Tjap016521.1
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- arid5b
- Assembly
- GCA_033459515.1
- Location
- CM065948.1:19638590-19654606[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-12 5.3e-09 36.6 0.0 3 89 230 302 228 302 0.90
Sequence Information
- Coding Sequence
- ATGGCTACGGTACACCACGCGAGGAGTGCCACGGAACCCCACGATATTGCGGACGAGGTGCTCGCCATCAACGATAAGGTGGTGGTCCGCGCGGAGGACCTGATGAGCTGGATGAGCGAGGGCGAGGGCTGGCGCTGGGGGCTGCGCGCCGTGTGGCGCGGCGCCTGCGCCCCGCCCGCCGAGCCGCGCGCCACGCAGCCGCTGCACCACACCAGGCTCGACTTCAGCGACGTCGAGAACGAGAAAAATGCTATTGCGCAAGACGCGGAGTGTCCGGGCGTGGTGGTGTTCTCGTACCCGCGCTACTGCCGCTACCGAGCGCTGCTGGCGCGCCTCGAGGGCATCCAGGCGGACTGGCTGCGGGACTCGCTGGTGGCCGCGCTGGGCGGGTACGCCGCGCCCACCACCAACACCAGGATCCTCTACTGCAAGGACACGTTCGAGTACCCTGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGTTGAAGGGGCGGCCACGGgggcgccggcgccgcgccgcgcgttCTCGCTCGCCTTCGCGGTCCTCGCGCTCCAGCGACTCTGACCGCGGCCCGCAGCCGCCCGACACGCCGCGGCGCGTGTCGCTGCGCAACGGCGGCGACAAGAGCGACGAGGAGTCGGGCGGCTCGCCCGCGCAGCACTCGCGCGAGGACCTGGACTTCCTGGCGCAGCTCACGCAGTTCTACAAGGACCGGAACGAGCCCTTCAAGGGACACACGCTCAAGGACTTGTCGCTGCGCGCGCTGTACTGGGGCGTGGTGTCGCGCGGCGGGTACGCGGCCGTGTGCCGCCGCCGCCTGTGGCGCGCGCTGGCGCACCACGCGCCGCAGGCCGCGCGCCGCCGGTACGAGAGGTTCCTCCTGCCCTTCGAAAACCACGAGCGGAAAAACGGCACCACGTTCAAGATCAACGGCAAGCTAGACGAGCCGCAGACCATCGACACCATCGACGTGACGGACTCGCCCCTGCGAGAGACTTCGCCTCCTGACACCGCCCCCGCGCTGCCCGACAAGCGCCTGCGCACGCCCTCGCCGCGCCGCCACGTGGACAGCGAGACGGGCGAGTACAAGGAGGACATGAACCTGGTCTCCAGGCCGGCCGAGGAGCTCAACCGGGAGTTCCTGGACTCGCTGCAGAAGGAGGAAGGTGTGAAGATCAGCGTCAAGCCTGTGGAGACGCTACTGGAGCCGCGCGAGGACCGGGGACATCTCAGCGAGCTCGCACATAAACTCATGGTGTCTGGCGGCGTGAAGGAGGGTGGCGCGGCGGGGGCGGGCGACGCGTGCGTCAACGGacacgcgcccgcgccgcccaacACGCAGAAGAGCGCTCGTCCGGCGGGGCGCAGCTCCCTGCGCGCCGTGCGCGTGAAGCCCGCGCGCCCGCACCTCGCGCCGCACACGCCACCGACGCTGGGCGGTCCGCGCGGAGACTCGTCGTGTTCCCCACCAGGggcgccgccccccgcgccgcacctcgcgccccccgcgcccgcccccgccgccgccaccaTCAACAACTTCGGCATCCACCACCCGCCGCCGCACCGCAACCACCACAGCGACGACGAAATCGTCGAGGTGCCGTACAAACCAAAAACGCCAGAGATCATCGACCTCGACGAGTATCCGGAGAGCCCACAAGCagtcaagaaaaaaaaattagatatcTTAAAAGAGCGCGGGCTGGAGGTGACGGCGCTGCCCCCCGCCGGGCTGGCGCCCCCCGCCTGGCCCCCCGCCGCGCCCCCCGTGTTCCTCAACCCCACGCTGCAGCACCAGATCCTCACGCAGGCGCAGATGCTGGGCGCCTACTCGCTGCcctacgccgcgccgccgccgccgcgccccccgcgcgtGCTGCAGGCCACCTGCACCTTCGGCAACAGCGGCCCGCAGAAGACCGTGTATGGCAACCCCAAGGACCCCTTCATGCCGCCGCCCCACGTGCTGCAAGGCGCGCCCATCAAGCCGCCCCGCGCGCCGCACCCCCACCCCGCGCCCCCCGACCCGCCGCACGTGCTCGACCTCACCTGCCGCGCCGACACCCCGCCCGCGCCTGCCGTGGAGATCCTGCGCGTGTCCGCGGCGCAGAACCTCTCCAACAAGACCTACGCCGAGCCCAAGCCCGCGCCGCCCAACCTCGAGATCACGCTCGTCAACAAGACGCACGCGCCCGCACCCGCACCCGCCGCACTCAAGAACCGCCCGCCGCAGAAGCGCTCCTCCAACGGCAAGTTCGTGTCGGCGAAGACGCCCACGCCGCCCAAGGAGTTCCCGTCGCCGGCGCCGTCGCCCTCTCCCTCGCCCTCGCCCAAGCTCAAGAAGCCAGCCATCGTGGTGCCCACGTACCAGCTGGCGGAGAgctcgccgcccgcgccgcccgcgcccgcgcacaaGGCGCTGCTCGTGGACATGCACAAGGCGGCGCCCGTGCCCTTCATGGACCCCTACGTGGCGCTGTACAGCAGCCTGGCGGGCCACATGGACCACCGCCAGCTGGCCGTGTACCGCGACCTCATGGCCACGCAGTTCCGCGGCTACGGCAACCTGCTCAACATCTCCACGCCCACCACCAAGAACTGA
- Protein Sequence
- MATVHHARSATEPHDIADEVLAINDKVVVRAEDLMSWMSEGEGWRWGLRAVWRGACAPPAEPRATQPLHHTRLDFSDVENEKNAIAQDAECPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTTNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAARSRSPSRSSRSSDSDRGPQPPDTPRRVSLRNGGDKSDEESGGSPAQHSREDLDFLAQLTQFYKDRNEPFKGHTLKDLSLRALYWGVVSRGGYAAVCRRRLWRALAHHAPQAARRRYERFLLPFENHERKNGTTFKINGKLDEPQTIDTIDVTDSPLRETSPPDTAPALPDKRLRTPSPRRHVDSETGEYKEDMNLVSRPAEELNREFLDSLQKEEGVKISVKPVETLLEPREDRGHLSELAHKLMVSGGVKEGGAAGAGDACVNGHAPAPPNTQKSARPAGRSSLRAVRVKPARPHLAPHTPPTLGGPRGDSSCSPPGAPPPAPHLAPPAPAPAAATINNFGIHHPPPHRNHHSDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPAGLAPPAWPPAAPPVFLNPTLQHQILTQAQMLGAYSLPYAAPPPPRPPRVLQATCTFGNSGPQKTVYGNPKDPFMPPPHVLQGAPIKPPRAPHPHPAPPDPPHVLDLTCRADTPPAPAVEILRVSAAQNLSNKTYAEPKPAPPNLEITLVNKTHAPAPAPAALKNRPPQKRSSNGKFVSAKTPTPPKEFPSPAPSPSPSPSPKLKKPAIVVPTYQLAESSPPAPPAPAHKALLVDMHKAAPVPFMDPYVALYSSLAGHMDHRQLAVYRDLMATQFRGYGNLLNISTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428786; iTF_00818934;
- 90% Identity
- iTF_00428786; iTF_00818934;
- 80% Identity
- -