Tjap014328.1
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_033459515.1
- Location
- CM065946.1:763459-765936[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.01 1.2e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 20 3.1e-07 0.0034 17.6 15.9 3 19 186 202 185 202 0.95 4 20 5.6e-08 0.00062 20.0 15.2 3 19 239 255 237 255 0.92 5 20 0.86 9.5e+03 -2.9 1.2 5 10 279 284 279 284 0.83 6 20 2.3e-09 2.6e-05 24.4 11.3 1 19 290 308 290 308 0.98 7 20 1.2e-06 0.013 15.8 18.3 3 19 345 361 344 361 0.93 8 20 0.2 2.2e+03 -0.9 0.8 1 5 370 374 370 379 0.79 9 20 2 2.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 20 1.2e-06 0.013 15.8 16.0 1 18 395 412 395 413 0.97 11 20 8.1e-09 8.9e-05 22.7 16.9 1 19 422 440 422 440 0.99 12 20 0.025 2.8e+02 2.0 5.2 9 19 488 498 486 498 0.88 13 20 0.0021 23 5.4 8.6 1 12 508 518 508 518 0.96 14 20 0.31 3.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 20 0.3 3.3e+03 -1.5 0.3 7 11 567 571 567 572 0.87 16 20 3e-06 0.034 14.5 4.1 1 11 588 598 588 599 0.97 17 20 0.75 8.3e+03 -2.8 1.6 15 18 613 616 612 617 0.83 18 20 0.00037 4.1 7.8 15.0 3 18 629 645 628 646 0.85 19 20 2 2.2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 20 2.4e-06 0.027 14.8 12.9 1 16 687 701 687 706 0.90
Sequence Information
- Coding Sequence
- ATGGCGAGAAGATATAGAGATGCCGCCGCAAAATTGCAGCAAAACGTGCAAAAACACTTGCAGGAAATGAAAGAATTGTCTTCTTCTGAAGACGACGAGCCTTTTGAATCGAGCTTATTGGAAGGAGTTTTGCAGAGGTACTGCACCGGTGGAGGAGACTCCCATATGCTAAACAGAACTAAGAATGTTCTAGAAGAAGCCATCAGCGGCCGGTCTATAACTTGTCTCATTTGTATAGGTTCTATCAAAAGAGCCGATGCTATATGGAGTTGCGGACACTGTTACTGCCATTTCCACCTGTCCTGCATCCAGAAATGGTCGAACGACAGCATCAGCCTCCGGACTGAGGCGCCCCAAGCCCCTGTGTCAGTATATGTCGCGAAAAAAGTGGAATGGTGTTGTCCGAAATGCCGGCATTCGTATTCCAAAGAAGAAATCCCGCGTAAATACAGATGTTTTTGTGAGAAAACTGATGACCCACCGTACCATCCATGGTTGCTGCCTCATACTTGTGGTGAAGTGTGTGGTAAGAGATTATCTGCTGGTGAAAGTTGCAAGCATAAGTGCTTATTGCTATGCCACCCTGGACCATGCCCACCCTGTCCTCAAACCGTTAATGGTGCTTGTTATTGTGATAAAGAACGTAAAAAGGTCCGATGTAGTGCTGCTAAGTGGTCATGTGGTAATTCTTGTAAGAAGTTGTTACTTTGTCGTACACATAAATGTGAGAAAAAGTGTCATGAAGGGGAATGCCCTCCGTGCAGCTATACCAGTGTGCAGCCATGCCAATGTGGCAGTGAAAAGGGAAAACGCCCATGCAATGATCCAATTTGGAATTGTAAAAAACCATGCAACAAAAAGTTTGCCTGCGGGTTTCATAAATGTGAGAAAATCTGCCACTCTGGTGACTGTGGCGATTGCCCTAACTCTGGCATGAAGTCTTGTCCATGCGGGGCTAATAAGAGATATGTACAGTGCCCAGATGTTATGGAGACATGCGTAGGAACTTGCAGTAAAATGCATGAGGACTGTGAACATAACTGCCCTGAGAAGTGCCACAAGGGCCCTTGCCCACCCTGCCAAGTACTAATCCAAAAAAAATGCCAATGTGGTACACATACCAGATCTCTGCCATGCAGTAAAGAGTTTAAATGTGAAACTAAATGCCGAGGCACAAGGCCTTGTGGCAAGCACAGCTGTGCCCGCAAATGTTGCAATGGTAACTGCCCAACTTGTGAAAAAATCTGTGACAAACCTCTTCATTGTGGTCGACATAAATGTACCAACATCTGCCATCATGGTCCATGCTATCCCTGTCCTAGGGAATCTAAAATTACCTGCCGGTGTAAAGAGACATACATCACTGTACCTTGTGGCAGAGAAAAGTTTGTGAAACCACCAAAATGTTCTTTACCCTGCAAGATTAAATACAAATGTGGGCATtcagaacaaaacaaacattcttGTCATTTTAATGACTGTCCTCCTTGCAAAGCCATTTGTTACAAGACATATCCAAAATGTGGACATGAATGCAAAGCCACTTGCCATGAATATGTTGCTGTTGTTTTCAAGCAGATAGAAAAGCCAGCTACACCATGGGAAGTGCAGCCACCAAAGACTAAAATCATGACTTTAGACTGCCCCCCGTGTGAGACACCAGTATCAGTAATATGTTTGGGAGAACATGAGACTGAAGAACAACTATGTCATTTAGCAACTAGAAGATCCTGTGGGAGGCAATGCGGCCGCCCTTTGCAATGTGGCAACCATACATGTGCTTTATTGTGTCATCTTATTACTCACAGTGAAAAGACTCCGAATGCTTCACTTAGTTGTAAACCATGTGACAAAGAATGTTTGGTGCCCCGTCCCGAAAAGTGCATTCACAAATGCCCTAAACGGGGCTGCCATCCAGGAGCCTGCCCTCCTTGTGATTTATTAGAAAGGATACCTTGCCACTGTGGTGTTACAGAGCTATATCTTCGATGTCGAGAACTGTCAACTGCCACAGAACAGATGCTGTCTTGTAAGCAACAGTGCCCAAAAAATTTGGAATGTGGGCATCGATGTCGTAATACCTGCCACTCCGGTCCATGTGGCAATCAGATCTGCACCCGAAAGACTAAAATCCACTGCCCATGCTTAAACTTAAAGAAAGAAGCTCCGTGTAATCTGGTTAAAAATGGAGAAGCAAAAATAGCTTGTGACAAGTCTTGTGAAGAGAAGAAGATTGCATTAAGGcaagaaagagaaagagaggaACGTAGGCAGAAAGAGTTAGAAGAAGAGAGGAACCGAAAAGAGCTAGCTGAATATGAATGGAAATTGAGTGGCAAAAAGAAGAAATACAAGGAAAGGAAAGTTACAGTTGACAAGGATGATAGGAATTTGTTGCAACGTTACTGGATGCCTGTTGTTTCTATATTAAGTGTAGTTATTGCAGCtgtgtattacatattttatgtggaaatgtaa
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKELSSSEDDEPFESSLLEGVLQRYCTGGGDSHMLNRTKNVLEEAISGRSITCLICIGSIKRADAIWSCGHCYCHFHLSCIQKWSNDSISLRTEAPQAPVSVYVAKKVEWCCPKCRHSYSKEEIPRKYRCFCEKTDDPPYHPWLLPHTCGEVCGKRLSAGESCKHKCLLLCHPGPCPPCPQTVNGACYCDKERKKVRCSAAKWSCGNSCKKLLLCRTHKCEKKCHEGECPPCSYTSVQPCQCGSEKGKRPCNDPIWNCKKPCNKKFACGFHKCEKICHSGDCGDCPNSGMKSCPCGANKRYVQCPDVMETCVGTCSKMHEDCEHNCPEKCHKGPCPPCQVLIQKKCQCGTHTRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGNCPTCEKICDKPLHCGRHKCTNICHHGPCYPCPRESKITCRCKETYITVPCGREKFVKPPKCSLPCKIKYKCGHSEQNKHSCHFNDCPPCKAICYKTYPKCGHECKATCHEYVAVVFKQIEKPATPWEVQPPKTKIMTLDCPPCETPVSVICLGEHETEEQLCHLATRRSCGRQCGRPLQCGNHTCALLCHLITHSEKTPNASLSCKPCDKECLVPRPEKCIHKCPKRGCHPGACPPCDLLERIPCHCGVTELYLRCRELSTATEQMLSCKQQCPKNLECGHRCRNTCHSGPCGNQICTRKTKIHCPCLNLKKEAPCNLVKNGEAKIACDKSCEEKKIALRQEREREERRQKELEEERNRKELAEYEWKLSGKKKKYKERKVTVDKDDRNLLQRYWMPVVSILSVVIAAVYYIFYVEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820620;
- 90% Identity
- iTF_00820620;
- 80% Identity
- -