Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387917.1:23140018-23160652[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00057 0.035 15.0 3.4 1 23 241 263 241 263 0.98

2 11 0.011 0.68 10.9 9.8 1 23 269 291 269 291 0.96

3 11 7.1e-05 0.0044 17.8 4.1 1 23 297 319 297 319 0.99

4 11 0.00016 0.01 16.7 1.3 1 23 325 347 325 347 0.98

5 11 1e-05 0.00064 20.5 1.0 1 23 353 375 353 375 0.97

6 11 1.1e-05 0.00067 20.4 0.0 1 23 381 403 381 403 0.98

7 11 0.00012 0.0073 17.1 0.4 1 23 408 430 408 430 0.96

8 11 0.00091 0.056 14.3 0.2 3 21 438 456 437 460 0.90

9 11 5.8e-05 0.0036 18.1 0.4 1 23 585 607 585 607 0.97

10 11 0.00022 0.013 16.3 1.4 1 23 1039 1061 1039 1061 0.96

11 11 6.2e-05 0.0038 18.0 4.3 1 23 1071 1093 1071 1093 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00057	0.035	15.0	3.4	1	23	241	263	241	263	0.98
2	11	0.011	0.68	10.9	9.8	1	23	269	291	269	291	0.96
3	11	7.1e-05	0.0044	17.8	4.1	1	23	297	319	297	319	0.99
4	11	0.00016	0.01	16.7	1.3	1	23	325	347	325	347	0.98
5	11	1e-05	0.00064	20.5	1.0	1	23	353	375	353	375	0.97
6	11	1.1e-05	0.00067	20.4	0.0	1	23	381	403	381	403	0.98
7	11	0.00012	0.0073	17.1	0.4	1	23	408	430	408	430	0.96
8	11	0.00091	0.056	14.3	0.2	3	21	438	456	437	460	0.90
9	11	5.8e-05	0.0036	18.1	0.4	1	23	585	607	585	607	0.97
10	11	0.00022	0.013	16.3	1.4	1	23	1039	1061	1039	1061	0.96
11	11	6.2e-05	0.0038	18.0	4.3	1	23	1071	1093	1071	1093	0.97

Sequence Information

Coding Sequence: ATGTGTATGCCAACGCCTAACAATGTGTCTGGCTTTGGAGGATATTCCTGGTTTACCAGTACAGCTGACCTTACCAAGGGTGAGGTGGATACTCCAAGTAGCCTCAGCTATACCCTTGGAAGCAATGTCTCACCAGAAACTACCCTAACAGTAATGTCCCACAAGACACCCCAGGTCCAAGATAAAGTTGGTACAGTCTCCGTGGCAGTGTCCAACACCGGGGCGCAGGTCACGAGGGTTGTGGCAGGGGGCACTCCCGTCACAGCGAGAAGAGCCATGTTTGTCCTGAATGAGGCTCCACATACAATAAACCGAGTGACGCAACAGAATCAGACAGCTACAATTCATGCAACAAGTCTAGCATCAAAGCCGTTTATGACGCCTCTCGGACCCATCCAGCTCACAGTGGAAGAATGTAATGAAATCCTGATGAAACGGGCTCTCCAGGCACAAGGCATAGCCACCCCAGTTGTGGATACCTCACAGCTCAACCATACAATACTGAACGGCACTTTGAAGAGTATCACAGAGAATGTACAGCAAAATCAGCAGCAAGAGACTATTCAGACAACTACAGTGCAACATCATCTGTTGCACGCAAAGCAAGAACCTGGGACCACTAACAATTCACCTAAAACGGTGTATTCGCAGACAGAGCTGCTGTCAACCAACTCTGTGATGACGTCATCGCAGACGCCCGCCGCCGTCAAAGAGCGGCCGTATTCCTGCGACGAGTGCGGCAAGAGCTTTCTTCTGAAGCACCATCTTACTACGCACGCGCGGGTTCATACTGGTGAGCGTCCACACATGTGCGTTCACTGCGGCAAGTCTTTCGCGCACAAACACTGCCTCAACATGCACCTACTGCTGCACTCGAACAGCCGCCCCTACCAATGCGGGGAGTGCAAGAAAACCTTCACCCTGAAACACCATCTCGTCTCGCACGCCAGGGTGCACAGTCGTGACCGTCCATACGTGTGCAACGAGTGCGGTCGCGGCTTCCCTTTGAACCGGCACCTCGTCACGCACAGGAAGTATCATGCGGGGGAGAGACCCTACGTCTGTAACGATTGCGGAGAGAGCTTCGCGCAGAAGGAGCACCTAGTAATGCACAGTCGTTTCCACGGCTCTCTGTCTCCCTTCGTGTGTCCCGACTGCGGCGCAGCCTTCGCGCGCAAGTTCCAGCTCGTGAACCACGGCCGCGTGCACGGCCGCGTGCCCCACGCCTGCCCCGTCTGCGGGAAGGAGTTCCTGCAGAAGCGGACCCTCGTCGCACACATGAAAATACACACAGGCGAGGGCGTTGTCGCGTGCTTAGAATGCGGCGAAGCCTTCAAAGGCAAGAGCGATTTGACGCAACACTATAAAGCCACGCGGCATTGCTCATACGGCACCCCGGTACAGGCTATCcaacaagttgaacaacaacaaacgacacagcagcaacaacaacagcagcagcagcagcaacaacaacagcaacaacaacagcagcaacaacaacaacagcagcagcaacaacagcagcagcaacaAACAACAGTTATAAAATCGGACGATTTCAACATCAAACCACATATTGTACAGGTGTTCTGCAAGACGCAAGTGCAACAACAACTGCAACAAATGGCGCAACAACAACAACAGCAGCAACAACAAACAACTGTTATAAAGTCAGATGACTTTAAACCACAGATTGTGCAGGTGATTGGAGCGGACGGTCAGATAGTATCGGAGAAAACAACACCTGCGTACGCCTGTCCAGAATGCGGCTCATGTTTCAACACTAAGGAGGCGTTATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACGTCAGTATACTATATATATATCTCTGCACGTCCGGCTGCACGCGGGAGACCGCACGTGCGTCACCGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCCGGCCTGGTGACGCAGCATCATGCGCCCAACACCAGCACACATCAACATGTACAAATCATATCAAGTCCCAGTAATGCAGTGCATACGCAAGTTATTGCGACGAATCATCACGCAACTCCAAGACCGAAAATGCACTTCTGCGGCGAATGCGGTAAAGGATTTGCAGCGAAACACGGCCTATTGGCGCATCAGAGGAGGCACCCTGATGGTAGTTGTACGCTACGGACGCACGTGTGTGACCAGTGCGGCAAAGCCTTCTTCCAGAAGAACCATCTCATGTTGCATCAAAGACAGCACATGGATTTGTCTAGAAATAACTCGCAGCAACAACAGCAGCAACAGCAAGCCGCGCAGCAGCAAGCCGCGCAGCAGGCCGCGCAGCAAGCCGCGCAACAAGTCGTGCAACAAGTGCAGCAACAAGTGCAGCAAGTGCAAGTCCATCAGCAGACCACTATGGAGATGGAGCAGGATCATCAACAGCCTACGCATATTCAAGTGGTGAATCGATCAGGACAAGTGATCGGTAACCAAATAATAGTAGATGTCGGCGGCGTTGGTCGAAGATTAGTTGGCCCTCACGTGATCACCATGCCGAGAGATGGGAAGCATATAACGCATAAACTACAAGCACAGAGGCATCATACTACAAGTGGTGACGTGAAAGACCTAGGCGGCTTGGTGCTATCAGCCGGTCGGGGGACGGGCCTTATCAAGTACGAGATTTCTATCCCTCCGTCCAATTCAAACGTGCAAGTACAACAGCTTGACTGA
Protein Sequence: MCMPTPNNVSGFGGYSWFTSTADLTKGEVDTPSSLSYTLGSNVSPETTLTVMSHKTPQVQDKVGTVSVAVSNTGAQVTRVVAGGTPVTARRAMFVLNEAPHTINRVTQQNQTATIHATSLASKPFMTPLGPIQLTVEECNEILMKRALQAQGIATPVVDTSQLNHTILNGTLKSITENVQQNQQQETIQTTTVQHHLLHAKQEPGTTNNSPKTVYSQTELLSTNSVMTSSQTPAAVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHMCVHCGKSFAHKHCLNMHLLLHSNSRPYQCGECKKTFTLKHHLVSHARVHSRDRPYVCNECGRGFPLNRHLVTHRKYHAGERPYVCNDCGESFAQKEHLVMHSRFHGSLSPFVCPDCGAAFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGVVACLECGEAFKGKSDLTQHYKATRHCSYGTPVQAIQQVEQQQTTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTVIKSDDFNIKPHIVQVFCKTQVQQQLQQMAQQQQQQQQQTTVIKSDDFKPQIVQVIGADGQIVSEKTTPAYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTRQYTIYISLHVRLHAGDRTCVTDLCALTAALQPGLVTQHHAPNTSTHQHVQIISSPSNAVHTQVIATNHHATPRPKMHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLSRNNSQQQQQQQQAAQQQAAQQAAQQAAQQVVQQVQQQVQQVQVHQQTTMEMEQDHQQPTHIQVVNRSGQVIGNQIIVDVGGVGRRLVGPHVITMPRDGKHITHKLQAQRHHTTSGDVKDLGGLVLSAGRGTGLIKYEISIPPSNSNVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -