Basic Information

Gene Symbol
ct
Assembly
GCA_963855945.1
Location
OY979697.1:25648116-25651236[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5e-32 7.8e-28 98.0 0.0 3 77 335 410 333 412 0.96
2 3 8.4e-31 1.3e-26 94.1 0.0 3 76 536 610 534 613 0.96
3 3 1.9 2.9e+04 -3.1 0.0 2 19 839 856 838 858 0.82

Sequence Information

Coding Sequence
ATGCCACAATATGGTCGCCCCGATGATTCAATGTCTGAGGATCGCATCGCTCACATACTGTCTGAAGCATCAAATTTAATGAAAGCACCATCAAGCCAAGCAGTACATCATCACCAACAGCAGCAACACCAGCATCAGCAACAAATGCAGCAGCAAtcacagcaacagcaacaacagcaacaacaacaatctcACCAGCAAATGTCGAACAATCAAGAAGATGCACACAGCAACGAAGATTCAAAATCCCCGCATAATCAATGCCCGTCACCATTCTACAAAGAGGCGCTGCAAAGACGCTTCAAGGCCGACGAAATGTCACAAGATAAGGTGGCACGAATCTATCAAGAGGAATTGGCTAAACTGATGTCACGAGCACCAAGAGACGCCTTTCCCAGTTTTCTTTTTCCACATTTTTTTAGTGGTGGCATGCCACCAGCAGCAAATCAAATGCCAGACGAAAACATTCGCATGGCTTTAGAGGCCTATCATCGAGAACTTGCTAAACTGCAACAAACTGGTGGAACAATCCCGAACTTCCCAAATCTTCCAGGGCTATTGGCCTTGCAGCAGCAGGCATTAAACGGAGCTCAGGACTTATCCGTGCCAAAGGAGAAAGCAATGAAAATCAACGGACAACAAAATCCATCGTCTGCCGATTTATGTGATCAAAATACCAAAGAATCTTCAGCAAGTGAAGATGCTCTACGTCATTCGAGCGCATTTAGTCTGGTACGGCCAAAACAGGAGCCGGGAACACCAGTTAGTAACGCGAACAATAATCCAGCATCAACTGCACCCAGCCCTCTTGGTAATTCCATCCTTCCACCAGCTATGACACCTAATGATGATTTTTCAGCAGCTGCAAGTCCACTGCAAAGAATGGCATCAATCACCAATTCCTTGATTACACAGCCACCAGTAACGCCTCATCATTCCACTCCGCAACGGCCGATGAAGGCTGTTCTACCGCCAATTACTCAACAGCAATTCGATATGTTCAACAATCTCAATACTGAGGATATTGTCAGAAGAGTAAAGGAAGCTCTATCGCAGTATTCAATTAGCCAAAGGTTATTTGGTGAATCTGTTTTGGGCCTATCACAAGGATCTGTATCAGACCTACTAGCCCGACCAAAACCTTGGCATATGCTGACACAAAAAGGACGAGAGCCCTTCATTCGAATGAAGATGTTCCTCGAGGATGATAATGCTGTACACAAGCTTGTAGCAAGTCAGTATAAGATTGCACCAGAAAAATTAATGAGAACTGGAAACTATAGTGGAAGTCCGCAAATACCAGCTGGATTAAATAATAAACTCGTTCCAATGCAGAAGATGATGAACGATTTGAAAATGCAGGAACCACAACATATTATGCAAATGCAAGCGGCTGCCGCAATGAGTCATATTCCACCATCACAGCACCAACAAGGTATGTTGCTAACACCACCTGGCCTTCCTCCACATCATGCTATTAATTTACCAACAGCAAACGATAAGAAACCAATGATGATGCCTGTCCATTCGCCGCAACAGAATAATGCTATACGAGGCATGCATCAGCACATGTCACCGACCGTGTATGAAATGGCAGCCTTGACTCACGACCTTGATACTCAAGTGATCACAACGAAAATCAAGGAAGCTTTGTTGGCGAATAATATTGgccagaaaatttttggtgaaGCTGTGCTAGGATTATCTCAAGGATCAGTATCTGAATTATTGTCAAAGCCGAAACCCTGGCATATGCTGAGTATAAAAGGACGAGAACCATTTATCAGGATGCAGTTGTGGTTGTCTGATGCTAACAATGTCGAAAGGCTGCAGGCATTAAAAAATGAAAGGCGTGAAGCTAGCAAGAGGAGGCGATCGACTGGTCCAAATACACAAGATAATAGTTCAGACACTAGTAGCAACGATACAGCTGACTTTTATACAAGCAGTCCTGGTCCAGGCTCTGTGGGCTCAGCAGGAGCACCACCAAATAAGAAACAGCGTGTTTTATTCTCTGAGGAGCAGAAGGAGGCACTCCGATTAGCTTTTGCTCTTGATCCATATCCAAATGTAGCAACGATTGAATTTTTAGCCAACGAACTTGGCCTAGCCACTCGTACCATAACGAATTGGTTCCACAACCACCGAATGCGATTAAAGCAACAAGTTCCACATGGGACACCGAACGAACCAGTTCCGAGCCGAGAAAATCAAGCCGGAACACCTTTCGATCCTGTGCAATTCAGAATTCTACTTAACCAGAGACTGATGGAACTACAGAAAGAGAGAATGGGACTAAGTGGAGTTCCACTCCCATACCCACCGTATTTTGCCGCTAACCCTAATCTAGCAGCATTAATAGGCCGAGGTCTTCTACCTGGTGGAGAGCCAGACCTTGCAGCACTGAATAATGCGTTTAAGGAACAAATGAGCGGTCTTGATTTATCAATGAGCTCGCTTAAACGTGAACGAGATGAAGAATTTGAAGATGAGGCTGACAGTCATGCTTCAGATAATGAATCAATAGATGGTAGTGATGTTAAGCAAGAAATAAAAGAAGCATTAACATCAACACCATCTTCAGCTTCCCTACAATCAAGAATATCACGACGTAAACCTGCCGCACCACAATGGGTTAATCCAGAATGGCAGGATGATGTTAAAGGATCTGGGCCAGCTCCTGGTCCACTACCAGCTGGTACTGAACAAGAAGTTATCATTAATGGTGTTTGTGTAATGCAGCAACAAGCTGCTGATTATAGTCGAAAATCTGGTAATGAAGAAACCGTCCGTATTGAACCGACAGCGGTACAAGATCGATTCCATGATGATGCCGATGATGATGGCACATCAGATAATGAAGATGAACGTGGCGACACTGAATCGCAAGGATCAAATAAGAATAGTGATTGCGGTGATAATAATGAACATAATAACGATAATGAACATGAAAATGATATTATTGTTAAACAGGAAAGAGATTGCGAAAGTACTGGACGGGGCAGTGTACATGATACTGTTGAATCgaaagatgatgatgatgaaacgCCGGGAGTAtggaattattaa
Protein Sequence
MPQYGRPDDSMSEDRIAHILSEASNLMKAPSSQAVHHHQQQQHQHQQQMQQQSQQQQQQQQQQSHQQMSNNQEDAHSNEDSKSPHNQCPSPFYKEALQRRFKADEMSQDKVARIYQEELAKLMSRAPRDAFPSFLFPHFFSGGMPPAANQMPDENIRMALEAYHRELAKLQQTGGTIPNFPNLPGLLALQQQALNGAQDLSVPKEKAMKINGQQNPSSADLCDQNTKESSASEDALRHSSAFSLVRPKQEPGTPVSNANNNPASTAPSPLGNSILPPAMTPNDDFSAAASPLQRMASITNSLITQPPVTPHHSTPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGSPQIPAGLNNKLVPMQKMMNDLKMQEPQHIMQMQAAAAMSHIPPSQHQQGMLLTPPGLPPHHAINLPTANDKKPMMMPVHSPQQNNAIRGMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPNTQDNSSDTSSNDTADFYTSSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGTPNEPVPSRENQAGTPFDPVQFRILLNQRLMELQKERMGLSGVPLPYPPYFAANPNLAALIGRGLLPGGEPDLAALNNAFKEQMSGLDLSMSSLKRERDEEFEDEADSHASDNESIDGSDVKQEIKEALTSTPSSASLQSRISRRKPAAPQWVNPEWQDDVKGSGPAPGPLPAGTEQEVIINGVCVMQQQAADYSRKSGNEETVRIEPTAVQDRFHDDADDDGTSDNEDERGDTESQGSNKNSDCGDNNEHNNDNEHENDIIVKQERDCESTGRGSVHDTVESKDDDDETPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01431718;
90% Identity
iTF_01431718;
80% Identity
iTF_01430641;