-05 25.5 1.0 1 23 226 248 226 248 0.99

5 7 2.2e-05 0.0054 18.8 5.9 1 23 255 277 255 277 0.98

6 7 4.2e-05 0.01 18.0 0.9 1 23 283 305 283 305 0.95

7 7 5.9e-05 0.014 17.5 0.3 1 23 311 333 311 333 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7.9e-05	0.019	17.1	0.2	1	23	137	160	137	160	0.93
2	7	6.1e-05	0.015	17.4	2.3	1	23	169	191	169	191	0.98
3	7	2.4e-05	0.0057	18.8	1.4	1	23	198	220	198	220	0.95
4	7	1.7e-07	4e-05	25.5	1.0	1	23	226	248	226	248	0.99
5	7	2.2e-05	0.0054	18.8	5.9	1	23	255	277	255	277	0.98
6	7	4.2e-05	0.01	18.0	0.9	1	23	283	305	283	305	0.95
7	7	5.9e-05	0.014	17.5	0.3	1	23	311	333	311	333	0.98

Sequence Information

Coding Sequence: ATGCGAAGCAATGAGACGGAAGGAAAACGCCTTGGCGGCCATCTTTatGTTCCGTACAAGCAAATTATGGAGCACACTTCTGAGGTCAGCAACGGCAGTACTGTTATGGATCACCAAGAGATAAGTCTGCATACACGAGCGGATTCTGAAGAATCAAGTTTAAGTACTACGTTTTTAGAATCGGAAGACAGCAGTGAGCCAGATCCAATTTCATTATCGCCATTAAAAGAACGAACAGTGAAACATCGAAAGAAAGTCCCAAAAACTTATGATAACATGCAAATAGTTAAACGCGTTGGGGAAAAGTACGTATGTCTGCTATGCAACTTAACAGAAGGAAAAATCTCTTATGAATTTGATGCTAGAACTGTAGCAATACATGTAAAATCGGTACATAATCAACGCGTTTACATCTGCGATCTTTGTGGTGAAGATTTCCGTAAGCGAAACTATCTAACTGAACACATGGACGACGAACATGGCGGCAGCACCGAAGATGGCGAATATCAATGTGAAACTTGTAATCGAATTTTTAGAAATTTGCGATTGTTTCGCATTCATAAGAGGCTCCACTACAGCTCTTTGAAATCATTCCTCTGTGTTCAGTGTAATAAGAAGTATAGCTCTAAGAATTTGTTAAATGAACATATGAACATGCACACAGGTCAACGACCTTACAAGTGCACATATTGTCCAAAGGATTTTGCCTCTAAATATACCTTGACCGcacatttaaaaattcatacCGACAGACCCCGCTCGTTTGTTTGCAAAGATTGCAAAAAAGCATTTTTCAGCGCACACCATCTGCTGCAGCATAGGAAGACGCATTCTGGCGTAAAAGAGTTCATTTGTGGATTTTGTAAAAAGGCGTTCGTTTCTCAACACAATTTAGAAGTTCATAAAGTCGTTCACACTGGCTATAAGCCCTTTATATGCAGAACTTGTGGCAAAGCGTTTGCAAAGCGTGCTGAGATCAAAGATCATGAACGGACGCATACAGGAGAAAAACCGTTTACTTGTGTCATCGAGAAACTTGAGATAGAACGATGGGAAGATGGCAGCAGTGACGAGGAGAATTTCCTGAACCGAACAATGAAATGTAGAGTTGACTGCTCATCCAAAAATCACACCTAA
Protein Sequence: MRSNETEGKRLGGHLYVPYKQIMEHTSEVSNGSTVMDHQEISLHTRADSEESSLSTTFLESEDSSEPDPISLSPLKERTVKHRKKVPKTYDNMQIVKRVGEKYVCLLCNLTEGKISYEFDARTVAIHVKSVHNQRVYICDLCGEDFRKRNYLTEHMDDEHGGSTEDGEYQCETCNRIFRNLRLFRIHKRLHYSSLKSFLCVQCNKKYSSKNLLNEHMNMHTGQRPYKCTYCPKDFASKYTLTAHLKIHTDRPRSFVCKDCKKAFFSAHHLLQHRKTHSGVKEFICGFCKKAFVSQHNLEVHKVVHTGYKPFICRTCGKAFAKRAEIKDHERTHTGEKPFTCVIEKLEIERWEDGSSDEENFLNRTMKCRVDCSSKNHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -