Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387921.1:17839438-17854821[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.18 11 7.1 2.1 1 23 242 265 242 265 0.97

2 21 0.36 22 6.2 0.2 3 23 292 312 290 312 0.96

3 21 0.0017 0.11 13.5 1.1 1 23 332 354 332 354 0.98

4 21 0.36 22 6.2 1.4 1 23 358 380 358 380 0.94

5 21 0.73 45 5.2 0.2 1 20 384 403 384 407 0.80

6 21 0.014 0.84 10.6 0.9 1 23 413 436 413 436 0.93

7 21 0.066 4 8.5 0.2 1 23 500 523 500 523 0.96

8 21 0.29 18 6.5 2.0 2 23 549 571 548 571 0.93

9 21 0.00057 0.035 15.0 2.0 2 23 594 615 593 615 0.96

10 21 0.015 0.91 10.5 1.5 1 23 619 641 619 641 0.96

11 21 0.072 4.4 8.4 1.1 1 23 645 668 645 668 0.95

12 21 1.6 98 4.1 7.2 1 23 674 697 674 697 0.96

13 21 0.019 1.2 10.1 2.6 1 23 759 782 759 782 0.95

14 21 6.1 3.8e+02 2.3 0.3 3 23 809 830 808 830 0.93

15 21 4.3e-05 0.0026 18.5 0.9 1 23 851 873 851 873 0.98

16 21 0.67 41 5.3 0.1 1 23 877 899 877 899 0.94

17 21 0.11 6.6 7.8 1.0 2 23 904 926 903 926 0.86

18 21 0.038 2.4 9.2 4.7 2 23 931 953 930 953 0.96

19 21 0.0031 0.19 12.7 1.8 1 23 959 982 959 982 0.93

20 21 0.0016 0.097 13.6 0.4 1 23 988 1011 988 1011 0.98

21 21 2.1e-05 0.0013 19.5 1.4 1 23 1017 1039 1017 1039 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.18	11	7.1	2.1	1	23	242	265	242	265	0.97
2	21	0.36	22	6.2	0.2	3	23	292	312	290	312	0.96
3	21	0.0017	0.11	13.5	1.1	1	23	332	354	332	354	0.98
4	21	0.36	22	6.2	1.4	1	23	358	380	358	380	0.94
5	21	0.73	45	5.2	0.2	1	20	384	403	384	407	0.80
6	21	0.014	0.84	10.6	0.9	1	23	413	436	413	436	0.93
7	21	0.066	4	8.5	0.2	1	23	500	523	500	523	0.96
8	21	0.29	18	6.5	2.0	2	23	549	571	548	571	0.93
9	21	0.00057	0.035	15.0	2.0	2	23	594	615	593	615	0.96
10	21	0.015	0.91	10.5	1.5	1	23	619	641	619	641	0.96
11	21	0.072	4.4	8.4	1.1	1	23	645	668	645	668	0.95
12	21	1.6	98	4.1	7.2	1	23	674	697	674	697	0.96
13	21	0.019	1.2	10.1	2.6	1	23	759	782	759	782	0.95
14	21	6.1	3.8e+02	2.3	0.3	3	23	809	830	808	830	0.93
15	21	4.3e-05	0.0026	18.5	0.9	1	23	851	873	851	873	0.98
16	21	0.67	41	5.3	0.1	1	23	877	899	877	899	0.94
17	21	0.11	6.6	7.8	1.0	2	23	904	926	903	926	0.86
18	21	0.038	2.4	9.2	4.7	2	23	931	953	930	953	0.96
19	21	0.0031	0.19	12.7	1.8	1	23	959	982	959	982	0.93
20	21	0.0016	0.097	13.6	0.4	1	23	988	1011	988	1011	0.98
21	21	2.1e-05	0.0013	19.5	1.4	1	23	1017	1039	1017	1039	0.98

Sequence Information

Coding Sequence: ATGGATTTTGCTGAAGTGACTGTGAAAGAGAGCCCCGGCCTTTGCCGGTGCTGTCTGTCTGAAGGATGCTACAAAGATCTTGGCTCGGAGTATTCATGGATGAATGATACTGAGGTGTATGCCGATATGCTTCTGGATTGCTTTGATATTGGCATCACCCAACATAATGATGGCCCCAACGGCCCGAAGCGCCTTATCTGCGAGGTGTGCATCACACGGCTGCGAGACGCCTGCAACTTCAAGAAGCAGGTTGTGGACTCGGAGAAGAAGTTCATCGATATGCTGGGCCGAGGAGATTTCCGGGGCCTGGAGAAACATACAGTGATATATCCGTTATACTCAAGCGAAGCCCCCATGAAGGCCGAAGCTATCGAAGAGGTGACCGTGAGGGAGGACTATGATGACTCGCATGTGGACTTCCTCGATGACAATGACTTTACTGATGATGAAGAATTGGTGAAGCCTGAACGGGCGTCAGTCTCCGCGCCCGTCCCTTCCACATCGTCCGCGCCCGTCAAACGCGGTCGGCCCAAGAAGAGTCAGGAAGAGGTGGTCGAGAAGAAGCCCAAGCTCAAGGGAAAGAAGATCGCTAAAGGTGGCCCACCGGTGACTGCTGAGGTTGCGAAACCCTCACAGGCCAGCCAAAACCGTAGCACAAAGAAAAATATCACCACCATTCTAGAACACTCCACTGTCATCCCATTCAGATGGAACCTGCAGTTTTACATGTGTTTCTACTGCCATCTGTATATACAGACATTTGACGCATTAAAAACACACATGGAAACTGAGCACGTCAACCCAAACATCAAACCAGTCGTCGCACTGATCAAAACAGATGAGAAAGTCAAGGTGGAAATCAGCACTATGGCTTGCAAGATATGCGAGCACAAGCCTGAAGACTGGAACGGTCTTATCGCCCATCTGAAAACCCATAACATGCTGGGGAACGATACAGAATTCGCTGTCATACCTTACAAACTAGCAGGGCAGTtcaaatgcgggacttgcagcgagaccttccaatactttgtcagtctaaaccaacatatgaacgctcattacggacagcacgtttgcgaagtttgtggGAAACTCTTCCTTAGCACGGAGAGATTAAAGTCCCATACGCTTTACCATCGGGCTAAGTACCCTTGTAATATGTGCACGGAGGTATTCGAAACGATTGTGAAGCGGAGCAATCATAAGGCAGAAGTCCATGATAAAATGAAAACTTATAAGTGCTTCTACTGCCCTGAATCGTTTCCGAGCTACGCGGGCAGGAACAAACATTTCAAAGCTGATCACGAAGTAGAAATTCCGGTGTATGAATGTCCGGTCTGTGCCACTCGACCCGTGCCTGAGGTGACCGACGATGCATCGAAAATATCCCCAATTCCTGTCACATGCATAAAACGCAATCGCTTGATAAAGATGAACACCATTACTATTCTACAATACTCAACTGTCGTACCTTTCAAATGGCATAGGCAATGCTACTTCTGTTACTATTGCAACGCCCCGCTTAACACATTCGATGCTCTCAAAATTCACGTGGAAACGGAACACAAAACCACCAGCATGAAATCGATCGGTATACTAATAAAAAAGAACGATAAGGTTAAAATTGACGTTGCGTCTATCAGCTGTAAGATTTGCCATTCCAATTGTAAGGATTTGGACGAACTAATAGGTCATTTGAAGGACACACACGGGAAAGTGTTCTACGACGAATTAGGCTATGGAGTCATGCCGTATAAGCATCGCGCGGATACCTGTCAGTGCGCGATATGCGATGAGACTTTCCAATACTATATTAAGCTTAATCAACACATGAACACGCACTTCGGACAACACGTTTGTGAAGTGTGCGGTAAATCGTTCCTCAGCACTAGACGGCTTAAGATCCACACTTTATCTCACGGCTCTGGGTTTCCTTGCAACCTCTGTTCAGAGACCTTTGACTCCTACGCTAAGAGAAAGAACCATTACGCTAAATCACATGACATGCCGAAGGTCCACAAGTGTTGCTATTGTTCCGAAACGTTTCCCAACTACGGCGCAAGGACACTGCATCACCGCTACTCTCACAACATTGACACTCCGATTTATAATTGTCCTGTTTGCGGTGGCAAACGCCCCGTACCCGTGAAGTCCCTCAAGGCACCGAGTCAGTCACTATCAGCCATAAAACGCAATCGCTTACTGAAGCGTAATGCCACTATTATCTTGCAAAACAGCACTGCCGTCCCGTTCAAATGGCACCGGCAGTTATACCTTTGCTTCTATTGCCACAAACCGTTTCAACTTTTCGACGATCTCAAAGAACACTCCAGAACCGAACACGAAAACACAAACGTGAAATCGTCTGTTTCGCTTCTTCGGAGAGACTGTAAAGTCAAAATAGATGTCGCGTCATGGCTGTGCAAGCTTTGCGACTTTGAGCCTACAAATGTAGACGATTTGGTTCACCATTTAAAGCTCGTTCACAATAAGATGTTCGAAGACGCTGAGGTTGGAGTGATACCGTACAAACATCGCGCTGACTCCTACGATTGCGCGATTTGTGACAAGCGCTTCGCGTACTTTATGAAGTTGAACCAGCACATGAATACTCATTTCGGGATGTATGTGTGCGATGCCTGCGGGAAGTATTACCTCAGCAGTGACAGGCTTCGCATCCACGCACTCCTGCACACAAACAGCGTGCGCTGCGATCATTGCCCGGAAAGTTTCCGCTCCCTATCCATTAAAAACTCGCACGTAAACAAAGTACACCAGTCAAAAGTCAAATGCTTGCACTGTTCGGAAACATTCTGTAACTACAGTCAGAGGAAGATGCATCTTAAGATTGCGCATGATGTGGGTTCGTTACACGCCTGTCCCGATTGCGGGAAAGTGTTCTCCTGCAATAGCAGAATGGAACAGCATTTGAAAGAAGTACACTATAAAGAGACGCATTTCAAGTGCTCCATGTGTGAGCAGCGGTTCTTTGCCAACTGGCAACTAGTGAAGCACGTCCGTGTGATTCACCTCGGTGGCAAAGAGCACGAGTGTGAAGTGTGTCTGAAATCTTTTGTTAGGTTGAGCACGCTTAATGAACATTTGAAAACGCATAGTGATGATAAGACTTCTTCTGATTAA
Protein Sequence: MDFAEVTVKESPGLCRCCLSEGCYKDLGSEYSWMNDTEVYADMLLDCFDIGITQHNDGPNGPKRLICEVCITRLRDACNFKKQVVDSEKKFIDMLGRGDFRGLEKHTVIYPLYSSEAPMKAEAIEEVTVREDYDDSHVDFLDDNDFTDDEELVKPERASVSAPVPSTSSAPVKRGRPKKSQEEVVEKKPKLKGKKIAKGGPPVTAEVAKPSQASQNRSTKKNITTILEHSTVIPFRWNLQFYMCFYCHLYIQTFDALKTHMETEHVNPNIKPVVALIKTDEKVKVEISTMACKICEHKPEDWNGLIAHLKTHNMLGNDTEFAVIPYKLAGQFKCGTCSETFQYFVSLNQHMNAHYGQHVCEVCGKLFLSTERLKSHTLYHRAKYPCNMCTEVFETIVKRSNHKAEVHDKMKTYKCFYCPESFPSYAGRNKHFKADHEVEIPVYECPVCATRPVPEVTDDASKISPIPVTCIKRNRLIKMNTITILQYSTVVPFKWHRQCYFCYYCNAPLNTFDALKIHVETEHKTTSMKSIGILIKKNDKVKIDVASISCKICHSNCKDLDELIGHLKDTHGKVFYDELGYGVMPYKHRADTCQCAICDETFQYYIKLNQHMNTHFGQHVCEVCGKSFLSTRRLKIHTLSHGSGFPCNLCSETFDSYAKRKNHYAKSHDMPKVHKCCYCSETFPNYGARTLHHRYSHNIDTPIYNCPVCGGKRPVPVKSLKAPSQSLSAIKRNRLLKRNATIILQNSTAVPFKWHRQLYLCFYCHKPFQLFDDLKEHSRTEHENTNVKSSVSLLRRDCKVKIDVASWLCKLCDFEPTNVDDLVHHLKLVHNKMFEDAEVGVIPYKHRADSYDCAICDKRFAYFMKLNQHMNTHFGMYVCDACGKYYLSSDRLRIHALLHTNSVRCDHCPESFRSLSIKNSHVNKVHQSKVKCLHCSETFCNYSQRKMHLKIAHDVGSLHACPDCGKVFSCNSRMEQHLKEVHYKETHFKCSMCEQRFFANWQLVKHVRVIHLGGKEHECEVCLKSFVRLSTLNEHLKTHSDDKTSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638932;
90% Identity: -
80% Identity: -