Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387918.1:17129188-17130867[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.3e-06 0.0002 22.0 1.3 2 23 98 120 97 120 0.95

2 14 5.9e-05 0.0036 18.1 2.5 2 23 127 149 126 149 0.96

3 14 0.012 0.71 10.9 2.7 2 23 156 178 155 178 0.93

4 14 0.00015 0.0091 16.8 2.0 2 23 186 208 185 208 0.96

5 14 2e-05 0.0012 19.5 0.2 2 23 215 237 214 237 0.95

6 14 0.071 4.3 8.4 4.0 1 23 244 267 244 267 0.96

7 14 0.00011 0.007 17.2 1.7 2 23 274 296 274 296 0.96

8 14 2.5e-05 0.0015 19.3 2.1 1 23 309 331 309 331 0.97

9 14 4.9e-06 0.0003 21.5 0.6 3 23 348 369 346 369 0.94

10 14 6.5e-05 0.004 17.9 1.8 2 23 375 397 375 397 0.97

11 14 0.02 1.2 10.1 3.2 2 23 405 427 404 427 0.94

12 14 5.3e-06 0.00032 21.4 2.9 1 23 432 454 432 454 0.98

13 14 0.00054 0.033 15.0 1.3 1 23 460 483 460 483 0.95

14 14 0.0086 0.53 11.3 0.2 5 20 519 534 516 536 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.3e-06	0.0002	22.0	1.3	2	23	98	120	97	120	0.95
2	14	5.9e-05	0.0036	18.1	2.5	2	23	127	149	126	149	0.96
3	14	0.012	0.71	10.9	2.7	2	23	156	178	155	178	0.93
4	14	0.00015	0.0091	16.8	2.0	2	23	186	208	185	208	0.96
5	14	2e-05	0.0012	19.5	0.2	2	23	215	237	214	237	0.95
6	14	0.071	4.3	8.4	4.0	1	23	244	267	244	267	0.96
7	14	0.00011	0.007	17.2	1.7	2	23	274	296	274	296	0.96
8	14	2.5e-05	0.0015	19.3	2.1	1	23	309	331	309	331	0.97
9	14	4.9e-06	0.0003	21.5	0.6	3	23	348	369	346	369	0.94
10	14	6.5e-05	0.004	17.9	1.8	2	23	375	397	375	397	0.97
11	14	0.02	1.2	10.1	3.2	2	23	405	427	404	427	0.94
12	14	5.3e-06	0.00032	21.4	2.9	1	23	432	454	432	454	0.98
13	14	0.00054	0.033	15.0	1.3	1	23	460	483	460	483	0.95
14	14	0.0086	0.53	11.3	0.2	5	20	519	534	516	536	0.90

Sequence Information

Coding Sequence: ATGGAACAAGTCTTCATAAAAATAGAAGTCAAGCATGAGGATGCAAGTGAAGATGAAATCAAACCAGATTCAAATCCCAAAGGATCTGCAACTGATTGCCCCTTACTTGAAAGTAACTTAATCAAAAATAATAGTGAACCGGCAACCAGTGTTTATAAAACAAATGTTAGCATCCCTGAAGAAGAAACAAACAGCAATGAATCCCTCACTCCTACCTTTTCTGAATTAATGCCTACCGAAGAATTTAAAATGAACGGAAATGTATATGAAAATGGTAAAATAAACCGGATCTCCTGTAGCCAATGTGAGAAAACATTTAAAAACAGAGCTAATCTGAAGAACCATTTAAAATATGTGCATTCTGGGGACCAAAATATTGAATGCACACAGTGCTTTCGTACTTTCAAATCTCAAGTACATCTACGGTCACATTTGAACTCTGTGCATGCTGTACCCGATGAAGTGAGTTGCGATACTTGTCATAAAGTATTCCTCAGCCAGAAGAAACTCAAGAACCACATCTATTACACTCACCCGCAGCCAAACGAACAAGTCAAATGTACTGTATGTTTAAAAATATACAAATCCCACTATAATCTAAAAATTCACATGAAGCAAGTTCACCCGGAGGGTCAGTCTGTGCCATGTCCATACTGCGATAAGACCTTCAAAGTTGATATGTTGCTACAAAGACATATAAAATGGACCCACCCTAATGATGGAATGGTCTACAAATGCCAACAGTGTTACAAAGTTCTATCATCTATCACTTGTTATAAAAAACATATTGAAAACACTCATAATGTTTCAGCACGAGCTACTTGTGAACTTTGCAATCGGATCTTTAAGACAAAAAAATCTCTAGATCGGCATCTTAAGAATGTTCATAATGGAAAAGTGGTCAAACCTTATGTCCCTAGCCAATTTATCTGTTCATACTGTGACAGGAGTTTTGAAAACAATACAACCTTGTTTTGGCATAAACAAAAGCACCAACTGGAGGGCGCAACCGCTAGCGACCCTGACAATTCTAATACCCACTGCGAGATTTGTGACAAAACTTACTCCGACAACGCGTCGTTACAACGCCATTTGGCGTCAGTACACTCGTTGGAAACAGCTACTTGTCACATCTGCATGAAAGAGTTCAAATCTGCCATCAACCTGCAAAGTCACATGAGGATTACCCACGCACCGCCAGAGGCCACTCAGACTTGTGATATTTGTAAGAAGACGTTTAAGTGCGCCCTTCACTTGCGAATGCATATCAACGCTGTGCATACTGTAGGAGAATTCAACTGCGATGAATGCAACAAAACGTTTACTTCCCTCAAGTATCTAGCAAAGCACAAGAAAACGCACGTACAAACCAGAGAGCATCCTTGCGATCTTTGCGGGAAAATGTTCAAGAGTCTATTTGCAGCTAACAAACATAAGCGGAACGTTCATGGAGGCGTTAAATGCAGCTTCTGCCATATTAAACAAGCAAAGCTAGATGAGCATCTACTGAAGTGTCCTAAACGAAAAACTGTGGTACTAGATTCCATCTGTATAAAATGCAATCGCACGTTTAAGAGTAACACAGAACTGCAGGAGCATTTGGTAAGCTGTGGCTTTGAGGGTATTGACCCTATTGTTAAAATTGAAGAAATTGATCCAGACTATAAAATGGAAACCTAA
Protein Sequence: MEQVFIKIEVKHEDASEDEIKPDSNPKGSATDCPLLESNLIKNNSEPATSVYKTNVSIPEEETNSNESLTPTFSELMPTEEFKMNGNVYENGKINRISCSQCEKTFKNRANLKNHLKYVHSGDQNIECTQCFRTFKSQVHLRSHLNSVHAVPDEVSCDTCHKVFLSQKKLKNHIYYTHPQPNEQVKCTVCLKIYKSHYNLKIHMKQVHPEGQSVPCPYCDKTFKVDMLLQRHIKWTHPNDGMVYKCQQCYKVLSSITCYKKHIENTHNVSARATCELCNRIFKTKKSLDRHLKNVHNGKVVKPYVPSQFICSYCDRSFENNTTLFWHKQKHQLEGATASDPDNSNTHCEICDKTYSDNASLQRHLASVHSLETATCHICMKEFKSAINLQSHMRITHAPPEATQTCDICKKTFKCALHLRMHINAVHTVGEFNCDECNKTFTSLKYLAKHKKTHVQTREHPCDLCGKMFKSLFAANKHKRNVHGGVKCSFCHIKQAKLDEHLLKCPKRKTVVLDSICIKCNRTFKSNTELQEHLVSCGFEGIDPIVKIEEIDPDYKMET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01219979;
90% Identity: -
80% Identity: -