Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979694.1:232513317-232519402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.8e-06 0.00043 22.3 5.9 1 23 343 365 343 365 0.97

2 14 4.2e-05 0.01 18.0 1.2 2 23 370 391 369 391 0.98

3 14 1.4e-06 0.00034 22.6 2.8 2 23 399 420 398 420 0.97

4 14 0.00042 0.1 14.8 4.6 1 23 426 449 426 449 0.95

5 14 3.9e-05 0.0095 18.1 2.9 1 23 454 476 454 476 0.97

6 14 0.04 9.6 8.6 0.3 1 23 482 505 482 505 0.96

7 14 0.0004 0.098 14.9 0.3 2 23 515 537 515 537 0.96

8 14 1e-06 0.00025 23.0 1.9 2 23 543 564 543 564 0.98

9 14 0.099 24 7.4 1.4 2 14 571 583 570 591 0.82

10 14 1.8e-06 0.00045 22.2 1.7 2 23 597 618 596 618 0.97

11 14 0.00018 0.043 16.0 2.5 1 21 624 644 624 645 0.96

12 14 3.3e-06 0.00079 21.5 0.2 2 23 657 678 657 678 0.97

13 14 1.7e-06 0.00041 22.3 4.3 2 23 684 705 684 705 0.98

14 14 0.12 28 7.1 1.2 2 14 712 724 711 728 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.8e-06	0.00043	22.3	5.9	1	23	343	365	343	365	0.97
2	14	4.2e-05	0.01	18.0	1.2	2	23	370	391	369	391	0.98
3	14	1.4e-06	0.00034	22.6	2.8	2	23	399	420	398	420	0.97
4	14	0.00042	0.1	14.8	4.6	1	23	426	449	426	449	0.95
5	14	3.9e-05	0.0095	18.1	2.9	1	23	454	476	454	476	0.97
6	14	0.04	9.6	8.6	0.3	1	23	482	505	482	505	0.96
7	14	0.0004	0.098	14.9	0.3	2	23	515	537	515	537	0.96
8	14	1e-06	0.00025	23.0	1.9	2	23	543	564	543	564	0.98
9	14	0.099	24	7.4	1.4	2	14	571	583	570	591	0.82
10	14	1.8e-06	0.00045	22.2	1.7	2	23	597	618	596	618	0.97
11	14	0.00018	0.043	16.0	2.5	1	21	624	644	624	645	0.96
12	14	3.3e-06	0.00079	21.5	0.2	2	23	657	678	657	678	0.97
13	14	1.7e-06	0.00041	22.3	4.3	2	23	684	705	684	705	0.98
14	14	0.12	28	7.1	1.2	2	14	712	724	711	728	0.85

Sequence Information

Coding Sequence: ATGGATACTCTATGCCGAGTTTGCATTGAAAAGGTGGCAAAACGCACCTCGTTGAGCTCTAAAATCGAAGACTCCTCAAACCTGTCGTTCTTTGATTTCTTAAATAAGTGCACAATTCTGAATGCACGTGAAGGTGATAGTCTGCCGCAAAGCCTTTGCTCCGTCTGTGATAACGCTATGAGAATGTTTTATTCATTCACGAAACAGGCTGAAAAGTCTGATCTAATTTTGAGGGAAGCCTTGAAAAAGTTAGTTGCAGAGGCAAGATACAATGGTCACAAAGAAGACTCATTTCATTATCAGCCAACAAAAAACTCAACTAGATCATCAGTTTATATTCTGGATTTTGTGAAGGAAGAATCACGCGTTTCCGACAGTACATCAATTGTTGCTGTAAAACAAGTTGGAATTAATGAAAGTGAACATTTTGAATCTAGTCTTAATCATCCGGAAGAGAGTAACGAGGAACCTGACGACATTTTATCATGTATAGGTCGTCTTCTAGAGAGCATTGATGAAGCAGAGCTTACTGATTCTGAGGATGACATACCCACAAGTGCATTGAAAAGGAAATTGGCTAAACGTGAGGATGAAGCTGATTCTCAAAGAAATTCTTGCGAggaaataacaacaaaacacgAGACGATTGGGGAAGAGTTTGAAGATTTTAACCAGGACGACTCATTTCATTGTCAGCCAAGTAAAAACTCAACTGGATCATTATCTTTTATTCTGAAGGAAGAGCCACGCGTATCCGAAAGGACATCAATTGTTTATGTGAAAGATGCTGTGAttaatgaaagtgaaaatttgaaGTCTAATCTAGATAATCCCAagGGGAGCGTCGAGGAACTTGATGATGTTTTATCATGCATAAGTCGTCCAGCGAGCATTGACACAGAGCATGCTGATTCTGAGGATGACTTACCAATGAGTTTATTAAAAAAGAGATTGGCTAAAAATGGGGATGAAGCGGACTCTCAAAGAAATTGTCGCGAGGAAATAACAAGCAAAGAAACGACTTGGCATAGATGCAAGCTATGCGGTAAAAAATttcgtagaaaaaaaaacctcaatAACCATCTGCAAAATCACAAGGGGATACAAAAATGCGATAAGTGCGGCAAGgaatttgaaaacatctataggCTACGCCAGCACTTGAACACGCACGCTGATCTGTTAAAGCATATAAAATGCGAGCAATGCGGCAAGGAATTTAAGCACAGGGAAAGTCTAAGTAGGCACATGAAATTGCATAATAATCCAAAACCGTTTATGTGTGAAATCTGTGGCAGGTTGTTTTCTAGAAAAGATTGTTACACTAGTCATATGGAGCTATGTCACAAGGCGATTAAACATGAATGCGATAAATGTGGCAAGGAACTTAAGAACAGGAAGACTCTAAATAGCCACATGAAATTGCATAATAATCCTGAAGCGTTTATGTGTGAAAGCTGTGGCAAGTGGCTTTTTAGTAAAGAGAGTTACGCTAGGCATATGGACACAGTTCACCCAGAGCAAtccgaaaaatcgaaaaatgaatgCGGAATATGCGGTAACAATTTTAGTACAAAAAATTACCTCGATATTCATATGGAAAAACAACACAAGGGGATTACACGAAAATGCGATAAATGCGGCAAGGAATTTACCAACAAGCTTAGTCTAAATAGGCACATGAAATGGCATAATAATCCAGAAGCGTGTAAGTGTGAAATCTGTGGCAAGTCGCTTTCTAGTAAAAGAAGTGCTCATATGGAAAAACAACACAAGGGGATTAAACAAAAATGCGATAAATGCGGCAAGGAATTTACGAACAACTTTAGTTTAAGTAATCACATGAAATGGCATAATAATATAGAAGCGTTTAAGTGTGAAATCTGTGGCAAGTCGCTTTGTAATAAAGAGAGTTACACTATGCATATGCACCTATGTAACCCACAGCAATTGGACAAAACGAAAAATTATTGCGGAATATGCGGCAAAAGTCTTAGTACAAAATATTACCTCAATGCTCATATGGAAAGCCACCAGGGGATTATACGAAAATGCGATAAATGCGGCAAGGAATTTAAGCACAGGGAAAGTCTAAGGAAGCACATGAAATGGCATAATAATCCAGAAGCGTGTAAGTGTGAAATCTGTGGCAAGTCGCTTTCTAGTAAAAGAAGGTATACCATTACAATATTCTTTGTATAA
Protein Sequence: MDTLCRVCIEKVAKRTSLSSKIEDSSNLSFFDFLNKCTILNAREGDSLPQSLCSVCDNAMRMFYSFTKQAEKSDLILREALKKLVAEARYNGHKEDSFHYQPTKNSTRSSVYILDFVKEESRVSDSTSIVAVKQVGINESEHFESSLNHPEESNEEPDDILSCIGRLLESIDEAELTDSEDDIPTSALKRKLAKREDEADSQRNSCEEITTKHETIGEEFEDFNQDDSFHCQPSKNSTGSLSFILKEEPRVSERTSIVYVKDAVINESENLKSNLDNPKGSVEELDDVLSCISRPASIDTEHADSEDDLPMSLLKKRLAKNGDEADSQRNCREEITSKETTWHRCKLCGKKFRRKKNLNNHLQNHKGIQKCDKCGKEFENIYRLRQHLNTHADLLKHIKCEQCGKEFKHRESLSRHMKLHNNPKPFMCEICGRLFSRKDCYTSHMELCHKAIKHECDKCGKELKNRKTLNSHMKLHNNPEAFMCESCGKWLFSKESYARHMDTVHPEQSEKSKNECGICGNNFSTKNYLDIHMEKQHKGITRKCDKCGKEFTNKLSLNRHMKWHNNPEACKCEICGKSLSSKRSAHMEKQHKGIKQKCDKCGKEFTNNFSLSNHMKWHNNIEAFKCEICGKSLCNKESYTMHMHLCNPQQLDKTKNYCGICGKSLSTKYYLNAHMESHQGIIRKCDKCGKEFKHRESLRKHMKWHNNPEACKCEICGKSLSSKRRYTITIFFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -