Basic Information

Insect: Thereva nobilitata
Gene Symbol: su(Hw)
Assembly: GCA_963855945.1
Location: OY979695.1:52000236-52006390[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.034 8.2 8.8 2.0 1 20 74 93 74 95 0.57

2 13 9.9e-06 0.0024 19.9 1.0 2 23 146 168 145 168 0.95

3 13 0.12 29 7.1 0.3 1 23 174 196 174 196 0.98

4 13 1.4e-05 0.0033 19.5 5.8 1 21 202 222 202 223 0.95

5 13 1.9e-06 0.00047 22.2 0.3 2 23 236 257 235 257 0.96

6 13 1.6e-06 0.0004 22.4 0.4 1 23 266 288 266 288 0.99

7 13 7.9e-06 0.0019 20.2 0.3 1 23 294 316 294 316 0.98

8 13 5.7e-06 0.0014 20.7 0.3 1 23 322 344 322 344 0.99

9 13 7.2e-06 0.0018 20.4 3.1 1 23 350 372 350 372 0.96

10 13 0.009 2.2 10.6 2.6 1 23 379 402 379 402 0.98

11 13 6.3e-06 0.0015 20.6 0.4 1 23 407 430 407 430 0.97

12 13 0.52 1.3e+02 5.1 0.3 1 23 438 460 438 460 0.91

13 13 4.1e-05 0.01 18.0 1.9 2 23 467 489 466 489 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.034	8.2	8.8	2.0	1	20	74	93	74	95	0.57
2	13	9.9e-06	0.0024	19.9	1.0	2	23	146	168	145	168	0.95
3	13	0.12	29	7.1	0.3	1	23	174	196	174	196	0.98
4	13	1.4e-05	0.0033	19.5	5.8	1	21	202	222	202	223	0.95
5	13	1.9e-06	0.00047	22.2	0.3	2	23	236	257	235	257	0.96
6	13	1.6e-06	0.0004	22.4	0.4	1	23	266	288	266	288	0.99
7	13	7.9e-06	0.0019	20.2	0.3	1	23	294	316	294	316	0.98
8	13	5.7e-06	0.0014	20.7	0.3	1	23	322	344	322	344	0.99
9	13	7.2e-06	0.0018	20.4	3.1	1	23	350	372	350	372	0.96
10	13	0.009	2.2	10.6	2.6	1	23	379	402	379	402	0.98
11	13	6.3e-06	0.0015	20.6	0.4	1	23	407	430	407	430	0.97
12	13	0.52	1.3e+02	5.1	0.3	1	23	438	460	438	460	0.91
13	13	4.1e-05	0.01	18.0	1.9	2	23	467	489	466	489	0.95

Sequence Information

Coding Sequence: ATGGCAGAACCAACCATTCTAAACATAAAATTCAATCCAGATAatgatgaaattgaaataatcGAAGGAGATAGAAATGAAGGTGATAGCTCAGATCAATACTTTATAGAAAAGGTAGAAAACAAAGATTCGTTAATCGATTATATCGTTGTTACAACGGAAGAACCGGAACAACCTGAAAATAAGGCAGGTGAAGAATCCGTTGAAGAAATCGTGGAGCATGTTTGTGGCAAGTGTTTTTCAACGTATAGTAACTTTAGCCGTCTTCAAaggcatttaaaattttgtcgttcacaaacgaaaaaaattacccCAACGCCCGAAACAACAGAAATAAATTTCAGCAAAATAGGGAAAGAAGCAGAGAAAATGgaaagcaaaaatatttgtttttgctGTGGAGAAAATTATGAAACATGCCATTCTGGCCCAATTCGATGCTATGAATGTCCCAAATCATTTAAATCAAGCAAAAGTTTTGAGCGACACTTGCAGCTTATCCATGCAGGACATGAGCAATTTCCATGTCTAGTTTGCAATGCTAGATGCccaacaaaagaaattttagaTATTCACATAAAAACGCATAGTCGTGGAAAGCCGTTCGTTTGTAAAAAATGTGGTAAAGAATTTACAAGAAAATATCATCTTTACCGTCATCATAAGTATTCAACTTGTGACACTTCACAGCCGAAACCTGAATTATCATGTAATGCTTGTGGCAAAGTATTTGTTCGCCTTGATAATTTAAGAAGTCATTTACGACAACATTTAGGAAAAGGCAAGAATAGAGATTATAAATGTCCGTATTGTGAAAAAACTTTTTACGGAACAGCTACTTTaaaTATTCATATACGAGTGCATACAGGTGAACGGCCATTTATATGCGATATCTGTAAAAGGGGATTTCCTTCGAATCCAGCATTAAGAAAACATCGCCGATCACATACTGGTGAAAAACCTTATAGCTGCTCACAGTGCCCTAAAGCTTTTGCAGCTAAGGAAGTTCTTAACCGTCATATGAAAACCCACACAGGAGAAAAGCCACATAGTTGTACCTTATGTAAAAAGAGTTTTATACAAGCTACTCAGTTAAAGAAACATATGATTCAACATAATAAGGCTAAGGATAGTTATCAATGCATGCATTGCACATCTGAATTTACTTCGCTGAACAGACTTACAAAACACGAAATGACTGCTCACGGTGGTGATGATTACAAATGCACAGAATGCCCTCTAAGTTTTACTACAATTGGCGGATTGAATCGGCACATATCAAGGAAACATAAAAAGGAAGAAGTTACTGATTTTCTATGCGAAATATGCGATAAAATAATAGTAGGAAAAGACAGCTACAAATTTCACTTACTACGCCATAATGACGATGAGCAACAAAAATGTCGAATTTGTGAGAAGACATTCGAAAGGAAAACTTTACTAATGAATCACCTGAGAGACAAGCATAGACCAGCAAGTGATTACTTGGTTGAGAATGATAGCAAAGTTGAAagaatatttgaaataattgttCAGGATGATGAGGAAATGGAAGAGGAAGAATCGATTAATGATACTGATAAAATCGAAGAATATATTCTCCTAGATGATCaaacagaattaaaattaatacaagACGCATTCAAAATAGAATATGAACCCGATGAGGTGAAACCAAGTGTACAGGAAGAAGTGAAAACAGAAGTGGAACCGGAAGATTCGGAATCAGCTATGGATGATATTGAGagcaaaataaagaaattgttaGTTTTACTAGTGGAGGGTAGTATACTTACCAAATTTGGCTGGCCATCGGCAAATATTGAAAGTGTATTGgagaaaattatcaaaaattgtgGGCATACACCTAAAAAATTTGAACCAAATATTGATTACTGTACAAAAATGAGAGAATATGTTAAGTTACTTTTTACAGTCGTAATTGACAATGATTCAATCAAAGAACTTCTTAATAATCATTCAATAGATGAGGTTATACATCAAGTATTAAAAATGGCTAAAATTGATTAA
Protein Sequence: MAEPTILNIKFNPDNDEIEIIEGDRNEGDSSDQYFIEKVENKDSLIDYIVVTTEEPEQPENKAGEESVEEIVEHVCGKCFSTYSNFSRLQRHLKFCRSQTKKITPTPETTEINFSKIGKEAEKMESKNICFCCGENYETCHSGPIRCYECPKSFKSSKSFERHLQLIHAGHEQFPCLVCNARCPTKEILDIHIKTHSRGKPFVCKKCGKEFTRKYHLYRHHKYSTCDTSQPKPELSCNACGKVFVRLDNLRSHLRQHLGKGKNRDYKCPYCEKTFYGTATLNIHIRVHTGERPFICDICKRGFPSNPALRKHRRSHTGEKPYSCSQCPKAFAAKEVLNRHMKTHTGEKPHSCTLCKKSFIQATQLKKHMIQHNKAKDSYQCMHCTSEFTSLNRLTKHEMTAHGGDDYKCTECPLSFTTIGGLNRHISRKHKKEEVTDFLCEICDKIIVGKDSYKFHLLRHNDDEQQKCRICEKTFERKTLLMNHLRDKHRPASDYLVENDSKVERIFEIIVQDDEEMEEEESINDTDKIEEYILLDDQTELKLIQDAFKIEYEPDEVKPSVQEEVKTEVEPEDSESAMDDIESKIKKLLVLLVEGSILTKFGWPSANIESVLEKIIKNCGHTPKKFEPNIDYCTKMREYVKLLFTVVIDNDSIKELLNNHSIDEVIHQVLKMAKID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432450;
90% Identity: iTF_01432450;
80% Identity: -