Basic Information

Gene Symbol
zfy1
Assembly
GCA_963855945.1
Location
OY979695.1:125676571-125678625[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.074 18 7.8 0.3 1 13 194 206 194 212 0.91
2 12 0.00019 0.045 15.9 3.5 2 23 238 260 237 260 0.96
3 12 0.00013 0.032 16.4 0.1 1 21 319 339 319 340 0.96
4 12 1.5e-06 0.00036 22.5 2.3 1 23 348 370 348 370 0.98
5 12 3.4e-06 0.00084 21.4 2.6 1 23 373 396 373 396 0.95
6 12 1.8e-07 4.3e-05 25.4 0.6 2 23 403 424 402 424 0.98
7 12 4.6e-07 0.00011 24.1 1.0 1 23 430 452 430 452 0.95
8 12 5.2e-07 0.00013 24.0 0.4 1 23 458 480 458 480 0.99
9 12 3.7e-07 8.9e-05 24.4 0.5 1 23 486 508 486 508 0.98
10 12 0.00027 0.064 15.4 0.3 1 23 514 536 514 536 0.98
11 12 0.0001 0.025 16.7 2.5 1 23 542 564 542 564 0.97
12 12 4.6e-06 0.0011 21.0 0.8 1 23 570 592 570 592 0.98

Sequence Information

Coding Sequence
atgtctAATCCATTTAAGAATTTATGCAGAACTTGTCTGCAATCGGGTACTGCTCTACTTTCATTATTTGATAAAAAGCAATCGAAAGAGGTGTCCGCGGGAGCCTATTCTATTGCGGATATGCTGAAATCGATTACTTCAATTGTGGCTGCAGACAGTGATGGTCTACCAAGCAAAGTTTGTATATCCTGCATAAGTGAAATAAATCGAGCATTtgcctttaaaataaaatgtgagaAATCGGAGGAGACGCTCAAGCAGTATCTTGATCAGGAAGCTTCGGAAGAAATAGATAACGAAGAACACAAATCATTGCAAAATCCTGAATTCATTAAGTATGAGGATTTAGAACCACATGAAATTCAAAATCTTAACTTGACCCATCAGGAAGACAATGATGAAAAAAATGATCAATCCCATGTCACTGAGGAGGATGctgaagaaaaaattgttttgcaggAGACAGAGGATCTTACCGATGAATTATGCGAGTTTTCTGACTCTGAAGATCGGAATCATTTCACGATGGAAGATGCTGACGAAAGTGAGAATCTAGAACAGGAAGGCGAATCCTGTACCTATGAATGTGAAAAATGCAAAGAACACTTTAGTGATAAAGAGGTTCAAATCCATATAGAAAGATGCTTTGGAACTAACGAAACTAAGAAAGCAAACAAACAGAAGCCAAAATCCGTAAAAAAAGAGCCCATCAAATGTCCGCACTGTCCAGTAGATTTTGTTCATCCTAAGAATTTAGATAAGCACATTAATAAATGCCATAAATATCTTTTATCACCaagtaaaagcaaaaaaatggaTATAGATAATCAAACGACTGAAGGTGAAGAGGATAGCTTGCCAGAAACTTTTGATATTGAGAACGAAGAGACTATAATCGAAGCAATAGAAGAGTCAGCTATTAAGCACCAACCTGCAGAGTTACCTGAATGCCCTTACAAATGTACTCAATGCGGAGCTGGTTTTGCTCAGGAAAAATCCttaaatattcatataaaacttaataaatGCACCGAAGAAGTGTTTGAATGCCTTGTGTGTAAGAAAGTTTTTATAACAAAGCGCAATTTGGTGCATCATATTAAAACGCATGCTAGTTACGAATGCTCAAAGTGCTCGAAAACATTTTCCCGCCAGGATAAGTTGAAAGCTCATCATGATGTGGAGCATAATGGAATAACAAAGAATCAATGCCCCATGTGTGGAAAAGTATTCACAATGCTTTCTACGCTTAAAGATCATCTTAGAACACATAGTGGTGAAAAACCTTTCCTCTGTTCGGTATGTGGCAAAGGATTTAGTCAAAACACAAACTTAAAGCAGCATTTAATGCGccataataaaacaaaaccattCAAGTGCGAGGAATGCAATAACTCCTTCGTTAGTAAAGGAGAATTAAATGCGCATATAAGAAAACACACCGGGGATCATCCGTTCGTTTGTGATACTTGCGGCACTGGTTTTACAACATCTAGCTCTTTAGTAAAGCATCGTCGCATTCACACCGGAGAAAGGCCATATGCATGTGAATTCTGTCCAATGAGATTTGCAGCATTAGGTACCTTAAAAAATCATAGGCGAACACATACTGGCGAGAAGCCGTTCGCTTGTAAATTTTGTGATCGGGCTTTTGCCCAGAAAAGTGATTGTGTATCACATATGCGAACACATACTGGGGAAAGACCGTATGTTTGCAATGTTTGCGGATTATCATTCCAACAGTGCGGCACACTGAAAGCTCACATGAAAGCACATACTGGTGAGCGATGTACATCTGAATTTAAGGCAGAAGATCTACAAATTACTGAGGATAAATCTAATTTTGGTCCAATCTTAATAACTGATGATGTTCTGTCGGAATCTCAAGTATATGAAGCCAACGCTGACGAACTGGCAGGGGAGATTTTATAA
Protein Sequence
MSNPFKNLCRTCLQSGTALLSLFDKKQSKEVSAGAYSIADMLKSITSIVAADSDGLPSKVCISCISEINRAFAFKIKCEKSEETLKQYLDQEASEEIDNEEHKSLQNPEFIKYEDLEPHEIQNLNLTHQEDNDEKNDQSHVTEEDAEEKIVLQETEDLTDELCEFSDSEDRNHFTMEDADESENLEQEGESCTYECEKCKEHFSDKEVQIHIERCFGTNETKKANKQKPKSVKKEPIKCPHCPVDFVHPKNLDKHINKCHKYLLSPSKSKKMDIDNQTTEGEEDSLPETFDIENEETIIEAIEESAIKHQPAELPECPYKCTQCGAGFAQEKSLNIHIKLNKCTEEVFECLVCKKVFITKRNLVHHIKTHASYECSKCSKTFSRQDKLKAHHDVEHNGITKNQCPMCGKVFTMLSTLKDHLRTHSGEKPFLCSVCGKGFSQNTNLKQHLMRHNKTKPFKCEECNNSFVSKGELNAHIRKHTGDHPFVCDTCGTGFTTSSSLVKHRRIHTGERPYACEFCPMRFAALGTLKNHRRTHTGEKPFACKFCDRAFAQKSDCVSHMRTHTGERPYVCNVCGLSFQQCGTLKAHMKAHTGERCTSEFKAEDLQITEDKSNFGPILITDDVLSESQVYEANADELAGEIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01432429;
90% Identity
iTF_01432429;
80% Identity
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