Basic Information

Insect: Theretra japonica
Gene Symbol: RREB1
Assembly: GCA_033459515.1
Location: CM065946.1:4816714-4821225[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.8 1.2e+02 3.8 0.2 1 22 132 153 132 153 0.88

2 11 0.021 1.3 9.9 0.1 1 23 279 301 279 301 0.97

3 11 0.0011 0.071 13.9 0.4 1 23 310 332 310 332 0.99

4 11 0.00069 0.044 14.5 2.0 1 23 338 361 338 361 0.97

5 11 0.0028 0.18 12.6 1.7 1 23 704 727 704 727 0.96

6 11 0.00023 0.015 16.0 1.3 2 23 923 944 922 944 0.97

7 11 0.024 1.5 9.7 5.3 1 23 950 973 950 973 0.97

8 11 0.077 4.9 8.1 1.8 1 23 1006 1030 1006 1030 0.93

9 11 0.5 32 5.5 0.1 1 20 1054 1073 1054 1077 0.83

10 11 0.0017 0.11 13.3 0.2 2 23 1117 1138 1116 1138 0.96

11 11 0.016 1 10.3 5.0 1 23 1144 1166 1144 1166 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.8	1.2e+02	3.8	0.2	1	22	132	153	132	153	0.88
2	11	0.021	1.3	9.9	0.1	1	23	279	301	279	301	0.97
3	11	0.0011	0.071	13.9	0.4	1	23	310	332	310	332	0.99
4	11	0.00069	0.044	14.5	2.0	1	23	338	361	338	361	0.97
5	11	0.0028	0.18	12.6	1.7	1	23	704	727	704	727	0.96
6	11	0.00023	0.015	16.0	1.3	2	23	923	944	922	944	0.97
7	11	0.024	1.5	9.7	5.3	1	23	950	973	950	973	0.97
8	11	0.077	4.9	8.1	1.8	1	23	1006	1030	1006	1030	0.93
9	11	0.5	32	5.5	0.1	1	20	1054	1073	1054	1077	0.83
10	11	0.0017	0.11	13.3	0.2	2	23	1117	1138	1116	1138	0.96
11	11	0.016	1	10.3	5.0	1	23	1144	1166	1144	1166	0.97

Sequence Information

Coding Sequence: ATGTACTCTTTTGTTACAGAAATCAAAACAGAGGACATCAGCGAGGCGAAAATTGAAGCCGAGGAAatggaaaaaatgaaaatagaacCGCAGGAGCTGCCCGTGCGGACGACCAGTATCGACAGCGACAACAGGTCGGATAGGAGTGACGAGGAGGATAGGAGGGCGCGCAAGAGGGCGGCGTCATCCTCCCCATCCCAGTTCCCCATGGACAAAAGGATCGCGCGATTGGAGTGCCTCAAGTGCAGACAGCGGTTCGACTCGCACAACGCGTACAACATCCATTGCTTCACGGCACACGGCGACGACAGGTCGGGCTATGACGACTACAACTACTCTGGCAAACGCGTCCCCGAGATCATGAGGAACTCCCAAATGCTACCGGAACAACGCTTTCGCTGCGACTCGTGCTCCAGGGAATTCCCGAGCGTCACAGCAATGGACATTCACAAGAAGACTTGCACGGTGCGAGTAGCAAGCCCTGAACGCATCAGGAGGGAGGATTTCTTCCAAAAATTAGATCTTACTAACAGGAACTTTTCAATTCCTGGCACGCTTACCCCACCGATGGAGCGATTTGCGCCTAAGTTCGAAGATGGACATCTGGCCACAAATGGCATGCGCCATATGGACCCCGCGCGGGATTTGGCAGATATCCAATCCATACTGAATGTGACTTCAGCGGGCAGCCTTCTGGAAAGATTGACGGGCACTAGAGTACCTTTGGAAAGTACTGTGTTGACACCGCCCGACACTATTGGCAAAGAGAGAGAGCCGGAAGAAACGCAAGACAATTTTGCAGCGGAATTCAGAAGGATGAAGTTACGAGGTGAATTCCCTTGCAGATTGTGTCCGGCGAAGTTCCCCAATCTCAGAGCTTTGAAGGGACACAACAGAGTGCATCTCAGCGGGACTGGGCCTGGTCCGTACCAATGCAACATGTGCCCCCACGCCTCTCTGGACAAGGCGGCGCTTGTGAGACACATGCGCACCCATAATGGCGACCGTCCTTACGAATGCGCTGTTTGCAATTATGCATTCACTACAAAAGCTAACTGCGAAAGACATTTGAGAAACCGCCACGCTAAAGTAACGCGTGAGGATGTGAAGCGCTCGATAATATACCACCCGTCAGAAGACCCTAACAACGACGAGGTCAATTCCAAGCTCGCTCGAGATGACGTAAAGAGGTCGTTGGCTTTCCACACCCCTGACGTCGATAGAAGGAATGATACGGGGCGCAACACACCCCTCACTCACTTCACGCCAAGTTTCATTACTGAGAGGCATCCAGTAGCATCTCTCGTAACTAAACCAATCGTTCCTGAAGCCCCAATAACTACTCGAGAACCAGAACAGCCTATTCCAAGAATAAAAGTGAAAGGCATAGGGCAGCTGACGCAAATACCGGAGTTCAGACCGCCGGAGGTGACATACAAACCCAACGACGTTCAAACCGACACTTACGATGAAGAAGCTCCAGTGGATCTGAGTACGAGTGATAACAACAGTTGCGATGTATTAGATTTAAGTAAAAAGAAACGTGACGCTGAAGAAGAGCCTAAAGCTCCACCGCGTCCCTCTTTCGAACCGGACGCGGCAGCGGCTGCAGTATCAGCGTTCGAGAAGACAAGCCTCTTGTTAGCTCAACAAAGATTATTTGAATCTTCCTTCCCCAAAATAGATCCTGCTTACTACGCCACGCATCTTTCTCAACTTTACGCGGGTACCGTCTCCGGTCTCCCGGGCCTTCCGATTACGCCGTCCTTTCCGTACTTTCTTCAACCCCCGTTTTTTCCTAATCCATCCGATTCACAAGAACTTGCTGAAATAAAGCAACGCATCCATAAAGAAATCATTCGCAGCTTAAGCATGTCTGGTGGGAGGCTAGTTCCTAACGAACAGGAAGCTCAGCCAAAGCAGGAGTCAGAAGAAGAAGAAGCGAAGCCTGTGCCACAGTCAATTTCACCCGCACTCTCCCCGCATACTGAATCTCCGCGGCCATTGAGCAACAATCTCGTACCCCAGACGGATTCCGTGAAAATGGTGATAAAAAACGGCATACTCATGCCTAAACAAAAGCAACGGCGCTACCGTACCGAAAGACCATTCTCTTGCTCTCAGTGCACTGCCAGATTCACTCTTCGCTCAAATATGGAACGCCATGTGAAACAACAGCATCCTCAGCATTGGAGTGTGAGGAGACCAGCACCTAGGGCCCCACCACCGTACCCTACTCCGGATACATTAGCTGATCGTGTCAAATTCGCTCTCTTGGCCCGTCATCTTGAACGTCCACTACAGCAACCAGAACGTTCGCCAGTCCGTCGTGATTCGGACGAAGTTGCTGACAACGAAGAGGATGAAGACGACACTCTTGTTATTGACGAAGAACCGGAGCAAGACTTGAAGCCTGAAGGGTACACAGAGGCTCATAGAGAAGCTGCAAAGATATTAATGGCGACTTGCCAACAAGAAATGAACAAAGATTTTGACCTTAAAATTGCTGGGAATTTGATTAACAAACCTATCCCAATTCCAACGGATAAGACTGAGGCAGGAAATGATGCTGCATCAACAGCTGGACAAGATTCGCTACCGGTGCCTGTGGTACCGGCGCGCAGTGATGAAGAAGAAGATGAAGAGGGTCTAGTGGCCTCCACTAGCGAAGGGAATAACTCCGGAAGCGATGAAAATAAATCAGAATCAGACACTACACAGCCACCGAAGAAGAAGTCTGCCTACAGCCTCGCACCAAACCGCGTGTCGTGCCCTTATTGTCACCGCAAATTCCCGTGGTCGTCGTCGCTCCGTCGCCACGTTCTTACCCACACCGGGCAGAAGCCGTTCAAGTGCCCGCACTGCCCCTTGCTCTTCACCACCAAATCCAACTGCGACCGTCATTTACTGAGAAAACATGGGGGTTCCGCGAGGGCTATACTAGCTGAGCCAATTCCTGACGCGATCTCGCCACCTCAACCCACAAATGATATTCGCACGGTCCCAGAAAGGCCGTACAAATGCTCCTCATGTCCAACTAGCACATTCTCCTCCATGGAGACGTTGAAGAAGCACATGTCTTCGCGCCACGGCACCGACTCGCAGCCAGGGTCTCCCAACCCTGAGTTCGCTGATGATAACCCGGACTGCAGTCTGGTATTTAAGTGCCATTTGTGTGAAGCCTCGTTTGGGGACAGAACCGACGCGCTGGGACATTTGGGTGCAGTGCATACTACGGAATATGAACAGCTGGTGAATAAAGGCGCTTTGGACGCAGCGAGTGATCGTAGCGAgagtgctgatgatgatgaaagggGCAAGTTCCCTGATCACGCTAACAGAAAGGTGGTATGCGCATTCTGCGTGCGTCGCTTCTGGTCGGCGGAGGATCTGCGCCGGCACATGCGCACGCACTCCGGCGAGCGACCCTTCGCGTGCGACCTGTGCACGCGCCGCTTCACGCTCAAGCACAGCATGCTGCGCCACCGCAAGAAGCACCGCGAGGAACTCACCGACGATGAGGACCAGACCCCGCCGCACACGCCGGCTGACGGACATGTTGCTAATGGCTACCGCTATCAAGACGACGACGGCTCCGGCAACGAGATCCCGAGCAACGTGAACAACAACAACTCGCCTCCCTCGGGACCCTACGAGAAGAAACTCAAGCTGGACATGACGTCGCGCAAATACTCCTCGGAAGCCGACAACGATGCAGAAAACGGCACCGACCTCATCGGGAAACTGCTCGGAATCCCCGACAAGACCATCAACAAGCTGCTCTCTTCCGCCGACGAGGCCGCCAAAATTCTCGGCGTGAACAAATGA
Protein Sequence: MYSFVTEIKTEDISEAKIEAEEMEKMKIEPQELPVRTTSIDSDNRSDRSDEEDRRARKRAASSSPSQFPMDKRIARLECLKCRQRFDSHNAYNIHCFTAHGDDRSGYDDYNYSGKRVPEIMRNSQMLPEQRFRCDSCSREFPSVTAMDIHKKTCTVRVASPERIRREDFFQKLDLTNRNFSIPGTLTPPMERFAPKFEDGHLATNGMRHMDPARDLADIQSILNVTSAGSLLERLTGTRVPLESTVLTPPDTIGKEREPEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFHTPDVDRRNDTGRNTPLTHFTPSFITERHPVASLVTKPIVPEAPITTREPEQPIPRIKVKGIGQLTQIPEFRPPEVTYKPNDVQTDTYDEEAPVDLSTSDNNSCDVLDLSKKKRDAEEEPKAPPRPSFEPDAAAAAVSAFEKTSLLLAQQRLFESSFPKIDPAYYATHLSQLYAGTVSGLPGLPITPSFPYFLQPPFFPNPSDSQELAEIKQRIHKEIIRSLSMSGGRLVPNEQEAQPKQESEEEEAKPVPQSISPALSPHTESPRPLSNNLVPQTDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCTARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTPDTLADRVKFALLARHLERPLQQPERSPVRRDSDEVADNEEDEDDTLVIDEEPEQDLKPEGYTEAHREAAKILMATCQQEMNKDFDLKIAGNLINKPIPIPTDKTEAGNDAASTAGQDSLPVPVVPARSDEEEDEEGLVASTSEGNNSGSDENKSESDTTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDAISPPQPTNDIRTVPERPYKCSSCPTSTFSSMETLKKHMSSRHGTDSQPGSPNPEFADDNPDCSLVFKCHLCEASFGDRTDALGHLGAVHTTEYEQLVNKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCTRRFTLKHSMLRHRKKHREELTDDEDQTPPHTPADGHVANGYRYQDDDGSGNEIPSNVNNNNSPPSGPYEKKLKLDMTSRKYSSEADNDAENGTDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01490512;
90% Identity: iTF_00291015;
80% Identity: -