Tnob007434.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- -
- Assembly
- GCA_963855945.1
- Location
- OY979694.1:109154487-109156421[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-11 5e-08 34.3 0.0 3 35 18 50 17 53 0.95
Sequence Information
- Coding Sequence
- aTGGCTCCACGAAAACctattttacaaagaaaacgCCAGACTTGGTGCAAAGATTCAATGAAAAAGGCAATCGAAGATGtgcgaaataagaaaatggGCTCACTAAAAGCTTCCAAGCTGTATAATGTACCCCGAACAACTTTAAGACGTTTGGCAGCTAAAATAGATCTACCAGCCGATACAGTGACTTGTGCGAAGTTGGGAAGTAAACCTACATTACCTCAAGAGCTAGAAAAACAATTAGTGCAATATGTATTAGCAATGGAAGCTAAGTTGTTCGGTTTAGTGCGAAAAGATGTCATGAGTTTAGCCTATCAGCTGGCAGTGAAAAACAATATCACGCATAAATTTTCGGCAAAAAATGAAAGCGCCGGTAAAGATTGGTTAAAATCTTTTTTAGAAAGGCACCCGGAACTTTCTTTTCGCCGTCCAACAGGAACTTCATTCGCTAGGGCTAGGGGATTTAATAAGGAAAGTGTGGACCATTTCTTCAAcctttatgagaaattgatgGATGATTATAAGTTCCCTCCTGATAGAATTTTCAATGTGGATGAGACTGGTATAAGCGTTGTTCCATCCCAAATGCCCCAAGTTCTGAGTCAAAAGGGGAAGCGGCAAATTGGTGCTTTAACATCTGCTGAAAGGGGTTCTTTAATAACATGCGTGATAAGCATGAACGCTGGAGGTTCATTTGTTCCACCCATGATTATATTTCCTAGAAAAAGAAGTCACCCGCTTTTGATGAAGGGTGCGCCTCCTGGTGCTATACATGAATGTCACCCTTCCGGTTGGATTCAAACCAACTTATTTACAAAGTGGtttcaacattttattcaaCACATGAAACCCACAGAAGAATCTCCGGTATTGCTTATTCTAGATGGCCATACAAGTCATACAAGAAATCTTGAATTGATAGATCTTGCAAGAAAAAATCATGTCCACTTACTATCAATTCCTCCACATTCCAGCCACAAAATACAACCACTGGATAAGTCATTCATGGGAccactaaaaaaatatgtttctgATGAAATAAGATCATGGGTCAGGAACAATACACGGCCACTAACTCAATATGATATGATGGAAGTTTTTGGACACGCGTATCTACGAGCTCAAAGCGGTGAGATAGCTGTTAGTGGTTTCCGTGCAACAGGGTTATACCCTGTTGACAGAAATGTTTTTAAAGATCACGATTTTATAGATATGGATAATGACCAAGAAACCAGCATCACCAATCAAGAAAATATCGCACCAGAACTTACAACTTCATCTTCTACTCCTACAATAAGAAATGAATCTGTTGACACTACACCCTCCATAAATGAACCTGCTATGAGTAATGTGATGCCTAGTGAAGCGATCTCTGCGTTAAGAGACCAGAACAAAAATCCGCCTGTATGTTCTGAACAAGTTCTAGAGTCCGTCGCGAGATCTCCACAGCCATCGACTTCAAAAGATCAGAACTTTATAACGCCGTTCCAGTTATCTCCGATACCAGAAATAGCACCTAGGAAAACTACTAACCGAGGCAGAAAGGCTGCTAAATCGACATTGCTTACTTCATCCCCGTACAAAAAAGAATTGCAAGACtcattaaaaaagaaaactgaTAAAATCGAGAAGGCTTCTATGGACAAAGGCaaagacaaaaaacaaaaaggcaTAACGACAAAGTCAAAAACGAAGGAGGTACAAATGTCAAGTTCGGAGGAAGAAAATGAACCTTTGTACGACGACAGTTCTGACGAAAGTCCTGATAGAACTAATGCTTCCGATGCAAAGTGTTTGTATTGCGAGGATCTTTATTCGATGGATAACAGAGGCGAACCATGGATTCAATGCCTATGTTGTAAATTATGGGCTCACGAAGAATGTTCAGGAGTGGAAACTGACGTTTTTTTCTGCGAATTTTGTTCTGCAAAATAA
- Protein Sequence
- MAPRKPILQRKRQTWCKDSMKKAIEDVRNKKMGSLKASKLYNVPRTTLRRLAAKIDLPADTVTCAKLGSKPTLPQELEKQLVQYVLAMEAKLFGLVRKDVMSLAYQLAVKNNITHKFSAKNESAGKDWLKSFLERHPELSFRRPTGTSFARARGFNKESVDHFFNLYEKLMDDYKFPPDRIFNVDETGISVVPSQMPQVLSQKGKRQIGALTSAERGSLITCVISMNAGGSFVPPMIIFPRKRSHPLLMKGAPPGAIHECHPSGWIQTNLFTKWFQHFIQHMKPTEESPVLLILDGHTSHTRNLELIDLARKNHVHLLSIPPHSSHKIQPLDKSFMGPLKKYVSDEIRSWVRNNTRPLTQYDMMEVFGHAYLRAQSGEIAVSGFRATGLYPVDRNVFKDHDFIDMDNDQETSITNQENIAPELTTSSSTPTIRNESVDTTPSINEPAMSNVMPSEAISALRDQNKNPPVCSEQVLESVARSPQPSTSKDQNFITPFQLSPIPEIAPRKTTNRGRKAAKSTLLTSSPYKKELQDSLKKKTDKIEKASMDKGKDKKQKGITTKSKTKEVQMSSSEEENEPLYDDSSDESPDRTNASDAKCLYCEDLYSMDNRGEPWIQCLCCKLWAHEECSGVETDVFFCEFCSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634390;
- 90% Identity
- iTF_01430689; iTF_01430713;
- 80% Identity
- -