Tnob043999.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- -
- Assembly
- GCA_963855945.1
- Location
- OY979697.1:51836603-51836938[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 6.5e-05 24.3 0.0 5 38 1 35 1 39 0.92 2 2 3.9 2.1e+03 0.3 0.0 24 38 75 90 74 94 0.79
Sequence Information
- Coding Sequence
- ATGAAATTAGCCGTTCAAGAAGTTTTGGATGGAAAAAGGGGTTATAAATCAGCCAGCAAGATATATAATGTCCCCCAAACCACACTCGAGCGTAAAGTTAACCAAGCCAGACAAAATGGGAATAGTATACCAAATGTCAAGGTTCCTTTGGGTCCAATTTCAACAGTTTTTTCCgcagaagaagaacaagaacttgtcacttatttaaaagaaatggaaGGACGGTTGTTTGGTTTGTCAACTTCAGAATTGCAGAAATCAGCGTATGAGTTAGCAGTTCGTAACAACAAACAGCATAAATTTAATGGTGAAAAGGGAAAAGCTGGTAAGGACTAG
- Protein Sequence
- MKLAVQEVLDGKRGYKSASKIYNVPQTTLERKVNQARQNGNSIPNVKVPLGPISTVFSAEEEQELVTYLKEMEGRLFGLSTSELQKSAYELAVRNNKQHKFNGEKGKAGKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -