Basic Information

Insect: Thera obeliscata
Gene Symbol: ZNF579
Assembly: GCA_947578465.1
Location: OX387918.1:12625199-12629163[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00062 0.038 14.9 0.2 3 23 201 221 200 221 0.97

2 14 0.00022 0.013 16.3 0.6 1 23 227 249 227 250 0.95

3 14 0.00049 0.03 15.2 4.5 1 21 256 276 256 281 0.93

4 14 0.034 2.1 9.4 4.5 1 23 288 310 288 310 0.98

5 14 3e-05 0.0018 19.0 0.7 3 23 318 339 316 339 0.93

6 14 0.00045 0.027 15.3 4.6 1 23 345 367 345 367 0.97

7 14 1.2e-05 0.00075 20.2 1.1 1 23 373 395 373 395 0.97

8 14 1e-05 0.00063 20.5 4.9 1 23 409 431 409 431 0.98

9 14 3.2e-07 1.9e-05 25.2 3.8 1 23 437 459 437 459 0.98

10 14 0.025 1.5 9.8 1.2 1 23 465 487 465 487 0.88

11 14 0.00068 0.042 14.7 2.0 1 23 493 516 493 516 0.97

12 14 7e-08 4.3e-06 27.3 0.8 1 23 522 544 522 544 0.97

13 14 0.00019 0.012 16.5 2.6 1 23 550 572 550 572 0.95

14 14 0.0058 0.35 11.8 0.6 1 21 578 598 578 599 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00062	0.038	14.9	0.2	3	23	201	221	200	221	0.97
2	14	0.00022	0.013	16.3	0.6	1	23	227	249	227	250	0.95
3	14	0.00049	0.03	15.2	4.5	1	21	256	276	256	281	0.93
4	14	0.034	2.1	9.4	4.5	1	23	288	310	288	310	0.98
5	14	3e-05	0.0018	19.0	0.7	3	23	318	339	316	339	0.93
6	14	0.00045	0.027	15.3	4.6	1	23	345	367	345	367	0.97
7	14	1.2e-05	0.00075	20.2	1.1	1	23	373	395	373	395	0.97
8	14	1e-05	0.00063	20.5	4.9	1	23	409	431	409	431	0.98
9	14	3.2e-07	1.9e-05	25.2	3.8	1	23	437	459	437	459	0.98
10	14	0.025	1.5	9.8	1.2	1	23	465	487	465	487	0.88
11	14	0.00068	0.042	14.7	2.0	1	23	493	516	493	516	0.97
12	14	7e-08	4.3e-06	27.3	0.8	1	23	522	544	522	544	0.97
13	14	0.00019	0.012	16.5	2.6	1	23	550	572	550	572	0.95
14	14	0.0058	0.35	11.8	0.6	1	21	578	598	578	599	0.93

Sequence Information

Coding Sequence: ATGTCTACTCCAGCAGTGTGCAGAGTTTGTCTCTGCAGCGGAGTGCGTGTGTATGTTATTGAAGAGACTCACCTGCTGGAGTTCTACGAGAAACTCACGAACACAAAGCTAACCGAAGATGGATGGCCACATACCCTCTGCTACATCTGTTTTTCACAGCTACGGCACTGCGATCGGTTCGCCGACGTGGCGCACAAAGCTGAGAACTTCCTCAAAGATCTACTGAAAAATGGCACTGAGGTAACCCACGAGACAGTTGCTGCACTACAGATAGGTATAGCACAGAACATGTCTCTTACCAATTTAAAATCTACCTACTTTAATGGCTACTCCATAGATGGAAGCACTCTGATGATGTGTGAAGTTGCGGCGAAAGTTGAAAAAACCTCAGAAGATTCACCTAAATTAGAAAACCGATTGTCTGAAGATGATTTACTTACTGAAATTAAAAAAGAAGACATAACAAGCACACATGCAGCAAGCAACTGTTCTGATGTATGCAATGGAACATCTATGACTAAAAAAGAACTGCCTAACCTTCTCGTAACTCCTATAAGTGCTGAAAATCACATAAAGAGTGAAAAAAAAGGAGACACCCTATGTACAGTGTGCAATAAAATCTTCTCCAAACCAAATGCATTAAAGCTACACGAAAGTGTCCATACTGGTGCCAAACCTTTCATCTGCAACCAATGTGGTGGTGCATTCAGACTCAAACAAAGCCTACAAAACCATATAATAGTCCACCATTCAGGAGAAAGGAGGTTTGTTTGTGATGTGTGCAATAAATCCTTCTTTCACAAGAATCAATTGACGGCACATAAGCAGTCCCCCAAATGCCACAGTCCCACATACAAGCCATACACTTGCAGGAAATGTCACCTCGCTTTTATGGAACTCGATGCCCTTAAGCAACACAAGCATACACATATCGGAGAAAGGAGGTTCGGCTGCAACCAATGTGATAAAATATTTACAGATAACAAGTCCTTAACTAGACATGTCAGCCAAGTACATTGCACAGAAACTTCCTATGCCTGCCACAGATGCAGTAGACAATTTAAAAAATTAAGTTCATTAACAATTCACATGAAATTCCATACAAGAGAACATTTGTATGCATGCAAAACATGTGGACTAAAGTTCATATACAATTCGTCTCTCAGAAGACATGCTCAGCGACACGCACCTGGTCAAGTGATCACCCCATCTGACGAGTGGCCGTACTGCTGCGACCGATGTAGCAAGAAATTCAAGTCAAGATCTGGTCTCAAAGCACATCTCAGGACGCACACTGGAGAGCAACCATACTGCTGTGATAAATGTGGCAAAAGATTCAACCAAAAAGGAAACTTGAAACTGCATATGAAAATCCACTTCGGAGAGAAGTTGTTTGCCTGTGAAATATGCGGGAAAACATTCCTCTTAAAGTGTCAGCTTAAACTTCATAGTGTAGTTCACTCGGGCGACAAACCTTATGCATGTAGTAGATGCGAGATGAGATTTACTTTTCAAAGCGCTTACAAACAGCACCTTAAAAGGCTACACACGGAAGTTAAAGCATTTGCATGTAGCAAATGTGGAAAGTCATTTGATCAAGAGTCCAATCTAACCCTCCATATAAGAAGACATGCAGCAGAGCCGATCCACGCCTGCCAAAAGTGCTCCAAGAGATACAAAACAGCGGACAAGTTAAAACAACATCAGGCAATCCACTCTGATGAAACTCCCTACGCTTGTGACAGATGCAACAAGGCGTTCAAGATATTGAAGTACTTGCGGCAACACAAGATGTCTGCGAGATGTCGCGCCAACGAGGCCAATGCAGTGCTGTCACATTTGACCAAAATTCACGAGTGA
Protein Sequence: MSTPAVCRVCLCSGVRVYVIEETHLLEFYEKLTNTKLTEDGWPHTLCYICFSQLRHCDRFADVAHKAENFLKDLLKNGTEVTHETVAALQIGIAQNMSLTNLKSTYFNGYSIDGSTLMMCEVAAKVEKTSEDSPKLENRLSEDDLLTEIKKEDITSTHAASNCSDVCNGTSMTKKELPNLLVTPISAENHIKSEKKGDTLCTVCNKIFSKPNALKLHESVHTGAKPFICNQCGGAFRLKQSLQNHIIVHHSGERRFVCDVCNKSFFHKNQLTAHKQSPKCHSPTYKPYTCRKCHLAFMELDALKQHKHTHIGERRFGCNQCDKIFTDNKSLTRHVSQVHCTETSYACHRCSRQFKKLSSLTIHMKFHTREHLYACKTCGLKFIYNSSLRRHAQRHAPGQVITPSDEWPYCCDRCSKKFKSRSGLKAHLRTHTGEQPYCCDKCGKRFNQKGNLKLHMKIHFGEKLFACEICGKTFLLKCQLKLHSVVHSGDKPYACSRCEMRFTFQSAYKQHLKRLHTEVKAFACSKCGKSFDQESNLTLHIRRHAAEPIHACQKCSKRYKTADKLKQHQAIHSDETPYACDRCNKAFKILKYLRQHKMSARCRANEANAVLSHLTKIHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -