Basic Information

Gene Symbol
-
Assembly
GCA_033459515.1
Location
CM065953.1:3945397-3950126[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.061 59 4.2 0.0 1 13 73 85 73 90 0.88
2 5 0.054 52 4.3 0.0 21 44 338 362 335 364 0.85
3 5 0.07 67 4.0 0.1 22 43 439 459 409 462 0.75
4 5 0.0014 1.3 9.5 0.2 22 46 570 604 558 604 0.74
5 5 0.0041 3.9 8.0 0.1 2 44 653 704 652 706 0.76

Sequence Information

Coding Sequence
ATGGAGCAGGTGGTAGTGAAAACGGAAATGCAAAACAATGGGGAGATATTACTGTTTTATGTGGATGagaaTGGAGAAAATGAGGAAGGTGTATTAACAACTGTTGAGAATATAGAAAACCCAGATATGCAGTTAGACCATAGCAACTCATACATCATTGAAGAAAATGCTCAGGTTTCCTATGAAGTAGCTCAGTCCCAAGATTTTTCAGTGTCACGAGACCGATGGACCGATGAAGAAATGCAGAGACTTATGGTCTTCTATAATGATAACAAACAGACATTTCTTACTGGTTCGACAAAGAGAAGGCATTTGTGGGGGGTAGCATGCAAGACCATGCTTATGAATAAAAACCCCATAAGTTGCGACATGAAGTTAAGACACATGAAGGCTAAATATGttgaaatatgtaaaaacaaacACCGAACAGTTGAAATAGGTGATCAGTTGTTTGACCTATGCCATCAAGCCTTTAGTGATGACccacatttaaaatttttgatgGAATCCACAAATGAAGAGAGAGAAATTAAACTCCCTATAACCCAAAAACTCAATGATGGCATAGTAGTCCTTAAAAAGGTTAATACCCACAAATCAATAGATTCAAAAGTTGAAATGATGTTACAATTGTACATAAAGTATAAAAAGAGTTTTCAAAAAGAACATTTTACAAGGAATTTGTGGGAGACAATTGCTGTAGAATTAGGATCAGAAGATGGATTGTACTGGCAAAAACGTTTTCTGAATTTCAAACAGCATTACATTAGTTTGcttgaaaaaagaaaagacgGTATTTGTGAAATCAATTGGCCATATATGAAACTCTTTGATGAGATATATAAAGATGATGAAGATTTTCGAAGAAAGTATCCTTTTATTCAGGAAGAAATTATGGATGAAGAAACAGTACAGAGCAATCATGATCACGATTGGTTGGAGACTGAGAAAATGGTGCTAGTCAAATACAACTATGACTGTTTTGAAGATTTTCAAGATCCGAAGATTCCCAATAATTTCCTATGGACAGAAATTGGGAGACTTCTAGATAAAAGTCCGGAAGTATGCAAAGAAAAATACTCTGAATTAAAACAGGAGCATTATATCAAGTATTTGGAAGGAGGATATGATCTTCGTGAGCGCAGGCCTTTAgatattgtttttgattatATCATATCCAAGGAAACTGAACTTGAACTAAGTAAGAGCTATATCAGTGAATTTGGTATTTGGAAAACTGAGGAGATTGATGAAATTGCGCAATTTCTGTATGACAATGTTGAAATGTTCAAAGATCCTATATGCTACTTTGTTTGTTGGGGTATTGTCAGTAAGAAGCTGAAACGGCCCGTAGGTAGTTGTAGGCAGCAATGGGAAGAACTTGTTACTTTATACAAGAGTATACTTGATGATAAGAAAGAAAATCCTGATATGCAAATTGACTGGAGGTATATAGAGCTGTTTGATAGAATATTTGATTATGGCATGGACACCAATCTGTTAAATGGATATGAAAAACCTAAAGAAACAAAGGATGACAAAGCTGGCATAAAGAGAGTTAATGTTAATCTGAATGATTTGAAAACGGAGAATGGTACGGACGATGACGAATCATTCGATGAGAGAGGGTTTCCGAAACGATCGAGAAGTTCATCGGGAGATTCTAAAGCTTTCAAAATCCTAGAATACTACCAAAAGAACAAAGACAAGTTCTCAACTACCAACCGAAATAAACACAGCCTTTGGGAAGTTCTGGCTAAGCAAATAGGTATAACTGCTACACAATGCGCCCACAGATTTAGAAATCTAAAGCAAGTGTACACAGCGTACGTACAAAGAGAGATAAACAAACCAGAAATGCCGATAGTATGGCCGTACTATGCTCTCTGCAAGAAAGTCTTCGGCTACCGAGCAATAAAAGCCAAACTGAAGAATGGTAAAAATGATTCTGACACCGAAGAATGGTCTGCCAAAGAAATCAACAAGTTAATCAGTTATTTTGCGcagaattttgatgaaatatcaaataatattgacGATATGAGCAGATGGACTGCGTTGGCTAACGATTTAGACAAATCTGAGATGGCTTGTAAAGACAAGTTTATGGAACTGAGGAAGTCGTACAGAAAGTTGAAGACTCAAATAACAAGGAACCCAAATGTGAAGATTTCGTGGAAATATTTCAATACGTTTGAAGATATTTACAATTCGCGGGAGGAGAAAGCGAACCAAGTTATGATGGAGGTTGACGAACAGGAACATTATGAAGAGAGTAATGAACCAGAtgAAGAGGACTACCAGTGCATCATAGTAATTCCCGAAGGCGAAGACATTTCAAACATGGACAGTTCACAAATCATTGTTGAAGAAACCATAGAAGAACCCACTATGATGACCATCACTGAAACAAAACAGGCACCTAAAAAATGGACGAGACGAGCTAAAAAACGCCTCATTATCTTGTATATCAACTACATAAGATCTAACAAAGGGAAGCAGATTATTTCCAAAGAGATGTGGCAAGAGATTGGAGTGAAATTGGAGAAAAGCCCAGTTGTCTGCAAGAAAATGATGATCCGACTGAAGAATGTTTACAAAAAGATTTCCAGTAGTGATGATGTAGAGAAAAAGAGTACACCACTATACCGACTTATGGAAAAAGTAATGAAATTGAAACCTAGATTTGTGAAAGTTGGTCAAAAGACACAACAGGAGAAAGTGTACAAGGATGTACAAATGGACAATGTTAAAGTAGACAGTGCTCTACATTATTATTTGCAACACATTGAAGACTTTGTCAACCCGAAATTTGAGAAGAAATTCCTATGGACAGAATTAGCTAACACCATTTCGGAgccagtaaataaaatatacaataaagttGGTTATCTAAAGCAAGCGTACAACAATGATGAAATAAATCAGGATAATTTACAGTTCCTTGATTTGATACGAGAGATAATTGCTAAAGAAATAGCAATAAACCTTATTTCTGATATCGAAAACGATGCTGTCCAAGAGTATCCGGAGAGAGAATGGATTGATGAGGAAATGGAACAATTACTGCAATGGTATTTGAGCAATTTGGACAAATTTAAAAACCCAAAGTTTGTTCGAAGCTATCTATGGATCGAAGCTTCCCATATTTTGAGAAGGAGTCCTTTGGACTGCTCGAAGAAAATGTCAGAAATAAGGACCCAGTACCGTAATATGGTTAAGGAGAATTCTGAGGATTTGTATAATTGGAAGTTTTATGACTTGTGTCAGAAGATTTATGGGACGGGGAAGAAGGTCAACCCATCAAATGCTTAA
Protein Sequence
MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTVENIENPDMQLDHSNSYIIEENAQVSYEVAQSQDFSVSRDRWTDEEMQRLMVFYNDNKQTFLTGSTKRRHLWGVACKTMLMNKNPISCDMKLRHMKAKYVEICKNKHRTVEIGDQLFDLCHQAFSDDPHLKFLMESTNEEREIKLPITQKLNDGIVVLKKVNTHKSIDSKVEMMLQLYIKYKKSFQKEHFTRNLWETIAVELGSEDGLYWQKRFLNFKQHYISLLEKRKDGICEINWPYMKLFDEIYKDDEDFRRKYPFIQEEIMDEETVQSNHDHDWLETEKMVLVKYNYDCFEDFQDPKIPNNFLWTEIGRLLDKSPEVCKEKYSELKQEHYIKYLEGGYDLRERRPLDIVFDYIISKETELELSKSYISEFGIWKTEEIDEIAQFLYDNVEMFKDPICYFVCWGIVSKKLKRPVGSCRQQWEELVTLYKSILDDKKENPDMQIDWRYIELFDRIFDYGMDTNLLNGYEKPKETKDDKAGIKRVNVNLNDLKTENGTDDDESFDERGFPKRSRSSSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLAKQIGITATQCAHRFRNLKQVYTAYVQREINKPEMPIVWPYYALCKKVFGYRAIKAKLKNGKNDSDTEEWSAKEINKLISYFAQNFDEISNNIDDMSRWTALANDLDKSEMACKDKFMELRKSYRKLKTQITRNPNVKISWKYFNTFEDIYNSREEKANQVMMEVDEQEHYEESNEPDEEDYQCIIVIPEGEDISNMDSSQIIVEETIEEPTMMTITETKQAPKKWTRRAKKRLIILYINYIRSNKGKQIISKEMWQEIGVKLEKSPVVCKKMMIRLKNVYKKISSSDDVEKKSTPLYRLMEKVMKLKPRFVKVGQKTQQEKVYKDVQMDNVKVDSALHYYLQHIEDFVNPKFEKKFLWTELANTISEPVNKIYNKVGYLKQAYNNDEINQDNLQFLDLIREIIAKEIAINLISDIENDAVQEYPEREWIDEEMEQLLQWYLSNLDKFKNPKFVRSYLWIEASHILRRSPLDCSKKMSEIRTQYRNMVKENSEDLYNWKFYDLCQKIYGTGKKVNPSNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00820033;
90% Identity
iTF_00819128;
80% Identity
-