Tnob017923.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- bab1
- Assembly
- GCA_963855945.1
- Location
- OY979694.1:227152047-227154012[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-11 5.9e-09 37.2 0.0 4 45 368 409 365 409 0.92 2 2 2.1 1.1e+03 1.2 0.8 4 20 500 515 499 515 0.91
Sequence Information
- Coding Sequence
- ATGGGAAGCAATGAGGGCCAGACCTACTGTCTACGATGGAACAACCACAAATCAAATCTTGTGGAAATCCTCGACGCTCTCATCAAAATGGAGAGCTATGTAGactgtacaattgttgttgaTGATCAAGTGCAATTTAAGGCGCACCGTGTTGTTCTGGCAGCTAATTCACCATACTTTCAATCCATCCTTCAAGATGTTCCAATGGATCATTGCAGTATTCTATTTCCTGGTGTTCAAGCATTCGAAATGCGTGCCTTGCTGGAGTATATGTATACTGGTGAAGTGAATGTGACACAGAGTCAAATTCCAAAAATAATGAAGATAGCAGAACAGCTAGAGGTTAAAGGACTGTTTGATATGACTGATCTCAAggagaaatttaataaatttgatgACCGTCCTTCACATTATCCTGCTGCTCATACACCGACACCCAATTATCCTGGCAAGGGTAGtgaacagcaacagcagcaacaacaacaacagcagcaatcTTCACCGGTGATAACAACATCGACCAATGTTACATCAGCACAGAGCAGCAGTTCATCGCCACCGTATACTTATAAATCACcatattcaaatttatattcCAAGAGTCCTGGACCATCAACATCAGAGCGACAACCACCGCAATGGCCTCTTTCACCTCACCTGCAGAGCTCAATACCtggtgcagcagcagcagcaatgtTGAGTTCAGTTTATGAAACAGGACCAGATATGAATCCTCTTAAAAGGAAGAAGCTCTCTTCGATCTCGAGTATGTTGATGTCGAGGGATACTCCAATATTACGAAATGTTCTAGCTCAATCGCATGCTGCTGATTCATCTCAACCGATGCCTCTAGTCTGTCATCCAGTAAAGCCGGAAAGGGTGGAAAAGCAAGGATCAAACAATTGCAATGGATCTGATTATAGTTCAGAAAAGAAGAATTTGAAGTATGACGAACCACATTCACCATATACAGACAAATCTTTCGAAGATGATGGTCTAGATTGTCCACCGAATTATCCCGGAGATTCTCGCATGTCATCATATTCCTCTCAGCAACAGCAAAAGCCAGAATGGAAACGATATAAACAGTATACTAGAAGTGATATATTGTCAGCAATTGAGTGCGTTCGAAATGGTATGAGTGCGCTGCAAGCTTCAAGGAAATTCGGTGTGCCTTCAAGAACACTTTACGATAAGGTAAAGAAGCTTGGTATTACAACAGGTCGCCCAATGAATAGAACAATTAAACGAAGTCCCAGCAGTGGTGGTAGTCCAGGATTCCCATTTAATATGGGCGGTTCTGGACACCATTTTGGCCAGGGAGAACCTATGCTTTCACAAATGCATGATCCTAGTGAAAGGGACAAGGATCGAGAACATCATCTACCACCATCGATCCCACATCCTGCAGCCGCTTTGCTTGATCCTGCATTTCTGCAGCAAGCTTTTGAGGGTCGTGGCGGTGATATAGGAGGTCGAGAGGCACTACATGCTATGGCTCTTGCCGCTGCAGCACATGCAGCTGTTAATGGTATATCAACAAGTCCTGGCACTAATGGTACTGCACGATCTCCTAGTCCTGCGCTCGCTCTTAAGTATGCAAGACCGCAAAGTCCACAGCATATGAAACGTGAACCAGAACTAAGTATGGAAGAAGACGAAGACAGAGTTGAAGACTTATCGATATCAAGAAAAGAGTCACATAGCCCACCGCCACCAACATCATCCCACCATTCTTATCATCATCTTCAGCATCAGCAGCAACAGCCACCGCAACAAAATCCACACCAGCAAACAGGAGTTATAGTTCCACCACTGACTATGATTCCATCGAATGGTGGCGGCGAAGACTACACAAGTTCTGACCCAAAAAGGGAATGTTTAACTACCGACGATTCTAGAGACTAG
- Protein Sequence
- MGSNEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFDDRPSHYPAAHTPTPNYPGKGSEQQQQQQQQQQQSSPVITTSTNVTSAQSSSSSPPYTYKSPYSNLYSKSPGPSTSERQPPQWPLSPHLQSSIPGAAAAAMLSSVYETGPDMNPLKRKKLSSISSMLMSRDTPILRNVLAQSHAADSSQPMPLVCHPVKPERVEKQGSNNCNGSDYSSEKKNLKYDEPHSPYTDKSFEDDGLDCPPNYPGDSRMSSYSSQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSSGGSPGFPFNMGGSGHHFGQGEPMLSQMHDPSERDKDREHHLPPSIPHPAAALLDPAFLQQAFEGRGGDIGGREALHAMALAAAAHAAVNGISTSPGTNGTARSPSPALALKYARPQSPQHMKREPELSMEEDEDRVEDLSISRKESHSPPPPTSSHHSYHHLQHQQQQPPQQNPHQQTGVIVPPLTMIPSNGGGEDYTSSDPKRECLTTDDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431041; iTF_01431762; iTF_01432170;
- 90% Identity
- iTF_01431041; iTF_01431762; iTF_01432170;
- 80% Identity
- iTF_01431041;