Basic Information

Gene Symbol
-
Assembly
GCA_947578465.1
Location
OX387922.1:7103841-7113800[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-15 1.8e-11 44.7 0.0 16 89 74 143 56 143 0.84

Sequence Information

Coding Sequence
ATGGCCTACATTAAAAAAGTTCAAGAGCGGGCTGAAAAATACGGGATGTGCAAAATTGTTCCACCCAAAGACTTTAATATTCCTGTACATCTGGACGAAAGTGTGAAATTCTCTACTGTTTCTCAATATCTGGGACGCCTGTTCCATCGATGGGGACCGGTATCTAGAGAGCTGACCTTTATACTGACCTGTGCATCTATGCTTGCCAAAGTTAAGGACAGAGATCAGTTCGCCAAACCGCCATTGCTTGAAGGCACAGAGGTAGACTTGGTGAAGTTATATCACCTTGTCGTGGACGAAGGAGGAATCGCAGTCATGCTTGCTGGTGGTGGCGAAAAGTGGACGGATATCGTCAAGAAAATGGGATATGGGAGCATGGATTACAAGAAATTGGAAAAAATATACTTCAAATATGTGCTGCCATACGAGTCCTTGTCACAAAACGATCGCTCGAATTTTCAAAATAAGGTAGAGGAAGTTTGGGATATACGACATAAAAACGTGATTCATCGAGCAAATTATCCACTAAACGAAAAACGCAAGCTTTTCGGCGTGGAACAAGCTCAACGCAAAGAAGAAAAGCCTGCCCCTCATCTCGAAGACGTGTGGGTCGCTGGCAAGAGTGTCTTCGCCCGCATAGAGGAATGTGTCGGCAAGGGACGTCCTACCAATATTGAAAATTACCGCAAGATTTCCGAACGTACGCAAAAGATGCGGTATAAAAAGGGAGGGCGGCTGCGTTCTGTTGCCGAGATAGAAAGAAAATATTGGCGCATAGTGTCTTTGGGCTTGGAGCACAAAACCGTATTATCAGGTTTTATAGACACCTCGGTGAAAAACCTGGGCCACCCGGCGGCCCTCAATGACATTGGGGGCACCCATCCATGGAACTTAAAGCGCCTGACCGAAAACCCGGATAACGTCCTAAGCTCGCTAGGCAAGTCGCTCAGCGTGACCGAGCCTACACTTAGTCTAAACCAGCTCTTCAGCACCAACTGCTGGCATGTGGACCCACATCAGCTCACTTGGATTGACGTCTTACACGAGGGACCCACCAAGATATGGTACGGGATCGCAGCAAAAGACACAGTCCAGTTCCGTACCGCGATGAAAGAGCTCGAGCCGTCGGTGGTGCAGGAAAAGGGTATATGGCTTGCGTCTGACACAACCATGGTCCCGCCCAGCAAATTGTGCTACAACGGCGTGCAATTGCAACGCATCGAGCAGAACGTCGGCGAATACCTCATTGTATTTCCCGGTGCCTACGCGTCCTCCATCGCCACGGGACTTTCCATATCGGAGAGCGCTTATGTCGGCGACACTCGCTATATGGACAGAATCGATGCTACGTTCAGGCAAATGCGTATTGACAGCGAACCTACGATGTTCTCTAACACGATGCTTCTAATGCGCATGGCGACCAACCCGAATGTCAATCTAAACATCCTGTCGACTGTGCATGCATTGCTCTACAAGATATTTGAAGAAGAGGCGGATGGACGTCGCGAGGCTAAGAAGTTCAAATGCCCCATTGAATATATTCCAAAGGACAGCAAAGCTAAGCCGCAATGGCCAGTGTCGTGGCCTTACCAGGAAGAGTGCTTCATCTGTCAAGCCCCGCTCATACTGTCTAAGAGCGTACTGTACAAAAACACGCGGGAGTTGATGTGCCTAAAGCACGCGCTGCGCGTGTACAGTTGCGCTGCTGAAGAAACAAGAGGTCCACCGCCACCCGTCAAGTTGCTCTACTCGACGGAGGAACTAAAAACGCATATGGGAGAACTTCAGAAACGCCTTTTCGCCGTTGATGTGCTGGGCGTTTCAGGTGCTTCAACCAGCGAATCGTTCAGGCCAGAAGATTTAAATTTATCATCATCTGATTCTGAAGACGAGTAG
Protein Sequence
MAYIKKVQERAEKYGMCKIVPPKDFNIPVHLDESVKFSTVSQYLGRLFHRWGPVSRELTFILTCASMLAKVKDRDQFAKPPLLEGTEVDLVKLYHLVVDEGGIAVMLAGGGEKWTDIVKKMGYGSMDYKKLEKIYFKYVLPYESLSQNDRSNFQNKVEEVWDIRHKNVIHRANYPLNEKRKLFGVEQAQRKEEKPAPHLEDVWVAGKSVFARIEECVGKGRPTNIENYRKISERTQKMRYKKGGRLRSVAEIERKYWRIVSLGLEHKTVLSGFIDTSVKNLGHPAALNDIGGTHPWNLKRLTENPDNVLSSLGKSLSVTEPTLSLNQLFSTNCWHVDPHQLTWIDVLHEGPTKIWYGIAAKDTVQFRTAMKELEPSVVQEKGIWLASDTTMVPPSKLCYNGVQLQRIEQNVGEYLIVFPGAYASSIATGLSISESAYVGDTRYMDRIDATFRQMRIDSEPTMFSNTMLLMRMATNPNVNLNILSTVHALLYKIFEEEADGRREAKKFKCPIEYIPKDSKAKPQWPVSWPYQEECFICQAPLILSKSVLYKNTRELMCLKHALRVYSCAAEETRGPPPPVKLLYSTEELKTHMGELQKRLFAVDVLGVSGASTSESFRPEDLNLSSSDSEDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-