Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979694.1:153738859-153764080[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.5 1.6e+03 1.6 2.1 1 23 169 189 169 189 0.77

2 12 3 7.2e+02 2.7 0.4 2 20 275 293 275 295 0.91

3 12 0.00078 0.19 14.0 0.4 1 23 311 333 311 333 0.97

4 12 4.4e-05 0.011 17.9 1.6 2 23 353 374 352 374 0.97

5 12 2.5 6e+02 3.0 0.5 1 10 403 412 403 417 0.90

6 12 9.5e-07 0.00023 23.1 2.9 1 23 430 452 430 452 0.98

7 12 7.6e-05 0.019 17.1 1.7 1 23 472 494 472 494 0.98

8 12 2.1e-06 0.00051 22.1 5.8 1 23 500 522 500 522 0.99

9 12 0.00029 0.07 15.3 5.8 1 23 528 550 528 550 0.98

10 12 1.8e-05 0.0043 19.1 0.9 1 23 556 578 556 578 0.98

11 12 4.7e-06 0.0011 21.0 0.1 1 23 582 604 582 604 0.98

12 12 0.096 23 7.4 0.2 1 23 613 636 613 636 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.5	1.6e+03	1.6	2.1	1	23	169	189	169	189	0.77
2	12	3	7.2e+02	2.7	0.4	2	20	275	293	275	295	0.91
3	12	0.00078	0.19	14.0	0.4	1	23	311	333	311	333	0.97
4	12	4.4e-05	0.011	17.9	1.6	2	23	353	374	352	374	0.97
5	12	2.5	6e+02	3.0	0.5	1	10	403	412	403	417	0.90
6	12	9.5e-07	0.00023	23.1	2.9	1	23	430	452	430	452	0.98
7	12	7.6e-05	0.019	17.1	1.7	1	23	472	494	472	494	0.98
8	12	2.1e-06	0.00051	22.1	5.8	1	23	500	522	500	522	0.99
9	12	0.00029	0.07	15.3	5.8	1	23	528	550	528	550	0.98
10	12	1.8e-05	0.0043	19.1	0.9	1	23	556	578	556	578	0.98
11	12	4.7e-06	0.0011	21.0	0.1	1	23	582	604	582	604	0.98
12	12	0.096	23	7.4	0.2	1	23	613	636	613	636	0.92

Sequence Information

Coding Sequence: ATGGAAAAACCAATAGACAGCAATCAGGTTTTCACGGATTATATAGCCACGGAAAAGAGATCACTAAGCGATGATATtcgtgaaaaatttaaaaacacaattttagTGGAACTATTAAAAGCAAAAGAAGCGAATCAGTCTGCAACTGTTATCGTAATAGACTCAGAACCGTCACAACCAATGGGAGGTCCTGCTGGTGAAATCCATGACTTGGAAGATGAAATACCTACTAGTAGAATAGTCACTTTAGAAAAAGATGATAATACAAACGATGATTCGTATGCGGAAAGTAATAACTTCATAGAATTTCTAATAGATGAAGACTTATATGATGGAGatattgaatatattgaatataGTGATATGGAAGATCCCAATTCACATACCGATGAAAATAACGGAGAATATCTGATAAAAGAGGAGCCAAAGGATGGACAAGAGGACAGTGTAGAAGAAATACTTCCAGATGTTGAGGTTAAAAAAGAAGATTTAAAAGAAGAACTATATCATTGTAGTTCATGTAACATTAACTTTTCATCCGTTATGGATCATATAAAGACTTTTCACAAAAATCAATCTGTTATAATAGACGGTAGCTTCGAAGAAAATAAAGATAATACAAATGAAGAACAGAACGatgaaataaaaaaggaaaaaaatgaagagGAGTTTTATTCTCTTAATAATTTCACAAATAGCGACGATGTAGAAGAAGAATTTCCTTATATAGATGAAAATTCAAGCACGAGTATAAATAATATGCACAAACAAACAATAAATGAAATCAAAATTGATGCTGAAGTTGAGAAACTAGATGATAACCAGTGCGCTGCATGTCAAATAACATTTGGTTCTCTCGAAGAATTTAGCCAACATACCTGTGAAGGACAACTACATAGTGAAGAAGTAGCAAGGGAGCCGAAACCTCGTTTTGCATGTACATTGTGCTCCAGTGTGTATCAGAATCAGCGTTCTCTAGCGAGTCATATGAGAGTACATAAGAAtccaagaaaagaaaaatatgaaaaaacctTACCCCCAGAAGAAACTAATACCAGATGTGAAATTTGCAATACAACTTTTCCAACAATGAAAAGTTTAaaGCTACATAGGCGAATGCATGGACCTATAAAAACAAAACCATTCGAGGATACGATAGGATATGATCTAAAAGCGATTTCAAAAGATAGAGCTTCTGGTGAGACGTTCTTTTGTGAATTGTGCaataaaagTTATGATGTGATGTTTCAAGACATTCATAAAAAATCACATAAAGCTGGTCAGAAATTTATCTGTCACGGATGTAATAAGAAATTTAGTAACAAAATTAGCTTAACCATGCACATGAAAGTTCATCAAGAATATGGTACATCAAAAAAGCAAGTTAAAGTAAAAGATGGAGTGACATTGCCATATGAATGTGGATTTTGTGGCAAACAGTTTACTAGGCCTCATGAAAAAGTTAAACATGAAAGGATTCATACAGGTGAAAAGCCATTCAAGTGCGAAATATGTGGAAAATGCTTTCGTGTTTCATACTGCTTAACTCTACACTTACGTACACATACTGGAGCTCGACCGTACGTTTGCGCACATTGTAATAAAAGATTTAAGTCTTACTCCGTATATAACCACCACTTAATGACACATTCAGATGAGCGACCGTATAAATGCCCATTCTGTCcgaaaacatttaaaacaagCGTACAattaggtggacataaaaacaGTCATACCAAGCCTTTTAGTTGTCCAGAATGTAATCGACCATTTGCATCATTATATTCGGTTAAAGCTCATATGGAAACACATGTTAAAGGCAGTCGTAATTTGAAACATCGTTGCATTGTTTGTGGTGCTATTTATGCGAGGATATTTGCTCTTCGCGATCATATGAAGGAGCAACATCAATCGGTTTTAAATGAAGAGGGTGAAGTATCTGTAAATGATATAGTAATTGAAAATGAGGATATTATTTCGGCACAATCTATTATGCCTGATAATGAGGAAGAGATTACAGTTGGTGAGATAGAACAATTTCAAACCGAAGAAGTTGTTACTGACTGGCTTAAATAA
Protein Sequence: MEKPIDSNQVFTDYIATEKRSLSDDIREKFKNTILVELLKAKEANQSATVIVIDSEPSQPMGGPAGEIHDLEDEIPTSRIVTLEKDDNTNDDSYAESNNFIEFLIDEDLYDGDIEYIEYSDMEDPNSHTDENNGEYLIKEEPKDGQEDSVEEILPDVEVKKEDLKEELYHCSSCNINFSSVMDHIKTFHKNQSVIIDGSFEENKDNTNEEQNDEIKKEKNEEEFYSLNNFTNSDDVEEEFPYIDENSSTSINNMHKQTINEIKIDAEVEKLDDNQCAACQITFGSLEEFSQHTCEGQLHSEEVAREPKPRFACTLCSSVYQNQRSLASHMRVHKNPRKEKYEKTLPPEETNTRCEICNTTFPTMKSLKLHRRMHGPIKTKPFEDTIGYDLKAISKDRASGETFFCELCNKSYDVMFQDIHKKSHKAGQKFICHGCNKKFSNKISLTMHMKVHQEYGTSKKQVKVKDGVTLPYECGFCGKQFTRPHEKVKHERIHTGEKPFKCEICGKCFRVSYCLTLHLRTHTGARPYVCAHCNKRFKSYSVYNHHLMTHSDERPYKCPFCPKTFKTSVQLGGHKNSHTKPFSCPECNRPFASLYSVKAHMETHVKGSRNLKHRCIVCGAIYARIFALRDHMKEQHQSVLNEEGEVSVNDIVIENEDIISAQSIMPDNEEEITVGEIEQFQTEEVVTDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432485;
90% Identity: iTF_01432485;
80% Identity: -