Basic Information

Insect: Thera obeliscata
Gene Symbol: Znf335
Assembly: GCA_947578465.1
Location: OX387918.1:12595899-12597332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00014 0.0088 16.9 5.4 1 23 52 74 52 74 0.97

2 14 0.00027 0.017 16.0 7.0 1 22 80 101 80 101 0.94

3 14 0.00028 0.017 15.9 3.4 1 23 120 142 120 142 0.96

4 14 3.9e-05 0.0024 18.7 0.2 1 21 148 168 148 169 0.96

5 14 1.2e-05 0.00076 20.2 0.2 1 23 180 202 180 202 0.96

6 14 3.5e-06 0.00022 21.9 2.0 1 21 208 228 208 229 0.96

7 14 2.3 1.4e+02 3.7 3.5 2 23 238 260 237 260 0.95

8 14 0.031 1.9 9.5 5.2 1 23 266 288 266 288 0.97

9 14 3.3e-05 0.0021 18.8 0.5 1 23 294 316 294 316 0.97

10 14 0.00021 0.013 16.4 1.8 1 23 322 344 322 344 0.97

11 14 1.4e-07 8.6e-06 26.3 1.7 1 23 350 373 350 373 0.98

12 14 1.9e-05 0.0012 19.6 1.4 1 23 379 401 379 401 0.98

13 14 4.8e-05 0.003 18.3 0.6 1 23 407 429 407 429 0.98

14 14 0.025 1.6 9.8 0.2 1 21 435 455 435 456 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00014	0.0088	16.9	5.4	1	23	52	74	52	74	0.97
2	14	0.00027	0.017	16.0	7.0	1	22	80	101	80	101	0.94
3	14	0.00028	0.017	15.9	3.4	1	23	120	142	120	142	0.96
4	14	3.9e-05	0.0024	18.7	0.2	1	21	148	168	148	169	0.96
5	14	1.2e-05	0.00076	20.2	0.2	1	23	180	202	180	202	0.96
6	14	3.5e-06	0.00022	21.9	2.0	1	21	208	228	208	229	0.96
7	14	2.3	1.4e+02	3.7	3.5	2	23	238	260	237	260	0.95
8	14	0.031	1.9	9.5	5.2	1	23	266	288	266	288	0.97
9	14	3.3e-05	0.0021	18.8	0.5	1	23	294	316	294	316	0.97
10	14	0.00021	0.013	16.4	1.8	1	23	322	344	322	344	0.97
11	14	1.4e-07	8.6e-06	26.3	1.7	1	23	350	373	350	373	0.98
12	14	1.9e-05	0.0012	19.6	1.4	1	23	379	401	379	401	0.98
13	14	4.8e-05	0.003	18.3	0.6	1	23	407	429	407	429	0.98
14	14	0.025	1.6	9.8	0.2	1	21	435	455	435	456	0.90

Sequence Information

Coding Sequence: ATGCATGATGCTCCAGTAATATTTAAGTTGGAAAACATCAAAGAAGAAACAAAATGCGAAGATGATTCTGTTAAAACTGAGATGATGTGCAGTGAGGATGTGGACAGAAAAGAGATCCTATTTAAAAGTGAAGCAACCAAACAGAGAACTCATTTCTGCTGTGACGTTTGTTCAAAAATGTTTACAACAAGGCATCTGCTAAAGTCGCACTTAATAAGTCATTCCAGGGAAAAGCCGCATCACTGTAAATATTGCAACAAATCTTTCTCCAGAAAACACAACATGGTGCAACACACCAAAACTTGTACTAGAGAAAAGATCAAGTGGGAATCGCCAGATCCAGATGATGGACGGTCTTTCTATTGCTGTGTGTGTAGCAAAAAGTTTGCTTCGAAATCTCTTCTGAAATCTCATACAGTTATCCACAGTGGAGAGAAGCCATTTAAATGTGAGGGGTGTAAGAAACCCTTTGCTAGAAAGCAAGGCATGAAGCAACACATGCTAGTTTGCACAGAGGTTAAACCATATATACCGATGTACCTCTGCCCCTACTGCACCAAAACGTTTGATAGTGACAGCGATCTGAGTGACCACATCATAACGCACTCGACAGAAAAGCCTTACACTTGTGATAAATGTCACAAATCGTACACAACGAAACCAAACTTGCGTCAGCATTTGAAGATTTGCTTTCTCGAGAACGAGGTAGTGACTTGCTCTCTTTGCCCCGACACGTTCATTTGCAGAAACGATCTGTGCAAGCACTTGAACTCTTCGCATTCCGCACAGAAGCCGTTCTGCTGTGACAGGTGCAGCGCTAAGTTCTGGTATAAGAGCCACTTGAAGGTGCATCTCAGGATCCATACGGGAGAAAAACCTTTCGCGTGCGAAGTCTGCGGTAAAACTTTCACGCTAGGAAACCATCTGAAAGCACATCTAGGGACCCACACGGGGGATAAACCGCATTCTTGCCAAGTTTGCGGCAAAGCGTTCCTCGCTCGCTTCAATTTGAGAGAGCACATGCGCCGTCACACGGGCGAGCGGCCTTACAGCTGCGACACGTGCGGGAAAGCTTTCGCCCACCAGAGCACTCTCCGCCAGCATCTGCGCAGAGTGCACACTCAGGCTAAACCGTTCTCTTGCACTCGCTGCTCCTTCTCGTTCGCGCATGAGAGTGCATTAAGCGCACACATGCGCGTTCACACGGCGGAGAGACCTTACGCATGTGATGTTTGCAATAAGACATTTATCGAAGTGCGCCATTTAAAAGGGCACATGCAAGTTCATTCCGATGAGAGGCCGCATGCATGTGCGGCGTGCGGGAGCGCGTACAAGCGCGCCGAGCATCTGCGGCAGCACGTCAACTCCAAATGCAAGGCTCCACGAGCTGCTGCCTCTGCTCCTTTCATGTACAAACAAAATATACAAATCTAA
Protein Sequence: MHDAPVIFKLENIKEETKCEDDSVKTEMMCSEDVDRKEILFKSEATKQRTHFCCDVCSKMFTTRHLLKSHLISHSREKPHHCKYCNKSFSRKHNMVQHTKTCTREKIKWESPDPDDGRSFYCCVCSKKFASKSLLKSHTVIHSGEKPFKCEGCKKPFARKQGMKQHMLVCTEVKPYIPMYLCPYCTKTFDSDSDLSDHIITHSTEKPYTCDKCHKSYTTKPNLRQHLKICFLENEVVTCSLCPDTFICRNDLCKHLNSSHSAQKPFCCDRCSAKFWYKSHLKVHLRIHTGEKPFACEVCGKTFTLGNHLKAHLGTHTGDKPHSCQVCGKAFLARFNLREHMRRHTGERPYSCDTCGKAFAHQSTLRQHLRRVHTQAKPFSCTRCSFSFAHESALSAHMRVHTAERPYACDVCNKTFIEVRHLKGHMQVHSDERPHACAACGSAYKRAEHLRQHVNSKCKAPRAAASAPFMYKQNIQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -