Tnob034183.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- ab
- Assembly
- GCA_963855945.1
- Location
- OY979696.1:79306519-79308047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.9e-15 5.3e-12 47.0 0.0 2 44 246 288 245 288 0.94 2 3 0.094 50 5.5 0.0 27 37 317 327 296 331 0.86 3 3 7.4e-17 4e-14 53.8 0.0 2 38 352 387 351 390 0.95
Sequence Information
- Coding Sequence
- ATGAACAATTTAAAGTGGATGGGCCATGCGGCCATTATGATAGAATCCCAGAAGGCACTACTTGAGGACTCGAGCTCCTGCGATGTTATCATTGCTTGTCAAGAGAAAAAATTTTATGCACATAAAGTTATATTATCCTCTAGCAGCGATTTCTTTCGTGAAATGCTGACAAGTTCACCAATAGACAAAGATGCTGTTATTATTATTCCAGATATTAAAGAAAACTTAATGCAAACTGTTCTCGATTTTATATATTTGGGCGAAGCTTGCGTCTATTCAATAAATCTGTCCGATTTTCTGGAAACTATTAATTTATTAGGAATAAAAAGTGCTATTAGCTTTGAATGCAAAACGCGTAAAAGGACAACAAacttatttatttcaaatgaagaaaGCGTTGATGTTAAAACCATCTCAAATGTGGAGGAAGAGGTAGTGGAACAGGAACAAGAGCAAAATGGCACAGAAAAAGATTACGAATATTTGGAAGTTTACGCTGAAGATGACAAAGAACAATATCAAATGGAAACTATGGATCAGGATTCCAGTAGTGAATTTATATTGGCAGAAACTTCCGAAAGTTCATTTAATATTGCTGAAGAAAGACCAGTCGGTGAAACAAAACATCCGGCATATATAGAAATTCCAAGCTGTTCTGAAATTGGCGGATATAAAGAAGACGAAGAAGATATAGATAAAGATAAAATATCATTAAATTCCCTGATGCAATCTAGGCATGAAGCATTTGAGGGTGCTGTAAATGCTGTTGTATCTTTGGGTATGAGCTTACAAAAAGCTGCTACAAAATATAACATATCAAAAACAGTTCTATGGCGACGCGTAAAAAAGCATCCCGGCTACAAAATTTATCGAGAAAATCCTCTTATGCAAACAGCAATTGGAAGATTACAAAATGGAGAATCGTTAAAAAGTATAAGCATGGCACTAGATATACCAATGTCTACTTTACATAGGTATAAAGTTCGATTACTTAATGAAGGAAAATTACCAGATAGTGTACCCGTTAGAAAACGTGAAACAAAAGAAACACAGAGAACAAGACTAGCAAGAGCCGTTGATGCATGTCATAATGGAATGTCCCAAAATCATGCTGCAGGAGTTTATGGAATACCGAAGTCTACGCTATGGCGacatttacaaaaagaaaagatAAAACACGTTAAAGACCAAATTATAGAAAAGATTGAACTAGAATTACCtcataaagaaattttacttAACACGCAAAAGCAGTGA
- Protein Sequence
- MNNLKWMGHAAIMIESQKALLEDSSSCDVIIACQEKKFYAHKVILSSSSDFFREMLTSSPIDKDAVIIIPDIKENLMQTVLDFIYLGEACVYSINLSDFLETINLLGIKSAISFECKTRKRTTNLFISNEESVDVKTISNVEEEVVEQEQEQNGTEKDYEYLEVYAEDDKEQYQMETMDQDSSSEFILAETSESSFNIAEERPVGETKHPAYIEIPSCSEIGGYKEDEEDIDKDKISLNSLMQSRHEAFEGAVNAVVSLGMSLQKAATKYNISKTVLWRRVKKHPGYKIYRENPLMQTAIGRLQNGESLKSISMALDIPMSTLHRYKVRLLNEGKLPDSVPVRKRETKETQRTRLARAVDACHNGMSQNHAAGVYGIPKSTLWRHLQKEKIKHVKDQIIEKIELELPHKEILLNTQKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01432208;
- 90% Identity
- iTF_01432208;
- 80% Identity
- iTF_01431074;