Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387918.1:16867786-16879750[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.69 42 5.3 3.6 1 23 269 291 269 291 0.94

2 9 0.022 1.3 10.0 1.1 1 23 297 320 297 320 0.92

3 9 1.2 76 4.5 1.4 1 23 324 346 324 346 0.95

4 9 0.0015 0.091 13.7 0.8 1 23 351 373 351 373 0.98

5 9 0.00068 0.042 14.7 1.0 1 21 442 464 442 468 0.92

6 9 0.092 5.6 8.0 0.7 3 23 545 565 543 565 0.91

7 9 0.2 12 7.0 3.1 1 23 571 593 571 593 0.97

8 9 7.5e-06 0.00046 20.9 1.5 1 23 598 620 598 620 0.99

9 9 0.00044 0.027 15.3 0.1 1 23 626 649 626 649 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.69	42	5.3	3.6	1	23	269	291	269	291	0.94
2	9	0.022	1.3	10.0	1.1	1	23	297	320	297	320	0.92
3	9	1.2	76	4.5	1.4	1	23	324	346	324	346	0.95
4	9	0.0015	0.091	13.7	0.8	1	23	351	373	351	373	0.98
5	9	0.00068	0.042	14.7	1.0	1	21	442	464	442	468	0.92
6	9	0.092	5.6	8.0	0.7	3	23	545	565	543	565	0.91
7	9	0.2	12	7.0	3.1	1	23	571	593	571	593	0.97
8	9	7.5e-06	0.00046	20.9	1.5	1	23	598	620	598	620	0.99
9	9	0.00044	0.027	15.3	0.1	1	23	626	649	626	649	0.95

Sequence Information

Coding Sequence: ATGGTGGCAGAGGCTTCAGAACTGGACGAAAAACCCATCAAAGTTGAATATGATACTGACTCTAATTTAGTTGTACTAAATGCGACTAGTGATACTGAAGATGAATCCAAACCAGATTTAGCCTCATTGCAAGCAAATGATAATGCTGACAATTTGGAAGAAGTTACGGCATTAGAGAACAGCTTGATTGATCATACAATCGATTTTAAAGGAACGACATTAGAGGTGTTTGGTGATAGCGATTTAGATGCTGATGACCCATTTCTAAAAATAGGTTGTGTCAAAAAAAAGGTGGTTGGAAAAACTAAAAAAACCGATTATCACAAATTTGATGGTGACACTCAAGAACAGGTACTCAAACTATGTAAATCAAAATCTGAAACTGCTAATACCTCACTAGAACATAATATGCTTACTGTAGAGGAGCTGAAATTTCTAAGCAAGAGGGAGACAAACTCAGAGAAACGGATAAATAGAATACGGAGGCTTGTGTTGCAATTGAAGGAGAAGATGTTACAACGCATAGATGAAGGAAACTTAGATCTTGGAGAGGATGTCACATGGACTAAGGAACAGTATTTGGAGATGTATGCGAAGTGCGATAAAAGCCGGCTGTCGAGACTTGGCCTGCTCAAACCAGACAACGGAGAACCAGTGAGGATAAAAAAATTACTTCTTTACCTCATAAGGCGATACAGTCCCGAATACGAGACTGTATTCGACATACAACAACTCACCACTCAGGACTCGAAACTAGCAGAGTTCCACGCGAGAAAGAATTACAAGCAGTATTTAACAGCTGAGTTTAAGTGCGACAAATGTTATAGAGGGTTCACTGCGCAGTGTATGCTTGATTACCATAACAAGTGGCATGATCCGGTTCGTCAGCACGCTTGCGACATTTGTTCAATGCGATTCCCATTGCGCAAAACTCTTAAGCTTCACCAGAGCGGAAATCATTCCTCCGTCTATCGATGCAAACTGTGCGATGTCCTCACATATAATTTCGAGGCTATGTTCAATCACTACCAGCAACATAAAGGCGTGACGTACTCTTGTGATACCTGTTTAAGCGAGTTCAGAAGTAGGAGTGCTCTAAATACGCATCGTGCAACGCACACGGCTCACAAATGCGCGCATTGCTTGCATCGGTTCATGACTAGCGCCAGACTCGACTGTCATATGAAGCTTAAACATCCAAACGCACCACCACCGGCTGATGAAGGCTCCGAGAGAGAGTCTTGCGTCAAATGCGCCGTGACTGAGTCGCGCGACCCTGGCATGCCATGCGGACATAAACAAACGAGAAAGAAAATTGTTCGGTTCAAATGCCACGTCATTGATTGCCAGCTCCATTTCAAAACGGCCGTTGAATTGCGTCAACACATTCTGGAAACTGGACACGTTAGACGAAGTCGCCAACGTCCTGGCTTAGACAAACTGGTGTGGTACAAACAGAGGACTAACATTCCCAAAAAGAAAAAACTAAACACTCTACCAGATAAACCTTATAGGACATGCCCTATTTGTCAAGAAGAAGTTCCCAACAAGTTTAGCAGGGCGCTGTATAAGCACCACCAAGATAAACATCCGTCAGTGCCGTACACACATGTTAACGAGAGGAATCACCTTTGCGAACAATGCGGCAAGTCATTTTTGGTTAGATCAGTATATCTGGATCATTTGAATGTACACTCGGGAGAGCGTCCTTATGCCTGCTCCGAATGCCAATCGCGCTACAGCACGCGACACAGGCTCCTCCTACATAAAGAGCGGCACGGACCGCCACGCTACGAATGCGATTATTGCGGGAAGAAATTCCTCTCATCGGCTAATCTGTTTATGCACAGGCGGACTCACATCGGCGATCGCTGCTTCAAATGCGAGATATGTGGCAAGGGCTTCCTGCATGCTGGAGCATTAAAGGAACACGTGAAGGGAGTCCACAATCAAGTGCGCAGGGCTAAGAAGACAACGCGCAAAATCACCAACAAATTATCAAGTGCGAGTTAA
Protein Sequence: MVAEASELDEKPIKVEYDTDSNLVVLNATSDTEDESKPDLASLQANDNADNLEEVTALENSLIDHTIDFKGTTLEVFGDSDLDADDPFLKIGCVKKKVVGKTKKTDYHKFDGDTQEQVLKLCKSKSETANTSLEHNMLTVEELKFLSKRETNSEKRINRIRRLVLQLKEKMLQRIDEGNLDLGEDVTWTKEQYLEMYAKCDKSRLSRLGLLKPDNGEPVRIKKLLLYLIRRYSPEYETVFDIQQLTTQDSKLAEFHARKNYKQYLTAEFKCDKCYRGFTAQCMLDYHNKWHDPVRQHACDICSMRFPLRKTLKLHQSGNHSSVYRCKLCDVLTYNFEAMFNHYQQHKGVTYSCDTCLSEFRSRSALNTHRATHTAHKCAHCLHRFMTSARLDCHMKLKHPNAPPPADEGSERESCVKCAVTESRDPGMPCGHKQTRKKIVRFKCHVIDCQLHFKTAVELRQHILETGHVRRSRQRPGLDKLVWYKQRTNIPKKKKLNTLPDKPYRTCPICQEEVPNKFSRALYKHHQDKHPSVPYTHVNERNHLCEQCGKSFLVRSVYLDHLNVHSGERPYACSECQSRYSTRHRLLLHKERHGPPRYECDYCGKKFLSSANLFMHRRTHIGDRCFKCEICGKGFLHAGALKEHVKGVHNQVRRAKKTTRKITNKLSSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -