Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979697.1:32179332-32183460[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.6e-07 0.00021 23.3 0.8 1 23 193 215 193 215 0.98

2 11 7.6e-07 0.00019 23.4 3.1 1 23 221 243 221 243 0.97

3 11 0.00031 0.075 15.2 1.3 3 23 257 277 256 277 0.98

4 11 1.1e-05 0.0026 19.8 0.4 2 23 284 305 283 305 0.97

5 11 1.8e-07 4.3e-05 25.4 1.0 1 23 311 333 311 333 0.98

6 11 2.3e-06 0.00055 22.0 0.0 1 23 339 361 339 361 0.98

7 11 1.3e-05 0.0032 19.6 1.5 1 23 367 389 367 389 0.96

8 11 1.1e-05 0.0028 19.7 0.5 1 23 395 417 395 417 0.99

9 11 3.2e-06 0.00078 21.5 3.1 1 23 423 445 423 445 0.98

10 11 3.4e-05 0.0083 18.2 0.4 1 23 451 473 451 473 0.98

11 11 4.3e-05 0.01 17.9 1.2 1 23 479 501 479 501 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.6e-07	0.00021	23.3	0.8	1	23	193	215	193	215	0.98
2	11	7.6e-07	0.00019	23.4	3.1	1	23	221	243	221	243	0.97
3	11	0.00031	0.075	15.2	1.3	3	23	257	277	256	277	0.98
4	11	1.1e-05	0.0026	19.8	0.4	2	23	284	305	283	305	0.97
5	11	1.8e-07	4.3e-05	25.4	1.0	1	23	311	333	311	333	0.98
6	11	2.3e-06	0.00055	22.0	0.0	1	23	339	361	339	361	0.98
7	11	1.3e-05	0.0032	19.6	1.5	1	23	367	389	367	389	0.96
8	11	1.1e-05	0.0028	19.7	0.5	1	23	395	417	395	417	0.99
9	11	3.2e-06	0.00078	21.5	3.1	1	23	423	445	423	445	0.98
10	11	3.4e-05	0.0083	18.2	0.4	1	23	451	473	451	473	0.98
11	11	4.3e-05	0.01	17.9	1.2	1	23	479	501	479	501	0.96

Sequence Information

Coding Sequence: ATGACAACTATTATTCCAAAATTCTTAGATATCGATAAAATATGTCGCGCCTGTTTAACAGAGAAAGGGGAAATGCAAGCACTGTACGGGGCATCCCTTGACAACATGCTGTGTTCTATCGCTGAAGTACAAGTCAAATTTGGAGATGGATTGCCAGAGCAGCTGTGCTTGCAATGCATCCTGCAAGTCAGCAGGGCTTTCCGTTTTAAGCAACAGTGTGAACGGGCAGACTTGACGTTGAGAAAGTATCTAGCGGATAAATCAAAAGAAGCCGAGTCTCAATTTGCCGATGAGATTATTGAAGCAGTTGCTGTAGGTCAGGAATAtctaataacaaataataatcGTAATGCTTTAGTTACTGGCAACGTTTGCGTGGAACAACTAGATAAGTTTGAATTTACTTTAAGTGGCGATCCAATTAGAATACAAATATCTCAGGATAATGAATCAGATCCCCAAGATAAATTACAAGaagAAATTGTCaccaaagaaacaaatattGCCAAATCACCAGATCCAGGTGAAACTGAGGAAGAAAAGAAAagaAAATTCCTCTCCCCAGAGCCAGCAAGTTATGAATGCAATATATGTGGTAAAACGTTTCCAAAGCGGAAAATGTGGAAGAGGCATGTTAAAATCCATGATCCTATAAAACCTCACGTATGTTCAGATTGTGGAATGTCCTTTACCGAAAGCTCAAATCTAACCAAGCACAAGAAGAAACATACCGGTGAACTGCGGAATGTTGTTGGAAAGCCGAACTTGTGTTCAGTTTGTGGAAAGGGCTTTAAGTGGGCGAGTTCCCTTTATAAGCATATGAATCatcatacaaagaaaaaaattttaacttgtCCTTACTGCCCGAAATATTATGTAGAAAGCAGATCACTTAAGATTCACCTACGGACGCATACCGGAGAAAAGCCATTTATGTGTGAATTTTGCAACAAAGGATTCACCCAAATGAGTAATCTAGAAAAGCATATAAGAGTCCATACGGGTGAAAAGCCATTTATATGCCCAGTTTGCGGGAAAGGATTCTCACAAAGTGGTTATGTTGCTGTGCATCTTCGTTCACATACAGGTGAAAAGCCATACTTATGCACTGATTGCGGGAAATGTTTTGCAGGTTCAAATGGTTTAACAATCCATAAGAAAACACATACTGGCGAAAGGCCCTATTCGTGTAACATATGCAAAAAGGCTTTTGCAAGACAAGAGACGGCAATAATTCACAAAAGAACGCACACTGGCGAGAGGCCGCACGTTTGTAACATTTGTAATCGAGGATTTACAAGTTCAGGGCATTTATCTAGTCATTTAAGATCGCACACGGGCGTCAAACCATATAGCTGTGATGTTTGTGAAAAGAAGTTCGCTAGTGGTAACAGTCTAAAGgttcatctaaaatcgcatgaAAAGGATAGGTTCCATGACTGTCATCTATGCGATCAGAAATTTCCTCGGCCTGCACTTTTAGAAGAACACCAACTTTCTCACAATCCAATAATAATGTTCGAGGCAAAGTTAGAGCCAAATGAGAACGAATACGACGTAGAGATTTTAAGCTAA
Protein Sequence: MTTIIPKFLDIDKICRACLTEKGEMQALYGASLDNMLCSIAEVQVKFGDGLPEQLCLQCILQVSRAFRFKQQCERADLTLRKYLADKSKEAESQFADEIIEAVAVGQEYLITNNNRNALVTGNVCVEQLDKFEFTLSGDPIRIQISQDNESDPQDKLQEEIVTKETNIAKSPDPGETEEEKKRKFLSPEPASYECNICGKTFPKRKMWKRHVKIHDPIKPHVCSDCGMSFTESSNLTKHKKKHTGELRNVVGKPNLCSVCGKGFKWASSLYKHMNHHTKKKILTCPYCPKYYVESRSLKIHLRTHTGEKPFMCEFCNKGFTQMSNLEKHIRVHTGEKPFICPVCGKGFSQSGYVAVHLRSHTGEKPYLCTDCGKCFAGSNGLTIHKKTHTGERPYSCNICKKAFARQETAIIHKRTHTGERPHVCNICNRGFTSSGHLSSHLRSHTGVKPYSCDVCEKKFASGNSLKVHLKSHEKDRFHDCHLCDQKFPRPALLEEHQLSHNPIIMFEAKLEPNENEYDVEILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432436;
90% Identity: iTF_01432436;
80% Identity: -