Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387918.1:15580359-15591168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.012 0.76 10.8 0.9 2 23 232 253 232 253 0.98

2 19 0.00016 0.0096 16.7 1.9 1 23 259 282 259 282 0.96

3 19 1.4e-07 8.8e-06 26.3 2.7 1 23 286 308 286 308 0.99

4 19 1.6e-05 0.00098 19.9 1.0 1 23 314 337 314 337 0.95

5 19 1.9e-05 0.0012 19.6 1.5 1 21 371 391 371 392 0.95

6 19 0.00011 0.0065 17.3 0.8 1 19 400 418 400 420 0.96

7 19 0.0024 0.15 13.0 0.7 1 23 428 450 428 450 0.97

8 19 0.00017 0.011 16.6 0.1 1 23 456 478 456 478 0.96

9 19 0.00011 0.007 17.2 0.1 1 23 484 506 484 506 0.98

10 19 0.033 2 9.4 0.5 1 20 512 531 512 533 0.95

11 19 0.0098 0.6 11.1 0.4 1 23 543 565 543 565 0.97

12 19 0.0054 0.33 11.9 0.9 1 21 571 591 571 592 0.96

13 19 0.0024 0.15 13.0 0.9 1 23 794 816 794 816 0.98

14 19 7.7e-05 0.0047 17.7 1.5 2 23 846 867 845 867 0.96

15 19 4.1e-07 2.5e-05 24.8 1.0 1 23 873 895 873 895 0.98

16 19 9.5e-07 5.9e-05 23.7 0.6 1 23 901 923 901 923 0.97

17 19 0.00085 0.052 14.4 0.8 2 23 952 973 951 973 0.96

18 19 0.00066 0.04 14.8 2.7 1 23 979 1002 979 1002 0.96

19 19 0.0013 0.081 13.8 1.0 1 23 1008 1030 1008 1030 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.012	0.76	10.8	0.9	2	23	232	253	232	253	0.98
2	19	0.00016	0.0096	16.7	1.9	1	23	259	282	259	282	0.96
3	19	1.4e-07	8.8e-06	26.3	2.7	1	23	286	308	286	308	0.99
4	19	1.6e-05	0.00098	19.9	1.0	1	23	314	337	314	337	0.95
5	19	1.9e-05	0.0012	19.6	1.5	1	21	371	391	371	392	0.95
6	19	0.00011	0.0065	17.3	0.8	1	19	400	418	400	420	0.96
7	19	0.0024	0.15	13.0	0.7	1	23	428	450	428	450	0.97
8	19	0.00017	0.011	16.6	0.1	1	23	456	478	456	478	0.96
9	19	0.00011	0.007	17.2	0.1	1	23	484	506	484	506	0.98
10	19	0.033	2	9.4	0.5	1	20	512	531	512	533	0.95
11	19	0.0098	0.6	11.1	0.4	1	23	543	565	543	565	0.97
12	19	0.0054	0.33	11.9	0.9	1	21	571	591	571	592	0.96
13	19	0.0024	0.15	13.0	0.9	1	23	794	816	794	816	0.98
14	19	7.7e-05	0.0047	17.7	1.5	2	23	846	867	845	867	0.96
15	19	4.1e-07	2.5e-05	24.8	1.0	1	23	873	895	873	895	0.98
16	19	9.5e-07	5.9e-05	23.7	0.6	1	23	901	923	901	923	0.97
17	19	0.00085	0.052	14.4	0.8	2	23	952	973	951	973	0.96
18	19	0.00066	0.04	14.8	2.7	1	23	979	1002	979	1002	0.96
19	19	0.0013	0.081	13.8	1.0	1	23	1008	1030	1008	1030	0.98

Sequence Information

Coding Sequence: ATGTCCCATTCAGTGTGTAGGATATGCCTAATTGGTAATTCTAAAACTGTTTCTATTCAAAACACCCAACTTGAAGTGATTTATGAAAGACTTGTGGGTTTTAAGATTACCCCAAATATGGTTGCTGTGCTGAACAAAGAGATGCAGAAAAACTTCTGTACATCTCCCGTTGAATCAGTTTCATTCAGCTGTTTGCAAACAGACACATCAACTGGTGTAAAAGAAGAGCTAATTGATGTTAAAACTGAAATAAAGTCTGTCAAAGAGGAAACTGAAGTGTTATCTCCCAATGTGTCATGTAAAGTATGCCTTGCGTGTGATGTCAAAAGCTTCTCCATAAATATCAAACCACTTCAAGAAATATTTGAAAAGCTCACAAATACAAAGCTAACACAAAGCGTAGTTGCAATGCTCAATGTTAAAACTGAACCTATCTACTCAAGCACCCCTGTCAAGTATGAATCTTACTATGATATAGATGAGGAGATAGTAGAAATCGTGGTAAAGGAAGAATTATTACAAGTGGACTACGAGTATACAGTTGAAGTTGAAGATGATGATACGAAAGATACGTGTGCACTAAATGAAATAAGCGTTGTGAAGATGGACCCCGACCAAGACACAAAATCAACAAAAGCTTTAATTAACTCCAATAGCCAGGACAACAAATTAGTTCACGTTGTGCTGAACGAACAATGTGATGTGTGCGATTTCAAATCCAAATCTCTTAGTGGCATGAAGAATCATTTGCGTTTGCACGATCCAAAGCGAAAGTATTCATGTGGAACATGCTCATACCGGTTCAGCAGATCCAGAAATTTAAGGCTCCATGTAAAATATGTTCATAGTAAAAACTACCGGTGTGGTAAATGCGATGAAACGTTTCCGCGAAAAAGTCATTTGAAAATGCACATGCGGATTCACTCTGCTGAAAATGTATTCCCCTGTGAGAAATGTAGCAAGATATTTAAAGATTCGAAAAACCTTAGAAGTCATTATAGTATTGTCCACCCCGGAGAGAGGTATCATTGCGAGCGGTGCCAGTTCACTTCCCCCAGCTTGAAATGCTTGCACGATCATATCGTGAAAGTACACGCAGAGAGTCGGCGCTATATCTGTGATAAATGTCACAAAACTTTTGCAGGAAAATCAAGTTTGAAGAAGCATCTAAAACTATGCCAATCTGCCATAAGACAACACGAATGCAAAATATGCCCCAAGACTTTTAGCACCCGTCAACTTTTAAGGGTACATAATACGTGTCATGATATAGAAAAGCCATTTACATGCGATATATGCAACTTAAGTTACAGAGAAAGGACAGGTCTGAAAGTACATTCGCTAAAACACACTGCAGTCAAATCGTTTGCATGCAGCGTTTGCGGAGCAGAGTTTTATCGCAAAGATGTTCTCAACAAACATATGGTCGTCCACACTGGAGAAAAAATTTACGCATGTGGAATTTGCGATTTAACATTTGTTAGTAACGCATACGCTAAGAAGCACATGGAAACCCATTCAAAAGTAAAACCGTACACCTGTGATCTATGCCTCGGAAAGTTTAAAAGTCGGGCCTCTTTGAGAATTCATATACATAACACAACAGTACACGGCGCTGCTAAAAAGTTCGCATGCAACTTTTGTGAAAAACCATTCGATATGTTGATCAGATTGAACAGTCATATCCGACAACACACGGGTGAAAAGCAATTTTCATGTGAATTTTGTGAGAAAACTTACGTCGAGAGAAGAGATCTACTGCACCACTTGAGACTTAGCACAAAAGATGGGAAGCCTGAGACAATCTGCTATTTGTGCAGCTCGATGTTGCAGAAATTCAGTAAATTCTTCGATGTGGTGCAGAAATCTGAGCGAATCCTCACATTACGGCTTCTTGGTGGTATTGAGATGTCACAAAAGACACAAGATGACCTGAAATTGTACAACTTAGCAACAACTTCTATAAAATCCGCATCTTATGTTGACAATGGGGAAGACATTGAGCCCGAAGTCACAGTGACTATTAAAGAAGAACCCATTGATTTTGAAGAGAGTGAGGAGTATAAAGAGGAATATTTAGACTCACCACCTGCAGATGAAATATCAAATGATGTTGATAGAACTATGGAAACCATTTCTACTCCAGCATCTCATGTTCAAGGGAGACCATTGGAATCTGATAATTTGTCTAACATTTTTAACGTGGAGTTCATTCAAAATGATGTTCCTATAAAAAAAGAAGTTACTGACTCTGAAGAGGATAACTCTGCCATTACCCAATCAATTCTGCGAAATTTAGGCATAGCTCTCGAAAACTTACCAGAACTAGAACTAAAATACTGCCCTAAACTTACTAAAACTGAGAACCATGAGAAACGTTACTACTGCAATATGTGCAGCTACAAGTCACGAACGTCTGGGGCATTAAGAAATCATGGCAAAGTACACAATCTGAATAACACATTTGTGTGTGAATTTTGCGCGTACCGGTTCCTAGACGATAAAAAACTCGAATATCATAGGAACTACTGCACTGTATGTAGTATCTGTGGCAAGAGGTTTTCCAAAATACATGGTTTGAGGACACATGTGAGACTCCACACCGGGATCCAGCCGTATTCCTGTGACAGTTGCGGCAGAGGATTTAACCAGAAAACCAACTTGCAGACACATATGAGAGTCCACTCTAGACAAAACCAGTACCCTTGTCAAATTTGCGGAAAAACATTTCCCTTCAAAACATACTTAGAACGGCACATGTCCCTTCACGGGGAAGTTCCGCTGGATACTGAAAGTTTCCGTCGTACCATGAACTGTCATAAACTTCACGTCAGGAAGATGAACAAGACTTGTGTTTGCAGCGTGTGTGGTAGGACACTGCAGAGTAAGATGGGACTGGAGGTGCATATGAGACAGCATACCGGCGAGCGGCCGTTCGCCTGCGAAAGTTGCCACCGGGTCTTCGTACAGAAATGCAATTTGCTGACGCATATAGAGAGAGTTCACAAAGGCGAGGAATGTTTCTCTTGCAGAGTTTGTTACAAAATGTTCCCGTTCAACTCGGAAATGATAAGCCATCTGTCTACGCACGACGAGATGTCGGCGCGGGATTTCGAAATGTTTCAGCAGAAGCACATATACACGATACATAGGAACGTCGGCCACAACGGCCAGCTAACGCCGTACGCTTGTGATATGTGTAAAACTAGGATACTGTCATATTGA
Protein Sequence: MSHSVCRICLIGNSKTVSIQNTQLEVIYERLVGFKITPNMVAVLNKEMQKNFCTSPVESVSFSCLQTDTSTGVKEELIDVKTEIKSVKEETEVLSPNVSCKVCLACDVKSFSINIKPLQEIFEKLTNTKLTQSVVAMLNVKTEPIYSSTPVKYESYYDIDEEIVEIVVKEELLQVDYEYTVEVEDDDTKDTCALNEISVVKMDPDQDTKSTKALINSNSQDNKLVHVVLNEQCDVCDFKSKSLSGMKNHLRLHDPKRKYSCGTCSYRFSRSRNLRLHVKYVHSKNYRCGKCDETFPRKSHLKMHMRIHSAENVFPCEKCSKIFKDSKNLRSHYSIVHPGERYHCERCQFTSPSLKCLHDHIVKVHAESRRYICDKCHKTFAGKSSLKKHLKLCQSAIRQHECKICPKTFSTRQLLRVHNTCHDIEKPFTCDICNLSYRERTGLKVHSLKHTAVKSFACSVCGAEFYRKDVLNKHMVVHTGEKIYACGICDLTFVSNAYAKKHMETHSKVKPYTCDLCLGKFKSRASLRIHIHNTTVHGAAKKFACNFCEKPFDMLIRLNSHIRQHTGEKQFSCEFCEKTYVERRDLLHHLRLSTKDGKPETICYLCSSMLQKFSKFFDVVQKSERILTLRLLGGIEMSQKTQDDLKLYNLATTSIKSASYVDNGEDIEPEVTVTIKEEPIDFEESEEYKEEYLDSPPADEISNDVDRTMETISTPASHVQGRPLESDNLSNIFNVEFIQNDVPIKKEVTDSEEDNSAITQSILRNLGIALENLPELELKYCPKLTKTENHEKRYYCNMCSYKSRTSGALRNHGKVHNLNNTFVCEFCAYRFLDDKKLEYHRNYCTVCSICGKRFSKIHGLRTHVRLHTGIQPYSCDSCGRGFNQKTNLQTHMRVHSRQNQYPCQICGKTFPFKTYLERHMSLHGEVPLDTESFRRTMNCHKLHVRKMNKTCVCSVCGRTLQSKMGLEVHMRQHTGERPFACESCHRVFVQKCNLLTHIERVHKGEECFSCRVCYKMFPFNSEMISHLSTHDEMSARDFEMFQQKHIYTIHRNVGHNGQLTPYACDMCKTRILSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -