Tnob003944.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- -
- Assembly
- GCA_963855945.1
- Location
- OY979694.1:76076699-76090127[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.1e-10 2.8e-07 31.9 0.0 1 38 425 463 425 468 0.90 2 4 5.5e-13 3e-10 41.4 0.1 2 39 480 517 479 520 0.94 3 4 5.4e-17 2.9e-14 54.2 0.0 1 45 534 579 534 579 0.98 4 4 1.4e-17 7.4e-15 56.1 0.1 1 44 586 630 586 631 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGAATGCTTTAGGGGAACGCATTAGCCCTGAAACCTGCGTGGAGGTGAGCCAAACTATCGCAGATGGTGTTGGAGCACATCCTCTCAGGCAAGGGAGGAGCAACGCCCTGgGCCTTCTTCGAACTGCTGAAcagttaaaaataaaaggtcTCTGTGAAACAGCTGAAACGGTAGATGATATATCAACAgaagcagcaacaacaacaacaataacagtGCCAGAATCGATAGCCCCACCGATAACAAATATAACAAATGCAAATACATTAACACATACAAATAATTCACAGCGTAAATCACGTGTAAGAAAACGTTCTAAATCACCGGATCAGAATCAAACAATTGTCGcaacaaatcaaaattttaatacatCAGCCATCGTTAGCTTAAATCCTTCATCGACAATCACTTCAGGTGGTACAACGGTATCCGGTGGATCTGCGATAACAACAACTGccataacacattttaaaagtGAACATCAACAGCAAGTTACTAGCTCCAATACTGACAACGTTTCAGAGGATATAAAGCCGGCAAAAATTTGCAAAACTGAAGATTCATCGAATAATGGAAACGGGGTTGTTGCCCCTGGAACTGCTATTGTAACACAAATTGTGGTTGCGAGAGACGGCAAAGATAAAAATATGACTAGCTTGGGTATGGGAATGAATGGGGGCCTGTTGGGGGTGCCAATGGGTTTCCTGGATTTTGCACCAGAACCACCAGCACCGTCGGCGACTCCAGTTACGGAACATGTTGATATGTCCTGCCCGCCCAGCACTGATACTAGAGACTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCAGATCGCTCATCACATAATACATCGCTTGGACCAATCACCAATGCATCAGATGCAGCACCAGACAGACGACACCAACtcaaatttaatacaaaatatcAAAAGCGAGGTAGTCGAGGTAAAACATCATGTACAGCAACAAATTCAAGCCCAACAGGTTCAGACGCATCAGCAGCAATCCCATCAAGATATAACAGGCTCAACTGTTATGGAAATAGATCCTAACAATATCAAACACGAGCCGGGAATGATAATTACACCGGAAATTGTAACAATGATGACCACAGGACATATGGACATTTATAATTCCGACACTAGCGAAGACTCCCTTATGATTGCAAATGGTTCACCGAATGATAACAATGAGCCGCATTACACAAATCTAGATCAGCAGCACGATCTCAAGAACCAAGCTAATGGAGCGAAAACGTGGACACAGGAGGACATGAATTCAGCTTTAGACGCTTTAAAGAATCAAAATATGAGTCTGACAAAAGCTTCTGTCACATATGGTATACCATCCACCACATTATGGCAGCGTGCCCATCGGATGGGTATTGATACTCCGAAGAAGGAAGGTACAACAAAGTCTTGGAATGAAGAAGCTTTAAATAATGCACTGGAAGCATTACGAACTGGGCAAATATCAGCGAATAAGGCATCCAAAGCATATGGTATTCCGTCCTCAACATTGTACAAAATAGCTCGCCGCGAAGGTATACGGCTTGCTGCACCATTTAATGCGGCACCAACGACGTGGACACCTGAAGATCTCGAACGCGCCCTTGAAGCTATTCGTGCTGGTCATACTTCCGTCCAAAAAGCTAGCACTGAATTTGGTATACCTACTGGAACTTTATATGGTCGATGTAAAAGAGAAGGTATTGAACTTTCCCGATCTAATCCTACACCTTGGTCAGAAGATGCTATGAACGAGGCTTTGGTTGCAGTTAGGGTTGGTCATATGTCAATAAATCAAGCAGCAATCCATTATAATTTGCCGTATAGTTCATTATACGGAAGATTTAAGCGTGGGAAATATGACACGAGTGCAACAAGTACAAGTAACAACACTACCAACGCAAATACGAGCGCTAATCTTGAAATGATAGAGCACAGTCCAGAAAATTCGTTGCACATATTTCAGCAATTTCAATATAGCCCGGGTCCATCAAATAGCCAGGGTCACCATCAGccacaacagcagcagcaacagcaacaacagcaacagcagcagcaacagcaacaacaacagcagcaacagcaaaTACAACAGCAACCGCAGCACCAGCAGCAACAtcaacaacatcaacaacacCAACAGCATCAGCAACATCAACAGCATCAACAGCATACGCAACAACAGCACCacattcaacaacaacaacacactCACCTTCATCAACAGACGCAACATATTCAACAACAAGACGTAGTAACATCAACTAGCCAAGTACATACACAAGCTGgacaaattcaacaaatttaccACCATCATAGTACGCCGGAAAGGAGttga
- Protein Sequence
- MDENALGERISPETCVEVSQTIADGVGAHPLRQGRSNALGLLRTAEQLKIKGLCETAETVDDISTEAATTTTITVPESIAPPITNITNANTLTHTNNSQRKSRVRKRSKSPDQNQTIVATNQNFNTSAIVSLNPSSTITSGGTTVSGGSAITTTAITHFKSEHQQQVTSSNTDNVSEDIKPAKICKTEDSSNNGNGVVAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCPPSTDTRDLSNPTEALDIDNQIAHHIIHRLDQSPMHQMQHQTDDTNSNLIQNIKSEVVEVKHHVQQQIQAQQVQTHQQQSHQDITGSTVMEIDPNNIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQHDLKNQANGAKTWTQEDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEEALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTSATSTSNNTTNANTSANLEMIEHSPENSLHIFQQFQYSPGPSNSQGHHQPQQQQQQQQQQQQQQQQQQQQQQQIQQQPQHQQQHQQHQQHQQHQQHQQHQQHTQQQHHIQQQQHTHLHQQTQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431749;
- 90% Identity
- iTF_01431749;
- 80% Identity
- -