Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979698.1:48288489-48300386[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3e-05 0.01 17.9 2.7 1 23 372 394 372 394 0.97

2 18 1e-05 0.0025 19.9 0.4 1 23 400 422 400 422 0.97

3 18 5.8e-05 0.014 17.5 1.7 1 23 428 450 428 450 0.98

4 18 2.9e-06 0.00071 21.6 3.0 1 23 456 478 456 478 0.97

5 18 3.9e-05 0.0095 18.1 4.7 1 23 484 506 484 506 0.99

6 18 6.8e-05 0.016 17.3 5.6 1 23 512 534 512 534 0.97

7 18 3.3e-07 8.1e-05 24.6 4.3 1 23 540 562 540 562 0.98

8 18 1.2e-07 3e-05 25.9 2.4 1 23 568 590 568 590 0.97

9 18 0.00017 0.041 16.1 5.7 1 23 596 618 596 618 0.97

10 18 6.7e-05 0.016 17.3 6.4 1 23 624 646 624 646 0.98

11 18 1.8e-05 0.0044 19.1 4.7 1 23 652 674 652 674 0.98

12 18 4.2e-05 0.01 18.0 8.3 1 23 680 702 680 702 0.98

13 18 2.1e-06 0.00051 22.1 7.7 1 23 708 730 708 730 0.98

14 18 7.5e-07 0.00018 23.5 7.7 1 23 736 758 736 758 0.98

15 18 0.00023 0.057 15.6 9.5 1 23 764 787 764 787 0.95

16 18 0.0002 0.048 15.9 0.5 1 23 793 815 793 815 0.97

17 18 0.00085 0.21 13.9 4.3 1 23 825 847 825 847 0.99

18 18 2.2e-05 0.0052 18.9 2.4 3 23 855 876 853 876 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3e-05	0.01	17.9	2.7	1	23	372	394	372	394	0.97
2	18	1e-05	0.0025	19.9	0.4	1	23	400	422	400	422	0.97
3	18	5.8e-05	0.014	17.5	1.7	1	23	428	450	428	450	0.98
4	18	2.9e-06	0.00071	21.6	3.0	1	23	456	478	456	478	0.97
5	18	3.9e-05	0.0095	18.1	4.7	1	23	484	506	484	506	0.99
6	18	6.8e-05	0.016	17.3	5.6	1	23	512	534	512	534	0.97
7	18	3.3e-07	8.1e-05	24.6	4.3	1	23	540	562	540	562	0.98
8	18	1.2e-07	3e-05	25.9	2.4	1	23	568	590	568	590	0.97
9	18	0.00017	0.041	16.1	5.7	1	23	596	618	596	618	0.97
10	18	6.7e-05	0.016	17.3	6.4	1	23	624	646	624	646	0.98
11	18	1.8e-05	0.0044	19.1	4.7	1	23	652	674	652	674	0.98
12	18	4.2e-05	0.01	18.0	8.3	1	23	680	702	680	702	0.98
13	18	2.1e-06	0.00051	22.1	7.7	1	23	708	730	708	730	0.98
14	18	7.5e-07	0.00018	23.5	7.7	1	23	736	758	736	758	0.98
15	18	0.00023	0.057	15.6	9.5	1	23	764	787	764	787	0.95
16	18	0.0002	0.048	15.9	0.5	1	23	793	815	793	815	0.97
17	18	0.00085	0.21	13.9	4.3	1	23	825	847	825	847	0.99
18	18	2.2e-05	0.0052	18.9	2.4	3	23	855	876	853	876	0.95

Sequence Information

Coding Sequence: ATGGTATCGTTACCAGCAAAGCCGCTTCAAAGGATTTGTTCAACTTCTTCGAGTGAACAACATCATAGTGATCCCGGTGAACCATCAACAAGCCTTGGTAAATATTGGGTTGTAACAAATTTATTTCCAAATCCGGGTCAGGGGACTTACAATTTAGGATCGCCACCAACAACGTCGACAGTTCCCTCGTTACCTCCTCCAATATCATCTACACATACGTCAACAGCAGGCTCATTGGTAAAACTAGATACAATTAAACAAGAAGAAAATCACATGCAACGTGTCCAACAGCAACAccagcaacaacagcagcaacagcagcagcagcaacaacaacagggTGTTGCTGCCACAACAGTAAGCACAAGTACGATACAAATACCGAATCCTATGATTAATGTAACAACAAGTCAAAGTGGACAAATGTCTAATGGAACAATAATTTCAACTTCGGCTCAGCCAGAGCAAATTCAGGTATCTGTCAATCCTGAAAATACCATGATGGTAATGGATGCTACCAATTCTGGaaccaaaaatgaaaaaattccaaatatgAATACACAAGGAATAAATAATGACCAAATGGCTACAGATCGGCCTATGTCTCACACAATGCAAGAAAtagtaaaagaagaaaaaccatTTCCTAATTTAAAGCCTCCCCCTCATCAGCAAGTTCATGCTCACCACATACCAGATTCAAAAACACACGTCCCACATCTATTAGATGTTCGGAACCCTGACGGTTCTATTGTTAGAATTCCTCCGCCTACCGACCAAGAACTAGGCAAATCCTTAGGTGTggaaatgtataaagttaacaTCGAAGATTTAAGCCAATTTTTATCATATCATGAAGTATTTGGAAAACTTCATGGAGATGTAATGAATCATCAAATTTCTCATTCCGCGACACATCCTACAAATACAATCAGTAATGCATCGGGCGTTCCCACTTCAACTAATGGAGGAGCTATAGTCGGAAATCTAGCAACTACAACTGGAGAACTTTTAATGCCAAAAATGGAAGTCAATCAAATTCCTGGAATTACTTCACCTCATGGTCCTAACTCTCACACTATGGGAGACGGAACGTCTATAACGCCTGCGACACATAGTTGTGATATTTGCGGAAAAATGTTCCAATTTCGTTATCAATTAATAGTTCATCGACGTTATCACAATGAGAGGAAGCCTTTTAATTGTCAAGTATGTGGCCAAGGGTTTACTACTTCACAGGATCTAACGAGACATGGAAAGATTCATATAGGTGGGCCAATGTTTACATGTACTGTATGTTTTCATGTTTTTGCTAATGATGCAAGTTTAGAAAGACATATGAAACGGCATTCCACCGATAAGCCATTTGCTTGCACAATTTGCCAGAAGACATTTGCACGAAAAGAGCATCTTGAAAATCATTTTCGTAGTCATACAGGCGAAACACCATTTCGGTGTCAGTATTGTGCTAAAACATTTACTAGAAAAGAACACATGGTTAATCATGTTAGGAAACATACAGGAGAAACCCCTCACAGAtgtgaaatttgtaaaaaatcatttACTCGTAAGGAACACTATGTTAATCACTATATGTGGCATACAGGTGAAACACCACATCAATGCGAAGTTTGTGGGAAGAAATACACTCGGAAAGAACATTTAGCAAATCATATGCGATCTCATACAAATGACACTCCCTTCCGCTGTGAAATATGTGGCAAAAGTTTCAGTCGGAAGGAGCATTTTACTAATCATATTTTGTGGCATACTGgtGAAACACCTCATCGATGCGATTTTTGCGCTAAAACATTTACAAGGAAAGAACATTTGTTGAACCATGTTAGACAACATACTGGAGAATCGCCTCATCGTTGCACATATTGCTTAAAAACCTTTACGCGTAAGGAACACCTGGTTAACCATGTCCGCCAACATACTGGAGAAACTCCCTTTAAATGTACATTTTGTACAAAAGCTTTTACACGGAAAGATCATATGGTTAATCACATACGCCAGCATACTGGAGAATCTCCGCACAAATGTACATTTTGTACTAAAACATTTACAAGAAAAGAACATCTCACAAATCATGTTCGTCAACATACAGGCGAATCACCTCACAGGTGTTCATACTGTAAGAAAACATTTACTCGGAAAGAGCATTTAACTAATCATATCCGATTGCACACTGGCGACTCTCCTCATAAATGTGAGTACTGTCAAAAAACGTTTACTAGAAAAGAACATCTAAATAATCATATGAGACAACATTCAAGCGATAATCCGCACTGCTGCAATGTTTGCAATAAACCATTTACGAGAAAAGAACATTTAATAAATCATATGTCTCGTTGTCATACCGGAGATCGTCCATTCGCTTGTGAAACATGTGGAAAATCTTTTCCTTTAAAAGGGAACTTACTGTTTCATCAAAGAAGTCACACTAAAGGCCAGGATGTTGAGCGTCCATTTAGATGTGATAAATGTCCGAAGGATTTCATTTGTAAAGGCCATTTAGTATCGCATATGAGATCTCACTCTGGCGAAAAACCGCACTTGTGCACGTTATGTAGTAAATCATTTGTTGAAAAAGGAAATCTGAAACGTcatataaaaatgaatcatCCAAATGTGATGATACCACCTGCAATGCCTACAACTATAAAAACGGAAGCAACACCAGCGGCGAGTAGTTCACCACAATTCCTTAATGAACGCATCCATCTACTGACAAAGGCAAATTTATTGCCAATCAATAATTTGGTGCCTCATCAGCCACCAACTATGCATACTATACAACAAATTACTTCATCAGCTGGTAATGCAAATGCAGGCAGTACTAATAACACAACTTTACCGGGTGGGTTGGTACCAATTGTTACATCAACAATAACATCACATACAAGCCAACAACAGCAGCATGTATCATCCCAGATGCATCAGCCTCCACCAACTCATCATCAACAGAATAACAACAATCCCCCTGAACAGCCCCCTTCGTCGGTACCGATTACAATCATTCAAGCTGGTGACCCTTCTGCAATTGCTCGTGCTGCTATCCAACTACAGCATTTGCCCGCAAATATAGAGCAGCATCCGGTAGTTTATTAA
Protein Sequence: MVSLPAKPLQRICSTSSSEQHHSDPGEPSTSLGKYWVVTNLFPNPGQGTYNLGSPPTTSTVPSLPPPISSTHTSTAGSLVKLDTIKQEENHMQRVQQQHQQQQQQQQQQQQQQGVAATTVSTSTIQIPNPMINVTTSQSGQMSNGTIISTSAQPEQIQVSVNPENTMMVMDATNSGTKNEKIPNMNTQGINNDQMATDRPMSHTMQEIVKEEKPFPNLKPPPHQQVHAHHIPDSKTHVPHLLDVRNPDGSIVRIPPPTDQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVMNHQISHSATHPTNTISNASGVPTSTNGGAIVGNLATTTGELLMPKMEVNQIPGITSPHGPNSHTMGDGTSITPATHSCDICGKMFQFRYQLIVHRRYHNERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVERPFRCDKCPKDFICKGHLVSHMRSHSGEKPHLCTLCSKSFVEKGNLKRHIKMNHPNVMIPPAMPTTIKTEATPAASSSPQFLNERIHLLTKANLLPINNLVPHQPPTMHTIQQITSSAGNANAGSTNNTTLPGGLVPIVTSTITSHTSQQQQHVSSQMHQPPPTHHQQNNNNPPEQPPSSVPITIIQAGDPSAIARAAIQLQHLPANIEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628542;
90% Identity: iTF_01432424;
80% Identity: -