Tjap013014.2
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- clz9
- Assembly
- GCA_033459515.1
- Location
- CM065944.1:846527-848599[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-08 1.3e-05 25.1 0.1 1 37 16 52 16 63 0.92 2 2 1.5 1e+03 -0.2 0.0 13 27 665 679 662 682 0.86
Sequence Information
- Coding Sequence
- ATGCCGCGAATTTACAAGAAGAAAGGGACTAGGACGCAAGACGTCGATGAAGATGCAATGTCATCTGCAATGcatgaagttttaaataaaactttatccaTCAGAAAATCCGCACAAAAATATGGCATCAAACCGACAACTCTTGCAAGTCGTTTGACAAATTATCATAAGAAAGCTGCTTCGATTTACCAAGATACTGCCAGTGAGCGTGTATTTAGTTCCAAATTCACGTCAAATCAAGTTTTCACTGTAGAAGAAGaaactcttttaaataaatatatcattgaaTGCTCAAAAATGCACTACGGTTTGACCATAATACACATCCGTAAATTAGCATATGATTTTGCAcagcaaaataaattacgttATCCTCCTTCGTGGGATAATAATATGATGGCCGGTAAAGAATGGTCGGACAGCTTCCGTAGGAGGAATCCAAATTTAAGTCTAAGAAAACCAGAGAACACAAGTGTGGCCAGATCATTTGGTTTTAACATATCAGCTGTTAaccatttttttgaaaatttagaAAATGTTCTACGAAAATACGAATTTTCTTCAGATcgaattttcaattttgatgaATCGGGTATATCTACAGTGATGAACACGCCAAAAGTGTTGGCTGAAAAAAACCAAAAACAAATTGGCCAAATTGTTGCCCAAGAAAGGGGTGAACTCGTTACGTTTGGTGGTATCATTTCTGCTAGTGGGAACACAATTCCTCCACTCTTCATTTTTCCCAGGGTGCACTATAAAGATCATTTCCTGCATGGAGCTCCAGAAGGGAGTTTAGGAGTTGCATCAAAGAGTGGTTGGATAAATTCCGGTATATATTTGGAGGTTCTAAAACATATTCAAAAGAAAACATCATGCTCTAAAGAGAATCCTATTCTGCTTCTGATAGATAATCATGAAAGTCACGTCACCATTGCGGCGGTAGATTACGCACGTGAAAATGGCATTGTTTTTCTATCATTCCCGCCCCATACTACGCACCGTCTTCAACCCTTGGATGTGGGTGTGTTCGGACCTTTTAAGGCTAAACTGAAGATTGCATTTAATgattggaatataaataatcCAGGAAAAACTCTGAAATACCTTGATATTCCTCAACTTGCCAAAATTGCATACTTTGAATcatttaattgcaaaaatattataaatgcttttGAAAAAACTGGAATATGGCCGTTCAACAAATTAGTTTTTAGTGAGGATGACTTTGcacccataaatatttatcattcagaCTCTGTCAACCCAAATATAAGTGGTCATAATACCACAACCGATGCTGCTGAAAACATAGATCTTACACAGCCAGAAATATCACAGAGATCATTATCTGTGTCACCTTCTTTAATATCTCACCAACTCGACTTACCATCTACTTCAACAGCTGTAGGATTAATATCACCGGAAATCATTCGACCCTTCCCGAAAGTAGATAGAAATGCATCCAAAAAAGTAAGAAAAGGAAAAACGCCCGGAAAATCTAGAATATATACAGACACACCTGAAAAGAATAGATTGGAAGAAATTGAAAAGGTGAAAGACATGAAAAAACAagaacaagaaaaaaaacaaagggCTAAAGAAATAAAGCGTGCTTTAAAATTAGCGGaggaaacaaatttaaaaactaaaccaaagaaattgaaaaaaatagtaGAAACTGATAGTGAAAATGAGACTGATATAAGTTTACGAGAAAGTTCTTGTTCTTCTGTTGAAGAAAGATCTGATATTGAGAATGAAACTCCAGTTGTGACGGAAGATATCAAACCAGGAAGCTTTGCATTAGTgaaatttgaaaagaaaaaaagtgttttacaCTATGTAGGACagattataacaaaatacagcCCCACGGAATATAAAGTTTCATTTTTAAGAAGGAAACCTGGTACCTGGAAGTTCGTTTTTCCCAATACAGAAGATAATGGAACTGTATACTTGTCTGATTTGGTTTGTATACTTCCTCAATCCAAATCGACATCTACTTCGCGAACAGCTAAGATATTTAGTTTTTCCAAAGATTTAGTCATGTATAATGTTCAATAA
- Protein Sequence
- MPRIYKKKGTRTQDVDEDAMSSAMHEVLNKTLSIRKSAQKYGIKPTTLASRLTNYHKKAASIYQDTASERVFSSKFTSNQVFTVEEETLLNKYIIECSKMHYGLTIIHIRKLAYDFAQQNKLRYPPSWDNNMMAGKEWSDSFRRRNPNLSLRKPENTSVARSFGFNISAVNHFFENLENVLRKYEFSSDRIFNFDESGISTVMNTPKVLAEKNQKQIGQIVAQERGELVTFGGIISASGNTIPPLFIFPRVHYKDHFLHGAPEGSLGVASKSGWINSGIYLEVLKHIQKKTSCSKENPILLLIDNHESHVTIAAVDYARENGIVFLSFPPHTTHRLQPLDVGVFGPFKAKLKIAFNDWNINNPGKTLKYLDIPQLAKIAYFESFNCKNIINAFEKTGIWPFNKLVFSEDDFAPINIYHSDSVNPNISGHNTTTDAAENIDLTQPEISQRSLSVSPSLISHQLDLPSTSTAVGLISPEIIRPFPKVDRNASKKVRKGKTPGKSRIYTDTPEKNRLEEIEKVKDMKKQEQEKKQRAKEIKRALKLAEETNLKTKPKKLKKIVETDSENETDISLRESSCSSVEERSDIENETPVVTEDIKPGSFALVKFEKKKSVLHYVGQIITKYSPTEYKVSFLRRKPGTWKFVFPNTEDNGTVYLSDLVCILPQSKSTSTSRTAKIFSFSKDLVMYNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -