Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979695.1:174201180-174205682[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00049 0.12 14.6 0.3 3 23 232 253 230 253 0.93

2 14 0.00018 0.044 16.0 2.5 1 23 259 281 259 281 0.98

3 14 0.0002 0.048 15.9 1.1 1 23 287 310 287 310 0.95

4 14 0.023 5.6 9.4 1.2 1 23 315 337 315 337 0.98

5 14 0.00035 0.084 15.1 10.1 1 23 343 365 343 365 0.99

6 14 1.5e-05 0.0036 19.4 2.7 1 23 371 393 371 393 0.96

7 14 1.4e-06 0.00033 22.6 0.2 1 23 399 421 399 421 0.98

8 14 1.7e-08 4e-06 28.7 0.7 1 23 427 449 427 449 0.99

9 14 0.00033 0.08 15.2 3.1 1 23 455 478 455 478 0.95

10 14 4.4e-06 0.0011 21.0 0.9 1 23 510 532 510 532 0.97

11 14 3e-05 0.0072 18.4 1.4 1 23 538 561 538 561 0.94

12 14 6.2e-06 0.0015 20.6 1.0 1 23 567 589 567 589 0.98

13 14 7.5e-05 0.018 17.2 3.8 1 23 595 617 595 617 0.98

14 14 0.00062 0.15 14.3 0.5 1 23 623 645 623 645 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00049	0.12	14.6	0.3	3	23	232	253	230	253	0.93
2	14	0.00018	0.044	16.0	2.5	1	23	259	281	259	281	0.98
3	14	0.0002	0.048	15.9	1.1	1	23	287	310	287	310	0.95
4	14	0.023	5.6	9.4	1.2	1	23	315	337	315	337	0.98
5	14	0.00035	0.084	15.1	10.1	1	23	343	365	343	365	0.99
6	14	1.5e-05	0.0036	19.4	2.7	1	23	371	393	371	393	0.96
7	14	1.4e-06	0.00033	22.6	0.2	1	23	399	421	399	421	0.98
8	14	1.7e-08	4e-06	28.7	0.7	1	23	427	449	427	449	0.99
9	14	0.00033	0.08	15.2	3.1	1	23	455	478	455	478	0.95
10	14	4.4e-06	0.0011	21.0	0.9	1	23	510	532	510	532	0.97
11	14	3e-05	0.0072	18.4	1.4	1	23	538	561	538	561	0.94
12	14	6.2e-06	0.0015	20.6	1.0	1	23	567	589	567	589	0.98
13	14	7.5e-05	0.018	17.2	3.8	1	23	595	617	595	617	0.98
14	14	0.00062	0.15	14.3	0.5	1	23	623	645	623	645	0.98

Sequence Information

Coding Sequence: atgtgtACAGCAGAAAGCGAGCCAGAAAGAATCTTCAGCTTAGAACTAACATGCAGGACATGTTCTAATTGGGTCAATCCGCAAATGTTAATTCCTGTATTTGAGGCTGATGTAACATGCAATGTTGCTCCTATacaaataattgaagaattgcaatttattaatttaaagATTTATCCTGATGATGGTTTACCACAGCAAATTTGCAGCGAATGCTTGAGTCGTCTCTCTATGATAAGTTCATTTCGGAAGCAATGTGAAAATACTCAGTCGATATTAGAGGCATACTTTCGCAAATCAACAGCAGAAGCTGAAGCTGAACTTATCGATTCTGGATATGAACACATTGAGGTGATACACATTGGAACTGTATTTCCAGAAAAGgaagaaattgaaaattttaaagtagATCCTCCCGAACTTGTAAAGGAATCAAGAAACGAAGAGCTGAAATGtcgaaaaaaacaaataattgaagattttctttattctgaaaatcaagaagacATTCTCGCAGAAGGTATTTCGACTGATAATGATGGATATGTAGACGTTGAAACAATAAAGATGGAATCAGAACAAGTATATTCTGAACAAGAGGAATCTCAAGATCAGTATTTACAATGCGATAAATATAACGAAGATATTTCAAATGAATCTCAAAATTGTGTAGCTccagagaaaaaaataatttgccaAACTTgtaatgaaaaatttacaagcatTGCAGATTTACGAAAACACAGAATGGAACTGCACCCCAAAAAACGTCCTTATATGTGTCCAATTTGTCATAGAACCTTCCAAAGCGTTTCAAACCGAAATACTCACTTACAGTCTCACAAtgaaattaattcttttaaatGTGAAATCTGCAATCAAGGATTTAAAAGTAAGGTATATGTAAATAAGCATAAAAAAGCTGTTCACAATACAGGAGAATACGAATGTCCTGCTTGTGGTCaaagatttcaaaatattgctaagTATCATTATCATGTTAAGTCGCATAGTCcaaataagaaatataaatgtaaattttgcgATAAGTCATTTATGCAGCATCATCACTTATCAAACCACGAACGAACACATACCGGTCACAGGCCTTATCTTTGTAATATTTGtggaaaagACTTTAAGCAGGAATGCAACTTTAAATTGCATCTTAGAATACACAGCGGAGTAAGACCATATGTTTGTAGCATATGTGGTAAAGATTTCGCTCAACGAGGATCATTTGCTATGCATATGCGCCTACATACCGGTGTAAGACCATATCAGTGTGAAGTTTGTggtaaaaatttcatacaaaaatcaaCACTAACTGTTCATTTACGGACACATACCGGAGAAAAGCCCTACAAATGTGATCAATGTGATCGAGCCTTTGTTCAAACTCATCAATTGAAATATCACAAGTATTCAGCTCACAACGGACCACctgttaacaaaaaattagaTGACTTAATTGAAGTTGATAAAAAGTCGAGCCAAAAAAACTCCCCAGAAGTATCAAATCCACCTTTTAATTGCCCGCTATGTTCGAAAAGTTTTAAATTACCTTCCTCGTTAACAACACATGTAAAGAGCCATACAGAAGAACGGAAACACGTCTGTACCCAATGTGGTAACTCTTTCAAGAGGGCAGAACATTTACGAATTCATGTTAATGGTGTTCACCTTAAGCAAAAACCCTACGCCTGTGATTACTGCAGCAAAACATTTTCCCAATCTGGAGATAGGAATATACATATGAAAAGTCATACTCaagaaaaaccataTACTTGTCGACATTGTAAAAAAGGCTTTAAGCTTCAAAAATCTCTTAGAGCTCACGAAAGAATTCATACGGGTGAAAAACCTTTTACATGTGAAATATGTCGAAAGGATTTTATGACTTACAATGCCTTAGCAATTCACACCATGAAGCATACTGCAATAGAAAATAATGAgctaaaagaaaaaactttagaAGAggttaaaaatgtattaatttcGAAAATGGACAATTTACCGCAATCTACAGTAATTTCTGAAGAGAACATAAATTCTATTCCGCCAGAAAATATTTCCGTAATTGAGGAGATACAAATTAAAGACAATTCTTTAGAAGCAGAAGAGCCTAATGATGACGTGCCAGCGAGAAGGCATCAAACAGCTATTATTATCCCTGCTGCATCAGCGAGTTTTGTACAgattaattag
Protein Sequence: MCTAESEPERIFSLELTCRTCSNWVNPQMLIPVFEADVTCNVAPIQIIEELQFINLKIYPDDGLPQQICSECLSRLSMISSFRKQCENTQSILEAYFRKSTAEAEAELIDSGYEHIEVIHIGTVFPEKEEIENFKVDPPELVKESRNEELKCRKKQIIEDFLYSENQEDILAEGISTDNDGYVDVETIKMESEQVYSEQEESQDQYLQCDKYNEDISNESQNCVAPEKKIICQTCNEKFTSIADLRKHRMELHPKKRPYMCPICHRTFQSVSNRNTHLQSHNEINSFKCEICNQGFKSKVYVNKHKKAVHNTGEYECPACGQRFQNIAKYHYHVKSHSPNKKYKCKFCDKSFMQHHHLSNHERTHTGHRPYLCNICGKDFKQECNFKLHLRIHSGVRPYVCSICGKDFAQRGSFAMHMRLHTGVRPYQCEVCGKNFIQKSTLTVHLRTHTGEKPYKCDQCDRAFVQTHQLKYHKYSAHNGPPVNKKLDDLIEVDKKSSQKNSPEVSNPPFNCPLCSKSFKLPSSLTTHVKSHTEERKHVCTQCGNSFKRAEHLRIHVNGVHLKQKPYACDYCSKTFSQSGDRNIHMKSHTQEKPYTCRHCKKGFKLQKSLRAHERIHTGEKPFTCEICRKDFMTYNALAIHTMKHTAIENNELKEKTLEEVKNVLISKMDNLPQSTVISEENINSIPPENISVIEEIQIKDNSLEAEEPNDDVPARRHQTAIIIPAASASFVQIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432433;
90% Identity: iTF_01432433;
80% Identity: -