Basic Information

Insect: Theretra japonica
Gene Symbol: -
Assembly: GCA_033459515.1
Location: CM065941.1:13718797-13727733[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00055 0.035 14.8 2.6 1 23 188 210 188 210 0.99

2 28 0.0096 0.62 10.9 0.6 1 23 300 322 300 322 0.98

3 28 0.00056 0.036 14.8 0.9 2 21 347 366 346 367 0.94

4 28 5.7e-05 0.0037 17.9 0.2 2 23 398 420 397 420 0.96

5 28 0.0049 0.32 11.8 0.4 2 23 508 529 507 529 0.95

6 28 0.0056 0.36 11.7 0.7 2 21 553 572 552 573 0.93

7 28 0.0029 0.19 12.6 3.4 2 23 612 634 612 634 0.97

8 28 0.0052 0.34 11.8 0.5 3 20 680 697 678 699 0.92

9 28 0.028 1.8 9.5 2.7 2 23 733 755 733 755 0.97

10 28 0.00019 0.012 16.3 0.2 1 23 805 828 805 828 0.97

11 28 3.1 2e+02 3.0 2.5 1 20 886 905 886 908 0.88

12 28 0.00019 0.012 16.3 3.3 1 23 919 941 919 941 0.99

13 28 0.57 36 5.4 0.2 2 23 953 974 952 974 0.94

14 28 0.0099 0.64 10.9 0.5 1 23 984 1006 984 1006 0.97

15 28 0.0057 0.37 11.6 1.8 1 23 1032 1054 1032 1054 0.96

16 28 0.00031 0.02 15.6 3.1 1 23 1065 1087 1065 1087 0.98

17 28 0.00035 0.022 15.5 4.2 1 23 1095 1117 1095 1117 0.99

18 28 0.0017 0.11 13.3 0.3 2 23 1137 1159 1136 1159 0.97

19 28 0.2 13 6.8 3.6 1 23 1206 1228 1206 1228 0.98

20 28 0.0058 0.38 11.6 0.7 2 23 1239 1261 1238 1261 0.95

21 28 0.0074 0.47 11.3 0.2 2 23 1284 1305 1283 1305 0.95

22 28 0.65 41 5.2 0.7 2 20 1309 1327 1308 1329 0.92

23 28 0.0027 0.18 12.6 0.2 2 23 1386 1407 1385 1407 0.95

24 28 0.008 0.52 11.2 2.2 3 23 1415 1435 1413 1435 0.96

25 28 0.01 0.64 10.9 1.5 2 23 1446 1468 1445 1468 0.95

26 28 0.9 58 4.7 4.3 2 23 1485 1503 1485 1503 0.90

27 28 2.1 1.4e+02 3.5 1.1 2 23 1576 1597 1575 1597 0.95

28 28 0.00079 0.051 14.4 0.5 2 23 1608 1630 1607 1630 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00055	0.035	14.8	2.6	1	23	188	210	188	210	0.99
2	28	0.0096	0.62	10.9	0.6	1	23	300	322	300	322	0.98
3	28	0.00056	0.036	14.8	0.9	2	21	347	366	346	367	0.94
4	28	5.7e-05	0.0037	17.9	0.2	2	23	398	420	397	420	0.96
5	28	0.0049	0.32	11.8	0.4	2	23	508	529	507	529	0.95
6	28	0.0056	0.36	11.7	0.7	2	21	553	572	552	573	0.93
7	28	0.0029	0.19	12.6	3.4	2	23	612	634	612	634	0.97
8	28	0.0052	0.34	11.8	0.5	3	20	680	697	678	699	0.92
9	28	0.028	1.8	9.5	2.7	2	23	733	755	733	755	0.97
10	28	0.00019	0.012	16.3	0.2	1	23	805	828	805	828	0.97
11	28	3.1	2e+02	3.0	2.5	1	20	886	905	886	908	0.88
12	28	0.00019	0.012	16.3	3.3	1	23	919	941	919	941	0.99
13	28	0.57	36	5.4	0.2	2	23	953	974	952	974	0.94
14	28	0.0099	0.64	10.9	0.5	1	23	984	1006	984	1006	0.97
15	28	0.0057	0.37	11.6	1.8	1	23	1032	1054	1032	1054	0.96
16	28	0.00031	0.02	15.6	3.1	1	23	1065	1087	1065	1087	0.98
17	28	0.00035	0.022	15.5	4.2	1	23	1095	1117	1095	1117	0.99
18	28	0.0017	0.11	13.3	0.3	2	23	1137	1159	1136	1159	0.97
19	28	0.2	13	6.8	3.6	1	23	1206	1228	1206	1228	0.98
20	28	0.0058	0.38	11.6	0.7	2	23	1239	1261	1238	1261	0.95
21	28	0.0074	0.47	11.3	0.2	2	23	1284	1305	1283	1305	0.95
22	28	0.65	41	5.2	0.7	2	20	1309	1327	1308	1329	0.92
23	28	0.0027	0.18	12.6	0.2	2	23	1386	1407	1385	1407	0.95
24	28	0.008	0.52	11.2	2.2	3	23	1415	1435	1413	1435	0.96
25	28	0.01	0.64	10.9	1.5	2	23	1446	1468	1445	1468	0.95
26	28	0.9	58	4.7	4.3	2	23	1485	1503	1485	1503	0.90
27	28	2.1	1.4e+02	3.5	1.1	2	23	1576	1597	1575	1597	0.95
28	28	0.00079	0.051	14.4	0.5	2	23	1608	1630	1607	1630	0.97

Sequence Information

Coding Sequence: ATGGCCCTTGAACTCGGGAAATGCAGATTATGCCTCAAATTGGGAGATTTCTACTCCATATTCACAGTAGACAATGGGGTCCCGCTGTCGGAGATGGTTATGGAATGTTCGCGGGTGAAAaTATATGAAGGTGATGGTCTGCCAGATAAAGTGTGTTCAGAATGCATTCAAAAACTCAGTGGCGCATACATcttcaaacagcagtgtgagaGAGCGGATCAGGATTTGCGACGCAACTATGTACCGCCTCCAGGTTTCTGCCCGCTGTCGCCAAACAGACAGAGCAGCGACTCTGCTTTTTCCACCCACACAGATTATTCCAACTTGAATAAATCTACAGAAGGCAAAGTAACCCCTGCCAGCTCTGCTAGAAAGAGACGAACCGAGAGCGATGACACTTCCACCGCTAGCCGCCACGACTACCGCTCCGACTCCAAACACGCTGATGTCAAGAGGCAGGTAAAGAAACCCAAGTATCTTAATAACTCCATGGATTCAGATGATGACAACAACGACAGTTTTACGGCGGATATTGACGAATCTAATGAACCCACAAACGAATTTAAATGCGCCAAATGCCCCAAATCATTCAAATCTATGTGTGCCGTGAACTCTCACCAGCGTGTCCATAGGAATGACAAATCTTTGGAGAACATTGTGACGCCCACCAGTACTCCACTGGGACGCAGCATAGAAAGCGATAATGCGTCCTCAAGCAGCAAGCAGGTCTATTCAGGTAGCAACAAACGGGTCGTCGAACTTAGGAGATTGGGTAGTGCGGCGAAAAGAAACCTTAATGCTTCATCAATGGATACAGACGATGATGACAACGAAAACTCGAGTTTTAGAAGCGAGACAGCCGCCACGGACTCAGACGAATCAGCAGCTAAAACAGTGTTCAAATGTCAACAATGCCCCAACGAGTACGGGACAATTCGTAGTCTAACCATGCACATGAGGCTCCATAAGCGGCAGAATATGAAAGAGGAACCCCCTGAAGATTCAGCGACTGCCGAGGCCCAAGACGACGACGATCTTAGTTGCAATAAATGTGGCAAGACTTATAAGTTGAAGATAATGCTCAAGCGTCACCAACAGAACTGCAAAGAGACACCCACGACAGAATCCACTCCACAGAAAGAACTTCTGGTGTGTCTTGAACCAGTTGATGGGAAACACAAAGTTAAGGTCGAGTGTGACATCTGTACTGCCAAATTCAAGACTGTTGATAACCTAAATAAGCATCTAAGAGTAGTGCATGCCGCTGCACCGAAAAGAGTTTCTGCACGACTCGTAGGGAATGTATCAGTCCCATGCATTTACTGCCAAGAGTCATTCGACGATTATTACGTCCACAGCGCTCATTTCAACACTTGTCCGAAGCGCGATGAACGCAACACGTTCAAATGTCCTTTATGCTTAGTGATTTCGTTCAAGAAGATGGCGTATTTTGGTCATATAAAGAACTCTCACTTCGAGCCGGAGACGCGGGAACAGGCGGATCTCAAAGAAGACGAGCTTAAGTGTAGCTTCTGTAATAAAAGACTCGCCAATCAGCAGCAGTTGATCACGCATTTGGCAGCTCATGTCTCGAATATTGATGAAGCCGGTGTGAATGAAGATACCAGAACACCGACAGACACACCAGGCTTGTCCTACTGCAAGTACTGCCAGAAGGAGTTCAAATATAAAGGCGCCATGCTGTCCCATCAGCAGTCGTGTGTCAAACAGACTAAAGGGAAGAATGAGGTCAAACTTGAACTGCAAAAGATCCTAGAGGGATCCAGCCAGAATTGTGTGGAGGAGGAATCGAGTCAGGACGATTTTGACAACACGTGTGATGTATGCGACAAACAGTTTATGTACAAAGGACAGTTGTTGCACCACAAGAAGACTAAACATAATATGACGGCGAATAACAGTGCGGGTGTCGCTAACTTGTCCGCGAATGTCTCAACCCTTGATGAGACTGCTTTGAACGACGAGTCCAGAACATCAATAGCAAACACGTCAACAAACTCAACGGGCGCAATGAACTGCTCTTACTGCCAGAAAGATTTTAAATACAAGCGCTCGTTAGCCAATCACGAAGCGACATGCTCCCAGAAGGACACTGCCACCGAACAGGCAAATGACGACGAACCCAATGACCAGTCTGATGAAGATGTCTCCAGCCCAGACGAGAACTACGACAACACTTGTGATATATGTGAGAAACAGTTCTCGTATAAGGCTATATTACTGCACCATAAAAGGACCAAGCATAACATGTGCTCGGGGACTAAACGAGCTGGCATTACTCTCAATGACTGCGGAGTCAAGTGCCTGATATGTGACGAGGACATGAAAGTGAAGGATATATACGAACACAATAAGAAACATATCGCTATGAATATGAAGCCGAGGAATATTTATACTTGCGGTGTGTGCGGAAACTTCTTTAAGAACCGCGCTGCTCTTGCTACCCACATTAAGTATGTGCACAGATTGAAAAAGGAAACACCGAACGCCCAGAAAATCCAAAGCATAGATCCGGCGGCGTTTTGCGAGGTGATCGTGGCTAAGGCGGAGCCTCAGGATTGGCCTCAAGATACCAGTGAGTTCGACTCAGTTACCGACGGCGTGGTGAAAGTAGAAGCTACAGGGACAGGGGGCTTCGTGTGTCCCACTTGTGGGAAGAATATGCCTTCCTCCATGTCGCTCAAGTGCCACATGGCATGCCATAGGAGGTATGCTGGCGTTGTCGGCGGGAGATACGAGTGCTTCGTGTGTAAAGAGGTGTTCAAGTTCCAAGTGCACTACAAGATGCACATGCGCATTCACTACAACGACCCCAACCTGGACGCCAAACACCTCACCTGCCCCATCTGCAACCGCAAGAACAAGAACCTGCGCGCCGCCCGTGCGCACATGGCCTATCACCAGCAGACGCGCTTCCAGATCAAGGACTACCAGTGCTCGCTCTGTAAGCGCGTCTTCCAGAAGCGCGGCGTCTACCTCGCGCACATGGCCAACCACCAGAAGCGAGGCGACACCGGCAAGAACGTCGGCTCCACCAACGAGCCCTTCGACAAGGGCTTGCTAGACGGCACTTACACCTGCGAGCTGTGCGGTAAAGCCTGCGACTCGGAGCTGTCCCTCAAGCACCACACCATCTGGCACAACTCCAAGGGCTCGCTGTACGCCGCGCGCCACGAGTGCGTCATCTGCAAACTGCAGTTCACCAACAAGAAAACGCTCACCTTACACATACGCAAGCACTACGAGAACGAAAACGGACCCTTCAAGTGCCATCTCTGCAGCAAAGGTTTCACCGAGGAGGAGTATTATCGAAGACATTTAAGGTCGCACAACTTCGACCACTCCGCGCACAAGAGGCGGATAGAGAGGCTGCGGATGAACCAAGTCAAGTGCCCGATATGCACGCGGTACTATCCAGATTTAGTGAAGCTGATACGACACTTGAAGCGGACGCATCCGGAGAGCAAAATGATTAAAGCGGACCCCGACGCGCCGCCGCAGCGATACTACCCTTGCCAGCTGTGCGCTAAAGTGTTCTTAGACGAGCGACGACTGCAGTTCCACAAGGAAGCTCATCTAAGAAAACCAGTGTTTTATAAGTGCAAATTTTGTGGAAAGAACACCATTTCATTGAAGAGccataatattcatattaagtCACATTTATGCACGAAGCACATAGACGATCCGCTAAAATGTCCGAACTGTGATGAAAGATTTATAAAAGGCTACGATCTCCACTACCACCTGCGCGATGTCCATAATATCAATGAGACGTGGATTGCGCCGAGAACGGCGACCGACTTGAACGTACCGCTCCAAGACCTGCAGTGCTCCGTGTGCCTGAAAATATTAGCAAGCAAAGGAAACTTCCAGAGACACATCGACTACCACAACTCGCTCAGATGCAATTACTGCTTTGAATACTTCAGCACGACCCGCTTCCTCGAGGGCCACCTGTCGTTTATGTGCgagaaaaagaaattaataggCAATACAGAAATACACCCGAAGCGAGTAAAATGCCACATATGTTACAAAGCGTTCCATCTGCAAGTGAAACTAGATTGCCATCTTTTCACGCAGCACGGCATAGCCATCACTAAAGAAGCGTCCGCGAGCAAGCAAGAAATCGTCTGTGACTACTGCTTTAAAGTATTCGAGAACGAATACGCTCTGAGCACGCACAAAATATATCATAGAACCATCGGCTATTACGGATGTAAGTATTGCGCTAAAAAGTTCAACACGCTAACGCAATACAGAAAACACAAAAACGCTCACCTTGCCGTTTTAAATGTCGACAATCCCACCAAATGCGAGCATTGTGAGGAGAGGTTCGTGTCGTTCAGAGACATGATAAGTCACATGAAGGACGAGCACGGAGACAACAGCGAGTGGTTTATAGAACCGAAAGACTCTATAGAGGAAACGTGTAACATCTGCAATAAAACATTCTTTAACTTGCATAAACACTTGTCATACCACGAAGAGAATAGATGCAAGAAATGCGGCGAATACTTCCTTTCAGTGGTTGATTTCGACAACCACCTGTGCACCATAGAAAGTGACGATGAACAAAACGCAACCTGCAACGGCGACGCCAGCGCTGCGTACGAAGAGTGCAACTTCTGTTTCAAGCCCATCACCACCACTAACTCCAAGTTGAAGCACGACAAAATCCACAGGAGCTCCGGCTCGATATCGTGCCGTTTCTGCCGCAGTAAGTTTAAAACTATCGACGCTTTCAACATCCACGCATTCACCCACCGAAGCAGGAAGTATAACAAGAAGCCGATAAAATGTCGTAAGTGCGGCGAGAAATTTGTGAAATACGGaccttttataaaacatatgagATCGGCGCACAAGCTGCCGTTGAAACTGCATTATCGTGCGATTGTGAAGTCGGAGAGATGCGTGGTCTGCGGAGACGAGTTTCCCAACCTGCACAATCACTATCGAGCTCATCTGCTGAACCAGTGTCAACAGTGCCGCAAGTACTTcacatcatataaaatatttaatgctcaCGAATGTGACAAAGAGGACAGCGACCCATCCAAAGTATTCACTTGTGACGAAGATCTGATAGCTCTGATAAACTCATACGAGCCCAAAGACGATAAGAGTGGTGAGAGACTGTATGGAGACAGTGAAGACGAAGACATGGCGGAGAATGAGCAGTTAGAGTACAATGAGGGTACGCAGGAATATCAGGAGGATAGCCAAGATAGCCAGGATATGAAGAAGTTTGAGATATTCCAGGCGCCCATCATATCTGACGTACTGTCTCTGTGCCAGGCAGAGGAGAGCAGTCAGGACGCTGACGTCATCAAGCCAGCTGACGCTAATGTGTTCGTCATCAGCAGTGATGAGGAGGAGGAGCCTAATGCCGTTAATCCACGTGGCCCCCGCGTTGTGGTGGTAGATTAA
Protein Sequence: MALELGKCRLCLKLGDFYSIFTVDNGVPLSEMVMECSRVKIYEGDGLPDKVCSECIQKLSGAYIFKQQCERADQDLRRNYVPPPGFCPLSPNRQSSDSAFSTHTDYSNLNKSTEGKVTPASSARKRRTESDDTSTASRHDYRSDSKHADVKRQVKKPKYLNNSMDSDDDNNDSFTADIDESNEPTNEFKCAKCPKSFKSMCAVNSHQRVHRNDKSLENIVTPTSTPLGRSIESDNASSSSKQVYSGSNKRVVELRRLGSAAKRNLNASSMDTDDDDNENSSFRSETAATDSDESAAKTVFKCQQCPNEYGTIRSLTMHMRLHKRQNMKEEPPEDSATAEAQDDDDLSCNKCGKTYKLKIMLKRHQQNCKETPTTESTPQKELLVCLEPVDGKHKVKVECDICTAKFKTVDNLNKHLRVVHAAAPKRVSARLVGNVSVPCIYCQESFDDYYVHSAHFNTCPKRDERNTFKCPLCLVISFKKMAYFGHIKNSHFEPETREQADLKEDELKCSFCNKRLANQQQLITHLAAHVSNIDEAGVNEDTRTPTDTPGLSYCKYCQKEFKYKGAMLSHQQSCVKQTKGKNEVKLELQKILEGSSQNCVEEESSQDDFDNTCDVCDKQFMYKGQLLHHKKTKHNMTANNSAGVANLSANVSTLDETALNDESRTSIANTSTNSTGAMNCSYCQKDFKYKRSLANHEATCSQKDTATEQANDDEPNDQSDEDVSSPDENYDNTCDICEKQFSYKAILLHHKRTKHNMCSGTKRAGITLNDCGVKCLICDEDMKVKDIYEHNKKHIAMNMKPRNIYTCGVCGNFFKNRAALATHIKYVHRLKKETPNAQKIQSIDPAAFCEVIVAKAEPQDWPQDTSEFDSVTDGVVKVEATGTGGFVCPTCGKNMPSSMSLKCHMACHRRYAGVVGGRYECFVCKEVFKFQVHYKMHMRIHYNDPNLDAKHLTCPICNRKNKNLRAARAHMAYHQQTRFQIKDYQCSLCKRVFQKRGVYLAHMANHQKRGDTGKNVGSTNEPFDKGLLDGTYTCELCGKACDSELSLKHHTIWHNSKGSLYAARHECVICKLQFTNKKTLTLHIRKHYENENGPFKCHLCSKGFTEEEYYRRHLRSHNFDHSAHKRRIERLRMNQVKCPICTRYYPDLVKLIRHLKRTHPESKMIKADPDAPPQRYYPCQLCAKVFLDERRLQFHKEAHLRKPVFYKCKFCGKNTISLKSHNIHIKSHLCTKHIDDPLKCPNCDERFIKGYDLHYHLRDVHNINETWIAPRTATDLNVPLQDLQCSVCLKILASKGNFQRHIDYHNSLRCNYCFEYFSTTRFLEGHLSFMCEKKKLIGNTEIHPKRVKCHICYKAFHLQVKLDCHLFTQHGIAITKEASASKQEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCKYCAKKFNTLTQYRKHKNAHLAVLNVDNPTKCEHCEERFVSFRDMISHMKDEHGDNSEWFIEPKDSIEETCNICNKTFFNLHKHLSYHEENRCKKCGEYFLSVVDFDNHLCTIESDDEQNATCNGDASAAYEECNFCFKPITTTNSKLKHDKIHRSSGSISCRFCRSKFKTIDAFNIHAFTHRSRKYNKKPIKCRKCGEKFVKYGPFIKHMRSAHKLPLKLHYRAIVKSERCVVCGDEFPNLHNHYRAHLLNQCQQCRKYFTSYKIFNAHECDKEDSDPSKVFTCDEDLIALINSYEPKDDKSGERLYGDSEDEDMAENEQLEYNEGTQEYQEDSQDSQDMKKFEIFQAPIISDVLSLCQAEESSQDADVIKPADANVFVISSDEEEEPNAVNPRGPRVVVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820323;
90% Identity: iTF_00819397;
80% Identity: -