Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979694.1:64710267-64716263[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00036 0.087 15.0 0.6 2 23 265 287 264 287 0.97

2 10 0.38 92 5.5 0.1 6 23 296 313 296 313 0.99

3 10 0.00013 0.031 16.4 0.6 1 23 319 341 319 341 0.98

4 10 0.003 0.74 12.1 0.1 1 23 349 371 349 371 0.94

5 10 4.4e-06 0.0011 21.0 0.8 1 23 379 402 379 402 0.96

6 10 3.5e-05 0.0085 18.2 1.4 2 23 409 430 409 430 0.97

7 10 0.02 5 9.5 0.9 2 23 437 458 436 458 0.97

8 10 7.2e-06 0.0017 20.4 0.4 1 23 465 488 465 488 0.96

9 10 0.021 5.1 9.5 0.4 1 23 494 516 494 516 0.94

10 10 4.7e-05 0.012 17.8 1.3 1 23 522 545 522 545 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00036	0.087	15.0	0.6	2	23	265	287	264	287	0.97
2	10	0.38	92	5.5	0.1	6	23	296	313	296	313	0.99
3	10	0.00013	0.031	16.4	0.6	1	23	319	341	319	341	0.98
4	10	0.003	0.74	12.1	0.1	1	23	349	371	349	371	0.94
5	10	4.4e-06	0.0011	21.0	0.8	1	23	379	402	379	402	0.96
6	10	3.5e-05	0.0085	18.2	1.4	2	23	409	430	409	430	0.97
7	10	0.02	5	9.5	0.9	2	23	437	458	436	458	0.97
8	10	7.2e-06	0.0017	20.4	0.4	1	23	465	488	465	488	0.96
9	10	0.021	5.1	9.5	0.4	1	23	494	516	494	516	0.94
10	10	4.7e-05	0.012	17.8	1.3	1	23	522	545	522	545	0.94

Sequence Information

Coding Sequence: ATGATATGTCGAGTGTGCTTGCTTGATTCTACGGAACAAGTGGAGATTTTTGGAGCTGTAGGTGCTGAACTGGGAATCGCATCAATTATATCCCAACATTTTTGGTTCGAgCCAAAACTAGATGATCCAATCTCAAGTATGATATGTAATACCTGTTGGGGGAAACTTGatagttttcatttattttatactACTGTGGAGGAGGCCCATAGCCAATTGACGGaacgcctttttgttaaggaaGAGCCTGATATAAAAATTGAGGTCAGTGATATACGGCTGGAATGTGCCGTTGTAGATGAAAAAGgacaaatttttaatatctcaGAACCTGATTACTTGAATGATGAGTGGAGTCCGCAGAATTCTCTAGgGTCTGAAAATGCCGAATGCATTCCGGCAGATGAAGAGAGGATGAATGTTGCAGAACCATTGAAAGATGAAAAAACGAAAGAGGTTTACGAATATTCAAATACTGCCGAAGAtgAATCAAAGCCAAGCACATCCACAGAATTGGAAGATCAGCCCAACGATACAGCTGATAAAGATGATGATGAGAAACTGGTCCCAAGTGTGGAGGAGGAATCATCAAAGGTACAGAGTAGACGAAAAACTAGAGAACGGTTACTGCTGAGACGAAAATGTGTTAACCGAAAAGAAAGTGAGAATACCAACAATAGCTCTCTAAAAGACACTTCAAGACAAAGTCCATTAAAGCGAGAAAATAAACGATTAAAAGCCTTTAAAAAATCCAAAGAATGTGACGAAACAATAGCAAAACACATGAAGTTAAAATGTGATATTTGTCGTGAGGAATTTAGTAGATTTGCAGAAGTCACAAAACATTTTCGAACTGTGCATAAACGAATAGGTTATGTGGTTTGCTGCAACAAAAAACTACGCGATAGAGTTGCTCTATTGGGTCATATTAACCGACACCTTAATCCTGATTATTTTAAatgtACAGAATGTAATCAAGTACTTTCCGATAGGGAAAGCCTTGCAACGCATAAGCTACGACATTTATCTGAAGAAGCTAAAATTTATAAATGTGAAAACTGCCCACGAAGATACGCTAGAGCGGTTTTGCTTGATTTGCACAAAGGTATCCATACACCACAAGAAGAGTGGAAGTTTTTCTGCGATGACTGCGGGAAGGCatttCCTACACATATCTTACTCATCCGTCATCGCCGTAATGTGCATGAAAATGCAAATGGAGAAACTTGTCATATCTGTGGAAAGGTTATCAAAGGGAAAGCGAATTTCAAGAAACATCAGCTCGTACATGGGGTTGAGCCAAAAGTACAATGCCAAAAATGTGGTGTATGGCTAAAGCATGCTAATGGCTTAAGGCAACATATGCAACGTCATATTGAAAAGTTAAACACTCATGTTTGTAATATATGCGGTAAAACTGCTCCTTCAAAAAGTGCTTTACGAAATCATGTCCGATATGTCCACGAGCCGGAAAGTTTATTTCAATGCAGTGTTTGCGACAAAGGTTTTTTATGGCCAATAGGTCTTAGGGAACATATGTCAACGCACACAGGTGAAGCATTATATACTTGTCCTTATTGTCCACAAACCTTCAAGAAACGGTCACAAAAGAACGCGCATAGAGAACAAGTACATAGAAAAGAATTGGATGAAATCCGAAGGTGTCGTGGCTTATCAACTTCTGATACAAAATCAATTGAGTCTGAAACAGATTAA
Protein Sequence: MICRVCLLDSTEQVEIFGAVGAELGIASIISQHFWFEPKLDDPISSMICNTCWGKLDSFHLFYTTVEEAHSQLTERLFVKEEPDIKIEVSDIRLECAVVDEKGQIFNISEPDYLNDEWSPQNSLGSENAECIPADEERMNVAEPLKDEKTKEVYEYSNTAEDESKPSTSTELEDQPNDTADKDDDEKLVPSVEEESSKVQSRRKTRERLLLRRKCVNRKESENTNNSSLKDTSRQSPLKRENKRLKAFKKSKECDETIAKHMKLKCDICREEFSRFAEVTKHFRTVHKRIGYVVCCNKKLRDRVALLGHINRHLNPDYFKCTECNQVLSDRESLATHKLRHLSEEAKIYKCENCPRRYARAVLLDLHKGIHTPQEEWKFFCDDCGKAFPTHILLIRHRRNVHENANGETCHICGKVIKGKANFKKHQLVHGVEPKVQCQKCGVWLKHANGLRQHMQRHIEKLNTHVCNICGKTAPSKSALRNHVRYVHEPESLFQCSVCDKGFLWPIGLREHMSTHTGEALYTCPYCPQTFKKRSQKNAHREQVHRKELDEIRRCRGLSTSDTKSIESETD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -