Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963855945.1
Location
OY979699.1:17299292-17311944[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-26 6.1e-22 79.6 0.0 2 89 375 458 374 458 0.95
2 2 1.4 1.1e+04 -1.4 0.0 4 20 1197 1213 1195 1224 0.80

Sequence Information

Coding Sequence
atgacCCTTAGTCaatcaaaaacaacaaaaactgaaCATGTTTCACCACATACTTGTGTATTAACTAGAAATCAttgtaaaaaatcaaatacaattaataatattaataaaaataataatggacATGGTACAAACAGTATCAGTActtcagcaacaacaacagcagcagcaacatcagctacatcatcatcagcagcaacaacaaacagtacaaaaaaatcaaattgcGAATTATTACAAGATAATACACCATCATCAACTAGTGATATACTATCAATAACTAGAAATTTATGTGAATTAAATGATGATAATAGTAATATGTCTAGCACAacagaaaatattataaaagtaattaataataaaatacaatCAACAGAACAAATATTAGATAATTCTCCATTAAAGAAATTGCATCAGGCATCATCATCGGGACCTTCAGCAACTATAACAacaacatcatcatcaacatcatcatcgtcatcatcatcaatatGTGAAGATGGTATTAATTCAAATACATTAGATGTAACACAAAcagttaataatattgataatgATAAAAATACTACAATATCACCAAAAAAGTTTAATGTAACTTTAACTGGTGGTAATGtaactaataataataacaataataataacaacaataataataatcaacaaaataaatcaattaatggatctaacaataataataatgcagCTAGCTCAACTAGTAGCAATAATCATCATCATACACGTTGCGGTACAAATCCATTTTCAAATCATCAAAGAAATAATAGTAGCGGAGGCGGTAGCGGTAACGGCGGCGGTAGCGGTAACAATAATAATTCATCTGGTAGCCATCATTATttacatacaacaacaacattttCATTGGACAAAAATGAAGAATTCCATTTTGTTAAGCCACCGGAATGTCCAGTTTTTAAGCCAACTGAGGAGGAATTTAAGAATCCTTTAGCATATATCAGTAAAATACGACCAAATGCTGAGAAATATGGCATTTGCAAGATTGTACCACCAAATTCATGGACTCCACCATTCACAGTGGATGTGGACAAATTACGTTTTACACCAAGAGTACAGCGATTGAACGAGCTCGAAGCAAAAACAcgagtaaaattaaatttccttgaTCAAATAGCAAAATTTTGGGAGCTACAAGGATCATCACTTAAAATACCAATGGTTGAACGTAAGGCACTTGATCTCTATACATTACATAGACTGGTACAAGAAGAAGGCGGTATGGAACAAGCCACGAAAGATCGTAAATGGTCAAAGGTAGCACAAAGAATGGGCTATCCAGCTGGAAAAAGTGTTGGTACAATATTGAAGGGTCACTACGAAAGGATCCTGCATCCATTTGATATATTCACGTCTGGTAAAGTGAACGTTGATATTAAGCTAGAAACAGAAATCGATGATCAAGATTATAAGCCGCATGGTATTGTATCACGTCAGCAGATAACACCGCCAAATGAGACAACAGCAAGACGGTCAAAGCGATTTGCAAATAGCGGTGCAACATGTGGCCTTGGTACAGCTATTAAGGATGAAGTGAAAAAGGAAGAGAAGGATATCGATGATGAAAATCTCAGGGGTACAGAGTATCGCAGATTGCATTTTTATGGTCCTGGACCAAAAATGGCTGGCTACAGTGCCCGGAGCTGTCGTTCAAGAATGGCTAGCGGCGGTGTTGGTGCACAGCAAAAATTCTCAGCGCAAAAACTCGCTAAGGAAATTGATCCATTGGCTAAATATATATGCCATATTTGTAATCGCGGCGATGCTGAAGAGGCAATGCTACTATGTGATGGATGCGATGATAGCTATCATACATTCTGCTTAATACCACCATTAAACGACATCCCAAAGGGCGATTGGCGATGTCCAAAATGTGTTGTTGAAGAAGTTAGTAAACCACAAGAGGCTTTCGGGTTTGAGCAAGCATCTCGTGAATATACATTGCAGCAATTCGGTGAAATGGCTGATCAATTCAAGGCCGACTATTTTAATATGTCTGTACATCTGGTGCCCACCGATTTGGTAGAACGTGAATTTTGGCGTATTGTTTCGTCAATTGATGAAGATGTTACTGTTGAATATGGTGCTGATTTGCATACAATGGATCATGGTTCCGGGTTTCCAACGAAAAGTTCACTTTATTTACTACCTGGTGACCAAGAATACGCTGAATCTAGCTGGAATTTAAACAATTTACCATTGCTCGAAGAATCAATACTTGGCCATATAAATGCCGATATCAGTGGCATGAAAGTTCCATGGATGTATGTTGGTATGTGCTTTGCGACATTCTGTTGGCATAACGAGGATCACTGGAGCTATTCAATTAATTACTTACATTGGGGTGAGCCAAAAACATGGTATGGTGTACCTGGTAGTAGGGCGGAATCATTTGAAGAAACAATGAAGAGTGCTGCACCAGAACTATTTCAATCTCAACCAGATTTACTACATCAGCTAGTTACTATTATGAATCCAAATATATTAATGAATTCTGGTGTACCAGTTTATCGCACTGATCAACATGCTGGCGAATTTGTAATTACATTCCCAAGGGCTTATCATGCTGGCTTTAATCAGGGATACAATTTTGCTGAGGCTGTTAATTTTGCACCAGCCGATTGGATGAAGATGGGACGTGAATGCATCAATCACTACTCAACATTAAGACGATTCTGTGTATTTTCACATGATGAATTGGTTTGCAAAATGGCGCTTGATCCAGATAGGCTTAATTTAGGCATAGCAACAGCTTGTTACTTGGATATGGCTGAAATGGTCGATTCCgagaagaaattaagaaaatctcTGCTAGAATGGGGAGTAACTCAAGCAGAACGAGAACCATTTGAATTAATACCAGACGATGAACGACAATGTGAATCATGTAAAACGACATGCTTCCTATCCGCTGTTTCGTGTGCTTGTACACAAAATATAGTTTGCCTACGACACTATACAGAACTATGCGAATGTCCACCAGAAAAGCATACGCTTAAATATCGTTATACATTAGACGAGCTACCATTaatgttgaaaaaattaaaagtaaaagcGGAAAGCTTTGAAAATTGGTTATCAAAAGTTCGCAATGTATTAGATCCAAATACAACAACTACAATAACACTTGAGGAGCTGCAGGAGCTTGCGCAAGAGGCTGAAGATAAAAAATTTCCCAGTTCTGTTCTATTAGAACGTTTAAACTCAGCTGTATTAGAAGCTGAAAAATGCGTTACTGTTATACAGCAGcttgatataaataaaatgcgcACTAGAACACGCAATTCATCTGAATCAGCCAAGTATAAATTGACATTGGATGAGCTGGAATTGTTTGTCCAAGAAATTGATAATTTATGCTGTATTATACAAGAAGGACAGAGTGTTCGGGAATTACAAATACTCGGTCAGGAATTTGTTGATTCGGCAAAGGCGCAATTAGCTAAATCAATTAATAAAGCTGATGAGAAATGCATCGAGAAATTAATTGAAGACGGCAGCTCGCTGTGTATTGAATTGCATGAGATTAAAGCGCTTAAAGATCGTTTAATAcaagttaatttttataatcgtGTTAAAACATTTCACGATTCACAAGAAAAGAAGCCCGTTTCTGAGATACAAGCATTACTAAAGGAGGGCTTAAGTATTACACCTGATTACTATGTTGAGAAGCAACTTGTGTTTTTACAAGAAGTTATAATGGGCGTTGAAGATTGGGAATTGGTAGCTGCTAAATGTTTTGAAAGTGGTACACAACATGAGCTGCCAGAAATTGAGCTGTTGCTTGGACGAGCTgaagaaatacagggtgttcTACCAAGTCAGCCAGCATTGAAGGATGCTgttaaaaaggcaaaagaatGGCTATCAACAGTGGAAACACTTCAAGCAAATGAAAATTATCCATATTTTCATACATTAGAAAATGTTGTGAATCGTGGCAAAAATATACCATTTCAGCTAGAAGAATTGAAACGTATGGAAGAGCATTTAGAAAGTGCTAAATCATGGAAGGAACGCACATCACGGACATTCTTAAAGAAGCAAACATCATTTACGTTAATGGATGTATTATCGCCGCGTGCCGAAGCTGTTATGATTGCagctaaattaaaaaagaaaccatTAGAAGAACAATTTACAGAAGATATGGGCCCAGTACAAATGGTAAATGCATTTAAAAATGCCGAAGAGAAAGAATTAcgtgaaatgcgtgaattgcgTAAGGCAAATCTAGAAAAGAATCCATTAGAAGATAAATATTGTATATGTAAGCGAAAATTTAATGGAAATATGTATCAGTGTCAATTATGTAAGGATTGGTTCCATTATATTTGTATACCACCACCAAAAAATACAGTAAGACCCCGTCCATCAAATTCTGTATCACCAACTGGTGCACCATTAGTGCCACCATTAAATGTACGTGAAAAGGATCGcgaaacaaaatatttatgtcAATCATGTATGAGATCGCGTCGTCCGCGTCTTGAGACTATATTATCATTATTAGTATCATTGCAACGTTTACCAATACGTTTGCCAGAGGGTGAAGCATTACAGTGCCTAACTGAGCGTGCTATGAATTGGCAAGATCGTGCGAGACAAGCTTTTGCCACTGAAGATGTTGCATCGGCCTTAGCTGCATTATCAATAATATCGCAGAAAATGAATGAGGGTCAAACACGCCAGGATAAGCCGACATCAAATTCAAACAGgaaaatcaaaacaacaacTAGAAAACGACGACCACAAGTAAGAACTTCGGATGAGGAAGATGTAACATCATCTGAAGAAGAAACATTCGAGCCGATACGTGACGATGTTCCTTCGGATACAGAAAATTCACCGTCATCTCCAACtaaAATTGAGCATGCATATTCGGTGCCACCACCAAGTGCATCAGCATCTCTATCCCCTACCTTTAGTAAAATGACAAGTGGCCTTAGCAGCCCTCTTCATAAGTCTGACATGCCGCTAATACAATTAAATAAGGAAGTTAAAGAAACGCTGGAAGACTTAATGATGGAAGGGGATCTCCTAGAAGTTTCATTGGATGAAACACTACATTTATGGCGTATATTAAATGCAGCAAAACCATCAATATCAGACTTAGCATATATACAATATCGTTATAACTTAGTGCCCACATCCAATTCACTTCTAGTCAACAGCATTAAAAAGCGAAAATTTGATGAGAATGCTGGACCACAATCTACAAAACGAGTGGCGAAAGgaTCAGCTACAAGTACAACAACGAGTGCAGAGAAGAATGTTCAAAATAAAGTTAAGCGTGGTAGAAAAGTTAAGGTAACAACAAAAGATGCTGAAAGTACAATTGCAAGTGGCAATGACGCTAAGAAGAGGAAGCGTGGCAAGAAGGCACAGCAGGAGCAGTTAACGGTTGTTGCAGCATCAAcgtctgatgatgatgaagaatgTAGTGCATCTAATTGTGCTAAACCATCAGgtCGTGAAGTTGATTGGGTACAATGTGATGGCGGCTGTAATCAATGGTTTCATATGTATTGTGTTGGTCTAGATAAGCATCAAATAAAGCCAGACGATGATTATATatgtaaaagttgtaaaaaatcatcaaatagtggtggtggtggtggtaaaAATTCCTCAgtaacatcatcatcatctgaatCACCGCAATCAGAAACACAACATAGAGGTAAGTCCCCACGTTGTCATGAAGGTGtttcatcaacaacaacaacaactactaCTGCTGGTGCTGCTACAACAATATCTTCAACAACATCAGCAATAACACAACAATCAACAACAGTACCATCATCATCGATTAATAATAGTTGTAGTACAACAGCGtcagcagcaacaacagcaacaacaacaacaacagtagCATCACCATCATTATCGTCAACATCAACtacattatcatcatcatcgtcgCCAGCAACAAATGCATCTGCTACATCAATAACAGCAGCTACAACGGCACCTTcttctattaataataatattaaaaataataaaaattcaacgtCTTCAGTTACACTAAAAACCTAG
Protein Sequence
MTLSQSKTTKTEHVSPHTCVLTRNHCKKSNTINNINKNNNGHGTNSISTSATTTAAATSATSSSAATTNSTKKSNCELLQDNTPSSTSDILSITRNLCELNDDNSNMSSTTENIIKVINNKIQSTEQILDNSPLKKLHQASSSGPSATITTTSSSTSSSSSSSICEDGINSNTLDVTQTVNNIDNDKNTTISPKKFNVTLTGGNVTNNNNNNNNNNNNNQQNKSINGSNNNNNAASSTSSNNHHHTRCGTNPFSNHQRNNSSGGGSGNGGGSGNNNNSSGSHHYLHTTTTFSLDKNEEFHFVKPPECPVFKPTEEEFKNPLAYISKIRPNAEKYGICKIVPPNSWTPPFTVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRLVQEEGGMEQATKDRKWSKVAQRMGYPAGKSVGTILKGHYERILHPFDIFTSGKVNVDIKLETEIDDQDYKPHGIVSRQQITPPNETTARRSKRFANSGATCGLGTAIKDEVKKEEKDIDDENLRGTEYRRLHFYGPGPKMAGYSARSCRSRMASGGVGAQQKFSAQKLAKEIDPLAKYICHICNRGDAEEAMLLCDGCDDSYHTFCLIPPLNDIPKGDWRCPKCVVEEVSKPQEAFGFEQASREYTLQQFGEMADQFKADYFNMSVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAESFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNSGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECINHYSTLRRFCVFSHDELVCKMALDPDRLNLGIATACYLDMAEMVDSEKKLRKSLLEWGVTQAEREPFELIPDDERQCESCKTTCFLSAVSCACTQNIVCLRHYTELCECPPEKHTLKYRYTLDELPLMLKKLKVKAESFENWLSKVRNVLDPNTTTTITLEELQELAQEAEDKKFPSSVLLERLNSAVLEAEKCVTVIQQLDINKMRTRTRNSSESAKYKLTLDELELFVQEIDNLCCIIQEGQSVRELQILGQEFVDSAKAQLAKSINKADEKCIEKLIEDGSSLCIELHEIKALKDRLIQVNFYNRVKTFHDSQEKKPVSEIQALLKEGLSITPDYYVEKQLVFLQEVIMGVEDWELVAAKCFESGTQHELPEIELLLGRAEEIQGVLPSQPALKDAVKKAKEWLSTVETLQANENYPYFHTLENVVNRGKNIPFQLEELKRMEEHLESAKSWKERTSRTFLKKQTSFTLMDVLSPRAEAVMIAAKLKKKPLEEQFTEDMGPVQMVNAFKNAEEKELREMRELRKANLEKNPLEDKYCICKRKFNGNMYQCQLCKDWFHYICIPPPKNTVRPRPSNSVSPTGAPLVPPLNVREKDRETKYLCQSCMRSRRPRLETILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRARQAFATEDVASALAALSIISQKMNEGQTRQDKPTSNSNRKIKTTTRKRRPQVRTSDEEDVTSSEEETFEPIRDDVPSDTENSPSSPTKIEHAYSVPPPSASASLSPTFSKMTSGLSSPLHKSDMPLIQLNKEVKETLEDLMMEGDLLEVSLDETLHLWRILNAAKPSISDLAYIQYRYNLVPTSNSLLVNSIKKRKFDENAGPQSTKRVAKGSATSTTTSAEKNVQNKVKRGRKVKVTTKDAESTIASGNDAKKRKRGKKAQQEQLTVVAASTSDDDEECSASNCAKPSGREVDWVQCDGGCNQWFHMYCVGLDKHQIKPDDDYICKSCKKSSNSGGGGGKNSSVTSSSSESPQSETQHRGKSPRCHEGVSSTTTTTTTAGAATTISSTTSAITQQSTTVPSSSINNSCSTTASAATTATTTTTVASPSLSSTSTTLSSSSSPATNASATSITAATTAPSSINNNIKNNKNSTSSVTLKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01431626;
90% Identity
iTF_01431626;
80% Identity
-