Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979696.1:129560994-129562793[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00055 0.13 14.4 0.5 2 23 16 37 15 37 0.97

2 17 0.15 36 6.8 0.6 1 23 87 110 87 110 0.94

3 17 1 2.5e+02 4.2 5.7 2 23 130 151 129 151 0.96

4 17 0.00047 0.11 14.7 0.3 1 23 165 187 165 187 0.96

5 17 0.016 3.9 9.9 4.8 1 23 193 215 193 215 0.98

6 17 0.085 21 7.6 0.1 2 23 225 247 224 247 0.92

7 17 0.0029 0.72 12.2 0.1 1 22 256 277 256 280 0.91

8 17 0.0001 0.024 16.8 2.5 1 23 286 309 286 309 0.97

9 17 0.079 19 7.7 1.8 1 23 313 336 313 336 0.95

10 17 6 1.5e+03 1.7 1.1 1 23 336 358 336 358 0.92

11 17 0.07 17 7.8 6.9 2 23 367 389 366 389 0.93

12 17 0.00028 0.069 15.4 1.1 1 23 391 413 391 413 0.91

13 17 0.14 33 6.9 1.2 3 23 421 442 419 442 0.94

14 17 0.0041 1 11.7 1.8 2 23 487 509 486 509 0.95

15 17 3.6e-05 0.0087 18.2 0.9 1 23 516 538 516 538 0.96

16 17 0.00088 0.21 13.8 0.5 2 23 547 568 546 568 0.93

17 17 0.0012 0.3 13.3 1.2 1 19 574 592 574 595 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00055	0.13	14.4	0.5	2	23	16	37	15	37	0.97
2	17	0.15	36	6.8	0.6	1	23	87	110	87	110	0.94
3	17	1	2.5e+02	4.2	5.7	2	23	130	151	129	151	0.96
4	17	0.00047	0.11	14.7	0.3	1	23	165	187	165	187	0.96
5	17	0.016	3.9	9.9	4.8	1	23	193	215	193	215	0.98
6	17	0.085	21	7.6	0.1	2	23	225	247	224	247	0.92
7	17	0.0029	0.72	12.2	0.1	1	22	256	277	256	280	0.91
8	17	0.0001	0.024	16.8	2.5	1	23	286	309	286	309	0.97
9	17	0.079	19	7.7	1.8	1	23	313	336	313	336	0.95
10	17	6	1.5e+03	1.7	1.1	1	23	336	358	336	358	0.92
11	17	0.07	17	7.8	6.9	2	23	367	389	366	389	0.93
12	17	0.00028	0.069	15.4	1.1	1	23	391	413	391	413	0.91
13	17	0.14	33	6.9	1.2	3	23	421	442	419	442	0.94
14	17	0.0041	1	11.7	1.8	2	23	487	509	486	509	0.95
15	17	3.6e-05	0.0087	18.2	0.9	1	23	516	538	516	538	0.96
16	17	0.00088	0.21	13.8	0.5	2	23	547	568	546	568	0.93
17	17	0.0012	0.3	13.3	1.2	1	19	574	592	574	595	0.85

Sequence Information

Coding Sequence: ATGGATGAGCTAAATTTACAAATAACCGATGTTTCTTCTACTTCATCCTGTGATGATTGTGGCGAATTGTTTGAAACTGTCCAACAACTTTACAATCACAGAAGAAAGCATTTTGTGCATTATGCACACTTTTGTCGatcacattttaaaaaattgaattattgcccgttttgtttatttaaggtTGAATATCACGAAAACGAGGATTTTGATCATGTGGAAATTGTTAAAGTAGATAAGAAATTGAACATAGCTTCTTTTGAATGTTCGATGTGCTCTACAAAAACACAAACTATTGTTTCTCTAACAGATCATTATAAAGATGATCATTTAATGAATTTCCCGTACTTTCCGCTAATGGAAACATCAAATAGAGAATCCGAATTAAAATGCAACATTTGCCTAAAGACGTTCTTGAGTTCCTGCTGTCTGTCTAGtcataaaaatattcatataccAAAAGCTATCCCTAATAATCCTGATTTGAAACTATTTAAGTGTGAAGTATGCCCAAAAGAATTTTCAACCAATGTTTTGGCTCTTGATCATCaattctctcattcaactgCAAGACTTTTTCGTTGTTTCATGTGCAGATgtgattttaaatttatgtcGACATTAAGGAATCACATAATAATGCATGCACAACGTTACGGAAAGGATTCATTAATCTGCGGATTTTGTAGCAAGATGTTCATTTCGCCGTCTGGAGTGGAATTTCATATTAATAAAGTTCATTCAAAAGAAATACGCCATACAATATATACATGTGATATTTGCGATGAATATTTTGTATCAAAATTAGATTGGGATAATCATATGATAAAAACAATTCATGATGGCGAAGCGAAATTTCAATGTGATGATTGTAATACGAGttttaaatttaagaaattaattcGTAAACACTTAATACGTAGCCATTTAAATTTATATGAATGCATTTATTGTTTTAAGAATTTCAATACAATGCATACATTAGGATTGCACATAAATATAAGGCATAAATGCATTTTTTGTCCAAATACATTTATGGCAGCGAGAAAATTAAGTTTACATACTCGTGAACATTTCAAAGATAATCCACAAAAATTATGTTGCTGCTACTGCGATactgaatgtaaaacaaaaaatgaatatGTTAAACATATGAAGGGTGGACATTCATTTCAATGTAATGCATGCCCAAAGAAATTTTCGAATGAAGCACATTTAATTAGCCATTCATATGCACATAGGCGAACAGAAGAAATTAAttgtaaattatgtttaaattatttttataaaaataaattatttattaagcaCATGAAGGAAGCACATAATGATATTATCATTACCGACCCATTAATAAACGAGAAAAATCATACTGACAACAACACTTTAAATAATGATGATGTCGATAATAATAAACCATTACTAATATTTAGCAATCATCCAAATGGTGCTGgattatattgtaaaatttgtaaaagaaaatttcgtgtattcttaaaattacaaaaacatgttctaaaaattcacttaaaattaaaaaagaattacttATGTCAAATATGTAATAAGAATTTCAAAACTCGCGGTGCAATTACAACTCATATTAAGAGTCATGAACGTATGAATTTAAATGTTATTTATTGTGAAGTATGTTCAAAACAGTTTAGCTCATCGCAAGCCTTAAAAGAACATTCAGTAAAACATACTGGAATTAAGCCATATGTTTGCCAATATTGTGGGAAATGTTTCGCAACATCAGGTGTTACATATCGTCATGAAAAGATATGTAAATTTAAGTAG
Protein Sequence: MDELNLQITDVSSTSSCDDCGELFETVQQLYNHRRKHFVHYAHFCRSHFKKLNYCPFCLFKVEYHENEDFDHVEIVKVDKKLNIASFECSMCSTKTQTIVSLTDHYKDDHLMNFPYFPLMETSNRESELKCNICLKTFLSSCCLSSHKNIHIPKAIPNNPDLKLFKCEVCPKEFSTNVLALDHQFSHSTARLFRCFMCRCDFKFMSTLRNHIIMHAQRYGKDSLICGFCSKMFISPSGVEFHINKVHSKEIRHTIYTCDICDEYFVSKLDWDNHMIKTIHDGEAKFQCDDCNTSFKFKKLIRKHLIRSHLNLYECIYCFKNFNTMHTLGLHINIRHKCIFCPNTFMAARKLSLHTREHFKDNPQKLCCCYCDTECKTKNEYVKHMKGGHSFQCNACPKKFSNEAHLISHSYAHRRTEEINCKLCLNYFYKNKLFIKHMKEAHNDIIITDPLINEKNHTDNNTLNNDDVDNNKPLLIFSNHPNGAGLYCKICKRKFRVFLKLQKHVLKIHLKLKKNYLCQICNKNFKTRGAITTHIKSHERMNLNVIYCEVCSKQFSSSQALKEHSVKHTGIKPYVCQYCGKCFATSGVTYRHEKICKFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -