Tjap001621.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Theretra japonica
Gene Symbol
gl
Assembly
GCA_033459515.1
Location
CM065928.1:7183796-7194112[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 6.3e-06 0.011 16.1 0.1 18 41 343 363 335 365 0.88
2 5 0.073 1.2e+02 3.1 0.2 18 41 371 391 367 393 0.85
3 5 0.01 17 5.8 0.9 16 38 397 420 387 420 0.77
4 5 0.00062 1.1 9.7 0.6 18 40 427 446 423 449 0.89
5 5 0.27 4.5e+02 1.3 1.2 18 40 455 474 447 476 0.82

Sequence Information

Coding Sequence
ATGGAGTGCTACGTACCCAACAACCCGCAGTATGGCGGCGGCGAGTGCTGCCAGGGCGGCTGTCACGGCCTGTGCTGCGACCCGCTGCAGTGCTCCTGCCTCGTCAGAGACTTTCCCGAACAGTGCTGTCAGCAGCAAGAAGCGGAGAACTGTTGTCCGGAGAATGGTTCGGAGCTGAACGCTCTCAGCGAGGGGATCACGCCGTGCGATGTGCTGGGCGAGGTGAGCGGCGGCGACGGCTGGCCCACGGAAGACATGGGCTCCTTCTCCTTGCCGTCACTGGAGCTCGACCCGCTGCCGTCGCTGTTTCCCTTCTCACCCTGCCCGGGGTACAAAAACAACGCGGGAGAATGCCGTGAGCGGGGCGGGGGCGAGGCGGCAGACGTCCTCCTTTCCCTCAAACACGCCGTCGTCCACGGCGACTGCTCCTCCGACAACGTACACCCTCAGGTGATGGTGAACAGTGGTAGCGGCTACCCGTACTACGAGCATTATAGCACTGCACCCCTGTTCCCCACCATGAGCGTCAATGTGTCCATGAACATGACCATGCACGGCTGCCCCCCTGACCAACTGTGCTCCCAGGTGCAGTGGAATCAAAACGCGTCGTCACCTTCGGTCAATGTGGTGTACCCGCAATCCCAGAACGTGATCAGtccaacatcgtatccatcagCAACTTATTCCTTCACAGCAGACTTCAGAACACCAAACCAATCAGATCCCCTGATCACCGCCACTTCCACATTCAAGCCTTTACTGCAAAGTCCTCCAAAGCCGAATCCAAATTACATATTCCAACAGAAGCCGAATTTTAGTAATCAGAAGACGGTGCCGATGAAAAGGCCAAAGATGTGCGTGCAGGAGGGTCAGAAGGAACAGAATATAGGTAGCGGGTATTTGCTGAACCATCAGACTCAAATGCACCCGCAAGAGTATGGGTATACTACTTGCGTCAATGCGTCGGGGAAGGTCCAGGTGGGTGCATTAAGCGGTTGTTCCGAAGATGATGAACAGAAGCCTAACTTGTGTCGTATCTGCGGCAAGACTTACGCTCGGCCCAGCACTCTCAAGACTCATCTCCGGACCCACTCTGGCGAACGACCCTACCGCTGCGGCGATTGCAACAAGAGCTTTTCTCAGGCGGCGAACCTTACGGCACACGTCCGGACACACACGGGACAAAAGCCTTTTAGATGTCCAATTTGCGACAGAAGATTTAGCCAAAGTTCCAGCGTGACCACTCACATGAGGACGCATTCCGGTGAAAGACCATACcaATGCAGGTCGTGCAAAAAGGCATTCTCCGACAGCTCGACGTTGACTAAACATCTCCGGATACACTCGGGCGAAAAACCATATCAATGCAAACTATGCTTGCTTAgGTTTTCTCAATCGGGTAATCTGAATCGACACATGCGTGTGCACGGCAACATGTCTGGAGGCATGCTCGGCTGA
Protein Sequence
MECYVPNNPQYGGGECCQGGCHGLCCDPLQCSCLVRDFPEQCCQQQEAENCCPENGSELNALSEGITPCDVLGEVSGGDGWPTEDMGSFSLPSLELDPLPSLFPFSPCPGYKNNAGECRERGGGEAADVLLSLKHAVVHGDCSSDNVHPQVMVNSGSGYPYYEHYSTAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNASSPSVNVVYPQSQNVISPTSYPSATYSFTADFRTPNQSDPLITATSTFKPLLQSPPKPNPNYIFQQKPNFSNQKTVPMKRPKMCVQEGQKEQNIGSGYLLNHQTQMHPQEYGYTTCVNASGKVQVGALSGCSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYQCRSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNMSGGMLG