Tnob003067.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- -
- Assembly
- GCA_963855945.1
- Location
- OY979694.1:61058443-61060578[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-11 1.3e-08 36.1 0.0 4 40 7 44 4 47 0.90
Sequence Information
- Coding Sequence
- ATGCAATATACAAGTGCCTCATTGGAGAATGCATTGAAAGCAATTAATGATGGAGCTATGTCTATCAGAAAAGCAGCTACAGCATTCAATGTCCCAAGAACAACGTTAATagataaacaaaagaaaaatcatTCAGATCACATCGGCGCGCCAACCATTTTCGCAAATAAGGAGGAAGATTTGTTAGTGAGATGGATCATTGAGATGGGAGAAAAAGGCTTTCCAGTCACAAGACATCAACTAATTGATTCTGTTGGTAAGTTAGCCGAAGAATTAAACCGACCTAATCCATTCAAAAAAGGAGTTCCTGGGAGAAAATGGGTTCAATCATTCCTCAAACGCCATCCAAATATCAGTCGCAGAATTTCCCAACCATTGTCAACATCAAGAGCTACTGTTAATGAAAATAGCATCAGAAATTGGTTCAAGCAGGTCCGTgcctatttgacagataatgaaCTCTTACATATTATGGAGAACCCTAAGCGAATTTTTAATAGTGATGAGAGTGGATTTTATTTGACGCCAAAAGATAACTCCGTCCTAGCCAGAAAAGGTGCGGATGGAAGTATTCAGCCTCCAATGGTGTTATACCCATATAAACAAAGGATACCGGGAAATATTCACTCAAGTTATCCAAAAGACTGGGGAATTGGCAGATCTGAATCCGGTTGGATGACGAGTGAAgtattttttgaatatattgcAAATGTTTTTTATCCATGGCTTGTAATAAATAACATTCCGCTGCCAGTACTATATTTCGTCGATGGGCATGCTTCCCATTTAAACATTCACGTTTTAGAATTCTGTAAAGAAAAGGGCATCATATTAACGGCATTTCATCCCAACGCCACCCACATTTTGCAGCGACTTGATGTGGCTATATTTCGTCCTATGAAAAACGCCTGGAAAAATGAAGTGCGAAATTGGCGTATGGAGAATAGTGGCGAACGCATGAAAAGAGAGGACTTTGCACcaaatttaaaatcaaccatagacaaaacaatttcaaaggaACTTATTCAGAAAGCTTTTCAAACTTGTGGTATATTTccatttaatgaaaataatattcatTATGATAAGTTTGTTAGAGAGATCGATGAAAACAATGAACAACCAAAAATCGCAGAAAGTAGTGAAAACCCAACTGATTATAACGTTTCAAAGCAAAGACAACCATTGCAAAGTGATGATGAGTTTTTATTAGCTCTAGAACAAAGGATCGATCCTCTATTAgttcttgaatttaaaaatagcGGAAGTGAATGGAAAGGTGAAATACATCATCGAAGCCTTTTTGAATTATGGAAAAAAGTGACACGTCCAGATaatgaaaatgaattagtaattttaaatgatGCTGAGGTCTGTTTAGAATCAAGCAATTTAACGGAAGCCACATTTAACGAAAATTTGTGGTCAAACAATATTATTACTGGCATTGTGGATGACAACGGGGTTGTCAATATTATAAATGAACCCCTAGAAAAAACACCACAAAAAGATATAATTAATAAGAACGGCTTTACATCGCCATTTAAAAAAGCCTTATACTGGccggaaataaatataaaaaaaagaaaatctgcCAATCTAACtgacgaaaagaaaaaaataagaaaaataacgCCAGTAGTAGCCGTCAATACAGAATTTTTGGAACATCGGCAAACATTAGAGAaccagaaaaaaatcaaagaaaatcaaaaattcgaaCGACAGAATAAAAAGATGAACATAGTAAGGAAACCAACTATGGATATGAACATTGAAACTTTGCAGCCATGTTACTTAGAAGGAGAATTTGTTGTAGTGCAATATGAAGGAGAATTTTTCCCTGGTACAGTGTTGGAGAGTGATACAAAAATAGTTAAAGTAAAAACAATGACAATGAGTGCTAACAATTGGAGGTGGCctgaaaaagaagacatttgTGATTATTTTATAAAAGATGTGATATGTAAAATTCCAGTGCCTGAGTTGCTCCACAGTCGAGGTGTTTTTAGCGTTCCTACAATTAATAATCTGagagataaacaaaaaaataatattggacAATAG
- Protein Sequence
- MQYTSASLENALKAINDGAMSIRKAATAFNVPRTTLIDKQKKNHSDHIGAPTIFANKEEDLLVRWIIEMGEKGFPVTRHQLIDSVGKLAEELNRPNPFKKGVPGRKWVQSFLKRHPNISRRISQPLSTSRATVNENSIRNWFKQVRAYLTDNELLHIMENPKRIFNSDESGFYLTPKDNSVLARKGADGSIQPPMVLYPYKQRIPGNIHSSYPKDWGIGRSESGWMTSEVFFEYIANVFYPWLVINNIPLPVLYFVDGHASHLNIHVLEFCKEKGIILTAFHPNATHILQRLDVAIFRPMKNAWKNEVRNWRMENSGERMKREDFAPNLKSTIDKTISKELIQKAFQTCGIFPFNENNIHYDKFVREIDENNEQPKIAESSENPTDYNVSKQRQPLQSDDEFLLALEQRIDPLLVLEFKNSGSEWKGEIHHRSLFELWKKVTRPDNENELVILNDAEVCLESSNLTEATFNENLWSNNIITGIVDDNGVVNIINEPLEKTPQKDIINKNGFTSPFKKALYWPEINIKKRKSANLTDEKKKIRKITPVVAVNTEFLEHRQTLENQKKIKENQKFERQNKKMNIVRKPTMDMNIETLQPCYLEGEFVVVQYEGEFFPGTVLESDTKIVKVKTMTMSANNWRWPEKEDICDYFIKDVICKIPVPELLHSRGVFSVPTINNLRDKQKNNIGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431792;
- 90% Identity
- iTF_01430697;
- 80% Identity
- -