Tnob047974.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- hang
- Assembly
- GCA_963855945.1
- Location
- OY979697.1:105228518-105236591[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0027 0.65 12.3 0.6 3 23 251 272 250 272 0.96 2 21 0.0025 0.6 12.4 1.9 2 22 339 359 338 359 0.93 3 21 2.3 5.7e+02 3.0 1.1 3 21 369 387 368 388 0.94 4 21 0.014 3.4 10.0 1.3 1 23 428 451 428 451 0.91 5 21 0.0055 1.3 11.3 1.1 2 23 553 575 552 575 0.93 6 21 0.0001 0.025 16.8 1.5 1 23 583 606 583 606 0.96 7 21 0.013 3.1 10.2 1.5 2 23 620 641 619 642 0.93 8 21 1.7 4.2e+02 3.5 3.7 1 23 645 667 645 667 0.98 9 21 0.00066 0.16 14.2 1.0 2 23 740 761 739 761 0.97 10 21 8.1e-05 0.02 17.1 3.7 2 23 805 827 804 828 0.95 11 21 0.00051 0.12 14.5 1.7 2 23 836 858 835 858 0.97 12 21 0.0007 0.17 14.1 0.7 1 23 871 894 871 894 0.96 13 21 0.00048 0.12 14.6 3.3 1 23 914 936 914 936 0.98 14 21 0.0015 0.36 13.1 0.9 1 23 944 967 944 967 0.96 15 21 0.00048 0.12 14.6 0.5 2 23 975 996 974 996 0.96 16 21 5.8e-05 0.014 17.5 0.4 2 23 1044 1065 1043 1065 0.97 17 21 3.2e-05 0.0077 18.4 0.1 1 23 1100 1122 1100 1122 0.98 18 21 0.00081 0.2 13.9 0.7 2 23 1152 1174 1151 1174 0.92 19 21 0.0025 0.62 12.4 1.3 1 23 1191 1213 1191 1213 0.96 20 21 0.036 8.8 8.7 0.2 3 23 1227 1247 1227 1247 0.96 21 21 0.0046 1.1 11.6 1.9 1 23 1390 1412 1390 1412 0.97
Sequence Information
- Coding Sequence
- ATGGATGAGTTAATTGTTCGTGCTAGACAGAATTGCTGTCGCTTGTGCCTAGCGCCGGACAGCGAATGTGTTCCAATTTTTACCAGCTTTGCTGCTGATAAGGAGCCGctttcaacaaaaattcaagcttGTGTCAACATCAAGgttAACCAAGCCGATCGATTATCATCAAGAATATGTCACGCTTGTATAAGTTACTTAAATTCATGGCAGAGTTTCAAGAATCGCTGCATTGCATCCCAGTTAAAACAAAGAAACTGGGTAGAAATGGCTCAAAAAACCGTCAAAAAACAACTAGATAGCATTCGTCTCAATAATGTATCAATGAATAATACAACATCAGCACCAAATGCTAATCAGCAAACTCCTCCTCAAAATCcaatgCCTTTACCACTACAAATTAAGGTAGAGCCCAAAGATGAAGATGATGATGGCCAAGACGAAGGTATGAAAGTTGACATTGATCCAATCGAGTTTTTAGCAAGACGTGATGAGGATGATGAAGAGAATGGTATGCAAGTTGACTCAAAGCCAGTACCTGCAAGACCTGTTCTACCTAGTAGTGAAGGTCCTCAAATATTAACTTCATTAGGTTTAACGCATATAAAAAGTGTAAATCCATTTTCGTTTTTGagcacGGAACTAGATCAAGAAAATGGTCTGCAATCAACCTTAAACGATACTGACAACgcagaaaatatttcagttaatcATCAAACACCAACGAAGACTGCAAATGCTATGCCAGCCTGTCGGGTTTGTAAGCTATCATTTTCGACTAGGGCGAATGCTCGACGTCATGAACGTAATATTCATGGAAAAATTCTAAATAATACAGTCCCTAAGCAAGTAGGAAAACAGGGTGTTAAGTCACAAAAACGGCAACAACTTGCACCAGAAATGTTAGGCATATATGACTATAAAAAACCGGAGAAATATCGTCATTTGTTAACAGAACAAAAACTTGCCTTTATACGTAAAAATGAAGATTTCTTAAAGCAATATCAAAATTTAACTTGTAATTGTTGTCCAAAAAGTTTtccaacatataaaaattttatggcGCATATGCGTAAGAAGTATCAAAATATCGGTaggaatttatgttttaaatgcttaaaacaatttcaaacgAAACCGATGTTTGTTTCACATTTAAAGAAACGTAATTGTATTAAtttgtataaattatatttaagtgATGAAAGCATTCCAAAAACCGAAATGGATAATGTACCAATTGATAAAATGGGTGCTAAAGATTTACTTACAAATAAAGTTTATGAATGTAAAATATGTTCAAAAACATCACGATTAAAAACTGAATTTCGTACACATGTTTATGAAGAACATTCCGAATTTCAAAAGAAGGATGTACCACCAGGATATTGTAGTTTTTGTGGATTAGAAATTGAGGATCCGGTTGAAAGAAAACGCCACTATAATAATATGGAATGTATTGTATCCTTACGGTGTGTTACATGCGAGAGTAAATTTGATACACATCAAAAATTCATTGAACATGTCTATGAGTCTCATTTACCACAACATATAGCAAATAATAATGATGAACCATTCGATTTTGAATCATCACTTTCGAAAGAAGATGAAAGTCCGAAAAATGAAGGTAATATTTACGATCCAAGAATGCCacaaagttgcaaaatttgtggCTTACATTATAATAATTACAATAATGTTCTTCGTCACATGGAAGCAAAACATCCAGATCAATTACCACCTACTTACAAATGTACAAAATGTGATTTAGGCTATCCTCGTTTATCGATGCTTCGCCATCATATGTTAGAAACACATGGCAGCAAATTACCAAAACATAAACGTGATTCAGGTATAACATGcagaatgtgttctgaatcatTTACAGATCGTGAAAAGTGGATAACGCATCAATCTGATCATCATTCTCGATATACATGCTGTCAATGcaattatcaaaataaaaacattgatGATTTTAAGAAACACATTGGAACACACCCGAATTTATCATCGCCCAGCTTGAAAAGAATTGAAAGTTCTGATCAACGTTCAAATACCCCGGATAGATATGATTACGTAATGAGAGATCTTctgttaataaaaaatggtattgaacaaaaagaaaaagaagaagctaTGACAAATGATAATGAAAAATCGGAAATTTCTCAGTCTCCTCCATCCAAGAAAATGAAGTTAGAACCTAATTTAAAGGAGTGTAacatttgtcatatgactttcaGCGGCAATCTTGGCCTGTCGAATCACATGAGAGCACATGCGGCAGTTAATGCTAAAAGAAACAGCTTAGAcgatgcaaaaataattactaCAAGCATAAATGTTAAAAGAGAAGTTAAAcgtaatgttaaaaaagaaaatgatttagATACGAAATTTAGAAGAGTTCGCTGTAGAATATGTCAACGACGTTTCTCTAATAAAAAGAGTTATCGCCGGCATATGCTTATCGATCATCACGTgcgaaatattcaatttattaaatGTACAATTTGTAATTCCGAATTTACACATGAAAAGGGATTGAAATCTCATATGATGAAAGTTCATGGTACAGCAATGACGAATGCAAACTCAGAAATGCAATTTGAATGCAGTGAATGTTCAATAACATTCACCAGTGAACAGCAATTTAACATCCACAAAATGTCGGTGCATTCAAATCAAAAAGAATTTGGATATTCAAATTTAGACAAATCCGAACAAACCCTATGGTTCCAGTGCCGCTATTGTCCACTACATttcaatacaaataaaaaattatcaattcaCATCAACTCACACGAAGAATTTGATTCAAATGATTATTCATGTAAAGATTGCGGAAACGTCTATAGCGGACGAAAGAGCTTATGGGTGCATCGATATAAGAAACATCCATTAATATCGGATCCATCACCGTGTGATATTtgtaaaaagatattttttgataaaaaaatgctaGAATTACATTTACAAAATCATGCTAAATTAAATGAATCACAACATGATGATATTGATGCTGCAGAGCAACATGAAGAATCGCAAAATCAATTTGCCGATGATGAAGATGATGATCATAGTGAGCAGCAATTAAGTAGAGGAAATTCAGTACTGCCGCAAGTTAGTTGTACAGTTTGTAGTGCAAAATTTAGCGATCAAGACCTGTTTACAAAGCATATGCAGATACATGAGAGAGAATTGTATACTGATAATCCGTTAGCTGCAATGTTTGATACTGGCCCGGAGGATCCAAATCAGTTCTTTATGAGTCGAATGGGGGATAATGGAGAGTATCAGTGCGATATATGTCCAAAATCATTTCCAATGCTTACAGCCCTTAAGGTACATAGAAATTGGCATTTTAGGAGTGATAGCAAACAGCTGGTAGCAGACCCTAATTTAGTCTGGCGTGGAAACGTTAAGAAGAGAAAAAACCCAGCATCAGTAAAATGTCAATATTGCAGCTCAACATTTATTAGtgcgaaaaatttaaaacgacaCGTTACAGAACTTCACAAACGTGAAACTGCTGGCGAAACACAGTTAGTTTTTATAGAAAAGCACTTTGAATGTCAGAAATGCAACATGAAATTCCGTACCAATTATGATTGGGTTGAGCATAAAATTAATCATGCAAAAGCAGCTAAGGCTGATGAAACATTTGAATGGGGCTGCGAAATTTGTGGTAAACTTGTCTCACGAAAGGAGCGACTGGTTCAACATTTGACAGCACACTTGAAAGATGATGATCATCGTAATGGTCATTTTGATGGCAATGAAACTGGTTGCGAAAGTAATTCTCAAGATTCTGGTGTATTAAATACTAGTCGTCGATTATCTGAAACCAATAGCGAAAAATCAAATGATAAGAAAGAGGATAGAACAGATCAGGAAATTGTTTATCAAAATGGTAATTGCCATATAAGTGGTGAAGATGGTGTAGAGGTTATACAACAAGaaattgatgatgatgaagaagatGATGACGACGATGATGATCAAAGCCATTCAGATACAGATTCCGAAgataatgatgatgaaaatgaaaatgaaggACATAAATCTGAGAATACATCTGACGAtgatgaagatgatgatgatgatgaagaggcAGAACATTCAGATCAAAGCGCAGAAAGTGAAGAGTCTTTACCTGGATCTTATTCGTGTGATCTATGTCAAGTGTATTTTGAGACGGCGAAACAATTACGGCATCATGTAACAAGCCATTTTATTAGTGGGCCTGGATCAGTTACATTAACTGAATTACcaaaagagaaaattttaaCAGATAGTGATATTACAACGGTTACACCTATTTAA
- Protein Sequence
- MDELIVRARQNCCRLCLAPDSECVPIFTSFAADKEPLSTKIQACVNIKVNQADRLSSRICHACISYLNSWQSFKNRCIASQLKQRNWVEMAQKTVKKQLDSIRLNNVSMNNTTSAPNANQQTPPQNPMPLPLQIKVEPKDEDDDGQDEGMKVDIDPIEFLARRDEDDEENGMQVDSKPVPARPVLPSSEGPQILTSLGLTHIKSVNPFSFLSTELDQENGLQSTLNDTDNAENISVNHQTPTKTANAMPACRVCKLSFSTRANARRHERNIHGKILNNTVPKQVGKQGVKSQKRQQLAPEMLGIYDYKKPEKYRHLLTEQKLAFIRKNEDFLKQYQNLTCNCCPKSFPTYKNFMAHMRKKYQNIGRNLCFKCLKQFQTKPMFVSHLKKRNCINLYKLYLSDESIPKTEMDNVPIDKMGAKDLLTNKVYECKICSKTSRLKTEFRTHVYEEHSEFQKKDVPPGYCSFCGLEIEDPVERKRHYNNMECIVSLRCVTCESKFDTHQKFIEHVYESHLPQHIANNNDEPFDFESSLSKEDESPKNEGNIYDPRMPQSCKICGLHYNNYNNVLRHMEAKHPDQLPPTYKCTKCDLGYPRLSMLRHHMLETHGSKLPKHKRDSGITCRMCSESFTDREKWITHQSDHHSRYTCCQCNYQNKNIDDFKKHIGTHPNLSSPSLKRIESSDQRSNTPDRYDYVMRDLLLIKNGIEQKEKEEAMTNDNEKSEISQSPPSKKMKLEPNLKECNICHMTFSGNLGLSNHMRAHAAVNAKRNSLDDAKIITTSINVKREVKRNVKKENDLDTKFRRVRCRICQRRFSNKKSYRRHMLIDHHVRNIQFIKCTICNSEFTHEKGLKSHMMKVHGTAMTNANSEMQFECSECSITFTSEQQFNIHKMSVHSNQKEFGYSNLDKSEQTLWFQCRYCPLHFNTNKKLSIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLISDPSPCDICKKIFFDKKMLELHLQNHAKLNESQHDDIDAAEQHEESQNQFADDEDDDHSEQQLSRGNSVLPQVSCTVCSAKFSDQDLFTKHMQIHERELYTDNPLAAMFDTGPEDPNQFFMSRMGDNGEYQCDICPKSFPMLTALKVHRNWHFRSDSKQLVADPNLVWRGNVKKRKNPASVKCQYCSSTFISAKNLKRHVTELHKRETAGETQLVFIEKHFECQKCNMKFRTNYDWVEHKINHAKAAKADETFEWGCEICGKLVSRKERLVQHLTAHLKDDDHRNGHFDGNETGCESNSQDSGVLNTSRRLSETNSEKSNDKKEDRTDQEIVYQNGNCHISGEDGVEVIQQEIDDDEEDDDDDDDQSHSDTDSEDNDDENENEGHKSENTSDDDEDDDDDEEAEHSDQSAESEESLPGSYSCDLCQVYFETAKQLRHHVTSHFISGPGSVTLTELPKEKILTDSDITTVTPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01432446;
- 90% Identity
- iTF_01432446;
- 80% Identity
- -