Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979695.1:163157964-163161838[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.025 6.1 9.2 0.1 3 23 50 71 49 71 0.96

2 14 0.0071 1.7 11.0 1.3 1 23 105 128 105 128 0.96

3 14 0.0091 2.2 10.6 0.9 1 23 135 158 135 158 0.97

4 14 0.00031 0.074 15.3 1.2 1 23 162 184 162 184 0.97

5 14 0.00069 0.17 14.1 0.3 3 23 220 240 219 240 0.97

6 14 4.4 1.1e+03 2.2 0.3 1 23 246 268 246 268 0.79

7 14 0.00036 0.088 15.0 0.1 1 23 341 363 341 363 0.97

8 14 4.9e-05 0.012 17.8 1.4 1 23 427 449 427 449 0.97

9 14 0.00039 0.094 14.9 1.6 1 23 455 477 455 477 0.98

10 14 4e-07 9.8e-05 24.3 0.7 1 23 483 505 483 505 0.99

11 14 6e-07 0.00015 23.8 2.4 1 23 511 533 511 533 0.99

12 14 0.011 2.7 10.3 8.9 1 21 539 559 539 561 0.94

13 14 8.7e-07 0.00021 23.3 3.2 1 23 568 590 568 590 0.99

14 14 9.2e-05 0.022 16.9 4.2 1 23 596 618 596 618 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.025	6.1	9.2	0.1	3	23	50	71	49	71	0.96
2	14	0.0071	1.7	11.0	1.3	1	23	105	128	105	128	0.96
3	14	0.0091	2.2	10.6	0.9	1	23	135	158	135	158	0.97
4	14	0.00031	0.074	15.3	1.2	1	23	162	184	162	184	0.97
5	14	0.00069	0.17	14.1	0.3	3	23	220	240	219	240	0.97
6	14	4.4	1.1e+03	2.2	0.3	1	23	246	268	246	268	0.79
7	14	0.00036	0.088	15.0	0.1	1	23	341	363	341	363	0.97
8	14	4.9e-05	0.012	17.8	1.4	1	23	427	449	427	449	0.97
9	14	0.00039	0.094	14.9	1.6	1	23	455	477	455	477	0.98
10	14	4e-07	9.8e-05	24.3	0.7	1	23	483	505	483	505	0.99
11	14	6e-07	0.00015	23.8	2.4	1	23	511	533	511	533	0.99
12	14	0.011	2.7	10.3	8.9	1	21	539	559	539	561	0.94
13	14	8.7e-07	0.00021	23.3	3.2	1	23	568	590	568	590	0.99
14	14	9.2e-05	0.022	16.9	4.2	1	23	596	618	596	618	0.98

Sequence Information

Coding Sequence: atgtctAGTTACCCAGACAAAGATCCACTTGATTTGGATATTCCGACAACTTCATTAAACGAAATACAATTAAAGAAACCGATCGAGGAAATTGAGCAAAAATGTCCGTCACAAATACAAATTCTCCAGAAAGATAATTCCCAATTTTGTCTGTTATGTACAGAAAATTTTACTTATATTGATAGTTTATTAGATCATATTCAAGTTGTTCATTCGGGTCAACTTGCTGAACAATGCATCTTTTGTCAGACTATGATAAAGCGGGAAGATTACCCAAAGCATATGAACAAGAAACACAGAGGATATCGAATATTTAGGTGTAAATTTTGCAATAATCGATTTGCAAACCGTTCAAGACTAGATGAACACGTTGAAAAAATTCATGAGAGACAAGAAAAGCCATTCAAATGTGAAATTTGCCATGATAGTTTTAAGATAAGTAACGATATACAGGAGCATATGTCGTCAAttcataataaaatatataagtgTCAATATTGTGTTAAATGTTATGGGACATTACGAGAGCTTAATGTACATATTGAAGGTCATATGTTTTCCTCTATTAAAAATCAACCAAAATGCTTTAAAGGGAAAGATAACGATGATTCGCAACTAGAAATTAAGGAGCACTGTGATATAAAACGTGTAAACTTTTGTCTTTTATGTGAGAGGTCCTTTGAATCTTTTGCTGAACTTGAAAAACATATAGACACACATGTGGAAGATAAACCTTTTGAATGTCCATACTGTGCGGATTTGTTTGAGGAGTTAAAAGATTTTAAAGGTCATATATTTCAACACACTACCACCTGTGACATGCAGAGATCCAAGAACGGAGAAGATGTAGATGATCCTTCAAAACAAGTAGAAAAAACATTACATCCGTGTGAAGACAATTTATCTGATAAGGACAATCGTGTGGAATCTACTAGTGATCTAAATATATCACATGATTTCATTAATGAAGTAATGGAAGTAATAAGATCAGATATGGATGAAATTGCACCGGAACATCTTTATGTATGTGGTATTTGCGAGAAAGTATTTAAAAccgaagaaattttaaattcgcaTCTTGCTAAGCATTCAGAGGTTTACTCAAAAGATATAGGCAAATATTGCGGGgaacaattaaattttgaagaACAATTAGATCATTACGAGAAGCATACGGTTGATACTCTGTTTTTATCTCCGAAAAACGAAGCTCCGTTTGTTcataaacaaaatcttaatgaaaatgtaaatataGTGCATAATTTTTCCGATATTGATCATGAATGTACTGTTTGTGatttaacatttaaaacaaatgaTGAATTCCTAGAGCATTATCAAATACACTCCGGAAATGATACATATTCGTGTGATATTTGCAAAAAGACATTTACTAACTTAACGATTTTTAAAGATCATCAACTAATGCATAGCAAAAAGAAAGAATATCAATGTTAtgtttgtggaattttttttaaatttaatggaAATCTCAAGGTTCATATGCGTATCCATACTGGGGAAAAGCcgtataaatgtaaattttgcaATAAGAAATTCGCAAGAATGGCAAATCTTAATGAACATTTACGAACACACACGAAGGTAAGATCGTATCAATGTAAATattgtgagaaaaaatttcatacttCGTCATCCTTTTCTAAACATGAAAAATGTCACTTTAGTAATAAAAGGAAATATAAGTGCACTATTTGTGATAAGAGCTTCTTGCAAAAAGTACATTTAAATAATCACATTCGTACTCATACCAGAGAAAATCCATTTAAATGTCACGTTTGTGGAAAATTTTATAGGCGAAAGGATATTTTGAAGCAGCATCTTAAATtgcatttaaaaagaaatgatTTAAGCGAATATGAAAGTAATTCAGTTGAAAATATAACTGAATTAAATCAAGACAGCGAAATAACTGGGAAACAATAA
Protein Sequence: MSSYPDKDPLDLDIPTTSLNEIQLKKPIEEIEQKCPSQIQILQKDNSQFCLLCTENFTYIDSLLDHIQVVHSGQLAEQCIFCQTMIKREDYPKHMNKKHRGYRIFRCKFCNNRFANRSRLDEHVEKIHERQEKPFKCEICHDSFKISNDIQEHMSSIHNKIYKCQYCVKCYGTLRELNVHIEGHMFSSIKNQPKCFKGKDNDDSQLEIKEHCDIKRVNFCLLCERSFESFAELEKHIDTHVEDKPFECPYCADLFEELKDFKGHIFQHTTTCDMQRSKNGEDVDDPSKQVEKTLHPCEDNLSDKDNRVESTSDLNISHDFINEVMEVIRSDMDEIAPEHLYVCGICEKVFKTEEILNSHLAKHSEVYSKDIGKYCGEQLNFEEQLDHYEKHTVDTLFLSPKNEAPFVHKQNLNENVNIVHNFSDIDHECTVCDLTFKTNDEFLEHYQIHSGNDTYSCDICKKTFTNLTIFKDHQLMHSKKKEYQCYVCGIFFKFNGNLKVHMRIHTGEKPYKCKFCNKKFARMANLNEHLRTHTKVRSYQCKYCEKKFHTSSSFSKHEKCHFSNKRKYKCTICDKSFLQKVHLNNHIRTHTRENPFKCHVCGKFYRRKDILKQHLKLHLKRNDLSEYESNSVENITELNQDSEITGKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432459;
90% Identity: -
80% Identity: -