Tnob034180.2
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- lolal
- Assembly
- GCA_963855945.1
- Location
- OY979696.1:79260533-79273109[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-17 1.3e-14 55.4 0.0 2 45 437 481 436 481 0.96
Sequence Information
- Coding Sequence
- ATGTGGTCGTCTGGGACATCTTCCGCATCCGTCAACTCGTCCCAGTATCGGGCGACACTTTTCACGTCCAATCCTTGCCAGCACCcaattgttattttaaaagatgTACAATATAATGACCTTAAAACAATGGTCGACTTTATGTACTATGGTGAGGTGAATGTCTCACAGGAACAATTACCACATATATTGAAAACTGCAGAAATGCTAAAAATAAAAGGACTAGCGGAAATGCCAGATGCAGCTGCATCTTTAACAAAATCTGAAAGTAAATCTACATCAGATCAAACTGATACACTGCAAGGAGCTGGTAGCGGTTCAGAATCCATATGgggaagtgcagaatcgcaatttcaacatcatcatcatcatcatcaaacaCAAACGCAGCCCCAACATCATCAACAAAGGAGATCTCCTTCGCCAGCAGGTGCTGGAGCATCACCAGCTACACGAAGAAAAAGATTAAGAAAATCGTCAAACAGTGGTTCAACAGAAAGAACATCAGAAGAACAGAGTAGCATAGAGGGATCATCGAATATAAATCTTTCTCAAATGAGCCAAATGTCATTTGGAGGAAATGCATCAAATTTAGCGCAAACAAttcattcaaaaataattaaagaaagttCTAGTACAGATACCGAACCTCACCCACAAGATTCGTCCCAGGAGAGTATGGAGGATTCAACTGCTCACCACCATGTGCAACAAATCaaaCCTGAAAACGAAATTTCCGGAGTTCAGCAGGCTTTACCTCTTGATATATCTGGGCCTGGTACGCCATCTGAACACGATCCACCCTCAGTTACTTGCTCGCAGTCTCAATCATCGCATTCGGGTGTGCAATGGACGGTTGTCGACTCAAATTATCCACGATTTTCGCTGCCAGCTTGTCAAGGTAGTATTTCAATTGGTGATAATAGTCAAGCCGGAGATAGTGCGAACAATACAACAAATGGTCAACAACAAAATGCTAGCACGTCAACGGGGAATTCAGTTGTTACAACGAATCAGCAGGCAGGCCATATACAAATGCAATATCAAGGCTCTTCATATACACCGCAAATAATATCTGTGAATAATCTTGTAAGTAGTTATTCTCAGAATTTATCAACACCAACATCACCAAACGGATCTGCAATGGTACAGTCCGTATACAGTCAAGGTCCAACGCCAACGCAGTCACCAGTTCATGCATTAACATCAACTGgaaattcaacaacaacaacagtagCAGCAACacaaaatcaacaaaatcaaGCTGCTGCACctcaaaaaaggaaaagatcTGTGAATCCTCAAGGGGATGAAAATTTTTTACGGGCATTAGAAGCTGTTCGAACGGGGGGTATTGGATTCTGCAAGGCCGCCCGTTTATATGGCGTTAATAATAGAACATTATGGTTAGAATATAAGAAACGTGGATATCCTATTAGTAGGCCCAGTATTAAGAATCGTATAAAGCTTGAGCCAAATATATCACCGCCACCACCATCAACACCTAATAATGAGGAGTCAACAATTGAAAATTATGAACATATTAATCAGCCAGCTATTAACATGCAAGTTCCTCCAACATCAGAAACTCCAACACCAATTATGTGTACGCCACATCATCAAATGGGTGTTATGAGTTTCCTTGACACCAGACACATGGAATTCCCATCGGGTATACATACAATGTCACGTCAGCGATATACAGACAGTGCTGTTAATGTTAATCCAGCTGCTATGAACTTGCAAGGCCTCAATTTTAATTCCATGTAG
- Protein Sequence
- MWSSGTSSASVNSSQYRATLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSTSDQTDTLQGAGSGSESIWGSAESQFQHHHHHHQTQTQPQHHQQRRSPSPAGAGASPATRRKRLRKSSNSGSTERTSEEQSSIEGSSNINLSQMSQMSFGGNASNLAQTIHSKIIKESSSTDTEPHPQDSSQESMEDSTAHHHVQQIKPENEISGVQQALPLDISGPGTPSEHDPPSVTCSQSQSSHSGVQWTVVDSNYPRFSLPACQGSISIGDNSQAGDSANNTTNGQQQNASTSTGNSVVTTNQQAGHIQMQYQGSSYTPQIISVNNLVSSYSQNLSTPTSPNGSAMVQSVYSQGPTPTQSPVHALTSTGNSTTTTVAATQNQQNQAAAPQKRKRSVNPQGDENFLRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPPSTPNNEESTIENYEHINQPAINMQVPPTSETPTPIMCTPHHQMGVMSFLDTRHMEFPSGIHTMSRQRYTDSAVNVNPAAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431754;
- 90% Identity
- iTF_01431754;
- 80% Identity
- iTF_01431106;