Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_947578465.1
Location
OX387915.1:21219609-21234766[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-30 1.2e-26 93.3 0.1 1 89 307 393 307 393 0.96

Sequence Information

Coding Sequence
ATGCTGAGTGCCCAAATTTCATCAGCTCATCGATCCTTAGCATCCTCTGTTAGCAAGTCAATGTCACGTCAGAAGCAGCAGGGAGATGATCCTCCCTACCTCCCAGTGGGAACTGATGTCAGTGCTAAGTACAAGGGTGCTTTCTGTGAAGCAAAGGTCAAGAAAGTTGTCAGgaatatcaaatgtaaaGTGACACTGAAAGCAGGTGGCTCAATTACAGTCAATGATGATGTGATCAAAGGAACTCTGCGAATAGGCAGCAATGTTGAGGTAAAACAAGACCCTAAGAAAGATGCCATAGAAGCTATTATAACTAAGATACAGGATTGCAGCCAGTATACTGTTGTGTTCGATGACGGCGACATAACTACGCTGAGGCGGTCAGCACTGTGCCTCAAAAGCGGGCGGCATTTTAATGAAAGTGAAACGTTAGATCAACTGCCTCTTACACACCCTGAACATTTCTCCACACCAGTGATAGCTGGGCGACGAGGCAGGCGGGGGAGAGCTCAGTCAGATGACAGTGATGGCGAAGGCCCGTCCCGCCCCATCAAACCCGACAGCGCAGAACGCGAGCCTCATGTGGGTCGCGTCGTGCTGGTGGAAGCGGCCAGCGGAGCAGAGAGGCGTCGGCCGCACCAACCAGCGTTCCCGGCCTTGGTGGTCGCACCCACCGCGCAGATCAAAGTCAAGGAAGACTATTTAGTGCGATCTTTCAAGGATGGCAGATATTACACTGTCCCTAAGAAAGAGGCCCGTGAGTTTCGCAAAGGCAGCGCGCCGCTCGAGTGGGCGGGCGTAGAGGCGGCATTGCAATACCTCAACAATGGCGTATTACCGCCGCATTGGGATCGTGACTCGCTCTTCAACGAACCGAGGAATACTTCAGACGATAGCTCTGACGACGAGCCTCGTGAAGAGAAAGATCATTTTGTAGCACAGCTATACAAATTCATGGATGACCGCGGGACCCCACTCAATCGTAACCCGACTATTGCGAACCGAGATATTGATCTGTACAGATTATTCAGAGTGGTGCAAAAACTCGGTGGATACAATAGAGTGACAAATCAAAACCAATGGAAATCAATTGCAGACAAAATGGGCTTCCATCCGGTTACCACAAGTATAACAAACCTTTGCAAGCAGGCTTATAAAAAATTCCTGCACAGCTTCGAAGACTTCTACCGTAAGCTTGGCGTGACGCTGGTCGCTCATCCGCGCGGCGCTCGCACGCCGCCCGCCGGCCGCTCGCTGATCCGCGACCGCGATAAGCAACCCCCCACCTCGTCCTCTGCATGTTCCACGCCCACTGGACCGCCTAGCTTGCGTGGCAAAGACAAGGATTCAGACAAGAGCGAGACAGACAGGAGTGAAAAGGATGACAAATCAGAGAAAGGCGATAAAAAGGAAAAGCCTCAAATAAGCGACGAAGAAGACAGCGCTGACAATCAGCCTCTCATCGTAAATGCACCAAAATTACTAGAAAAAGAAAAGGAAAGGGAGAAGGAACGCGAGAAAGAAAAAGAAATTGAACGAGAAAAAGAGAAAGAAAAAGAGAAGGAAAAGGAAAAAGAACGGGATAAAGAGAAGGAAAAAGAAAAGGAACGTGAGAAGGAAAAAGAAAAGGAGCGCGATAAGGAAAAGGAGAAAGAGAAGGATAGTCACAAGGAGCGCGAGAAAAGCACATCGACCACGACCAGTGAGGAGAAAGTACTGGTGATCAAACCCCGGCCGCGCTCGCAGTCGAAAGCTCGCACTATCACTCCAGTAAGGAATGAACGGACGCCTAAAAGGAGACCGCTGTCGTCGAAAAGTGAAAGTGCCGGCCCCAGCGCGTCCCGAGCGTCAAGACGTCATCAGGTGTCCACTGACAGCGACAGCTCTGTATCGGGCCGAGCGTCAAGATGCGGACCTCTCACGAAGAAATTGCAAAGTCGTCGCAGTCAAAGTGCCAATTCTGCAAGCAGTGGGAACACTATCGCTTCGAGCAGCAGTAAACGTCCTCGAAAAAGGAAGACCACAGAGCCTTCGACAAATGAACCAACACCTCCAAGGATCATTTCTGGTGTTAAAGCTCAAGTTGGGGATAAACTGAAAGTATACTATGGACCTACGCAATCTGAATCAAAGGTGACCTATGAGGCGAAGGTGATAGAGATATCTGCGGAAGGTATGCTTCGTGTGCATTACACTGGTTGGAACACTAGATATGATGAGTGGATCAAACCTCAACGAATCGCCGTCAATGTATCGCAAAATGAGGCTAGAAACAAAAAGGGATCTAGCATGAGCAGACGCGTAAGAGCTAAGAGAACTGAAGAATCGTCAGCTATTTCCGACTCTGATACCTCAGACAGCGACGAAGATATAAAGAGGCCTAAGAAGTCAGATGAAAAATCAAATACTAGCACTCCAGGGTCGAAAGATACAAAGTCTAGCGACAGTAGCAGTTCCAGTAAACCCCGCAAAAGACCTATTCGGAACATATCGACTCCGACGAATGTGTCAACTGCCAAGAAACTCCGCCCTAATGCGCCCTCTCACCAGGGTCGCGACTACGATCTCAACGAAATCAGATCTGAACTGAAAGGCTTCAACACGGTCAAACAAGAACCCGAAGAAAGCAAACCAGACACAGATAAGGAAAAAGAAACGGCCATAAACCCAGCTCAGATACCCATCCCTCCAAACGAACCCCCCGTACCGGAAAAAAGGAAAGAAGAAGACGTTTACGAGTTCAAGGAACCCGAACCGTTTGAATTAGAGCTTCACGACGAAAAGAAAAAACGAACACATCGTATTTTTGATGACATATCTCCAAGCAAATACACGTCCACTCTCTCCAAATCTCTGAGCGAAGAGATCAATGAAGACCCGATGAAGCTTCGTACTAACAGTCTTAGATCACCGTCACTATCACCGTATAGAGACTTCGCTGGAACATCTGGAATTGGAAAACAAAGCCCAGATGACGATTCTAAAGACGATTTGTTCTCCCTGGATGATGATTCGTTCCATGGTGACGGTAGTTCCGGCCCCACATTCGAAGGCTTTACTCCGGCCAAAAACCAAGAAACATATTCCAAGAAAAGCAAAGTCTCAAAGCTCCGACAATTGATTGATGATTCACCTGATAGCCCGGCTGATGACGAACAATCTTCAGATGAATCAGAAGATAATACAATCAAGGAAGAAGATGATGACGATGAAGAGTCGAAATCAATATCACCGAGCACAGGAACCACAGACGAATCTAAATCATCCGCATCATCAGTTCAGGATGAACCGAAAGCAATGGATGTAGACGAAAATGATATCAAAGAAGAAGCGTCAAAAGAAACAGCGGCAATGGTAATAGATTTACAAAATATTCCGAAGCCACCAAATAGCCCACCACCACTACAGAATATAGATATTCCTATGAAAATAGAAGTTCCTGATAAAATCGAAACCCCTGCTAAAATTGAAAATCCCAAAAAACCTGAGGTTACCAAGACATCTGAGCCTCCTAAGAAAGTGGAATCCCCAAAAAAGATTGAGCTTCCCAAAAAAGTTGAACTCCCTAAAAAGAATGATACCCCCAAGAAAACGGAACTTCCGAAGAAAGTGGAACCTGCCAAAAAACTGGAGCCAACTAAAAAAGCTGAACTTTCCAAAAAAGCTGATTTACTTGCTCCTAAAAAAGTTGATGTGCATAAAAAAGTTGAATCTGGCAAGAAGATTGAATTTACTAAGAGGATTGAAAATATCAAGAAAGTTGAAGTTACTAAAAAGACTGAAACGCCCAAAAAGATCGAACTTCCTGATAAGATGGAATCAACTAAGAAGATAGACACAAGTATTAGGAAACTTGAACTCCCAACAATAACAACTATTACACTCCCTGCTATACCTAGCACAAGTATTTTAGCACAAGCTAAGGAGAAAACAGCCGAAGAATTAAAGAAAGAGAATCAAATCAAGTTACTGGCCATACCTCTTCCCTCATCTGAGCCAAAAGAGAAGCCCATTCATGTTACTCCAAAGAAGTTGGATCCAGAGCCTATAAAGAGTAAGCTGGAGACCCCATCGAGTCCTCTCATTGACGCAGAAGAAGATAAATCCGAGCCTGACAGTCCAGCGCGTATCGACGTGTTGCCGGAACCTCCGCCGGGCTTCCTATTACAATCCGAAGGACCCAAAATAGCTGAGAAACTTCTCAAGGCTATCAGTAGTGCGAAGAGGCTATCCATGTCTCCACCGCCAGTGGACAACCGTACCAGCCCAGTTGTTACCAAAACAGATTCCTTGAAACCAACACAGCCTGATAGCAAACTATCGCCTATATCGCCTGAGCCTAGGACTAGTCTCACCAAATCTGAGCCTATCAAACCAGTAGTGAAGATTACCGAGCCGGTAAAGAAGGAAGATTCTATTTTCGGAGAGTCTTCTAACATGGACACTAAAATGGATTCTTTAGATGTGAAGAAAAATGAAAGATCTTCGACTCCAAGGTTGCAAAGTCCTTTGAACATTCTGGAGAGAAGAAAAAGCGTCGCGACGGATTTACCGCTTAGCGTGGTCCCAGGAAAGAATAATAAGGTGCTGAGTGATACCATACAGAAGTTGTCGAGTCAGATCAATCAGTCTGCTGCCATCAACCAATCGGCTGCGTCCGTTGCGAATATACCACTGCCTGCGTCTTCTATTCCTTTCCTATCCGAAGATAGAAGCGAATCTAGTGACTCCGACGATTCTAGTAGAAGGCTAATCATCGACAAGTTATCGCTGGAGGAGTGGGGCAACAGTGGCAGCTCTGACGCGACCCGCCCACCGCCGGTAGCCCCGGCCAGTGCTGGGATAAGGGCGCTGCATCTCGGCAAGTCACCAGGAGAATGGAGCGCGGGGGAATCACTGCTCATGTTGGAAGACGCGTGCAAGAACGAGAGGAAACACAGTGCAAGTGTAGTGGTAGCAGGCAGCGGTCGCGTGGCTTCCATCGCGAGCACGTCTATCCCCGCTATCTCTCAGCCTACCGCGCCCGCGCCCGCTTTGCAAGAAGAGGACAGCAATATATCGCTGTTGCTGTGTGAGGAGACGATCCCCGGGTCTCCTGCGCCGGACGCGGAACCAGCGCCGCCGCGGAGACCACACATGCCGTTCGCATCCGCACCTCCGCATCATCTAGCTAAAGACGACCGCCGCGGGGATGGTCCGTCCCGTGCACACGCGGCGGCGACTAGCGCGGTGGCAGCAGGTGGCGACAGACCCGCGAGTGGCGACAGGCCAGCGGTCGGGGACAGGCCTGCAGGTGGCGAGAGGCCAGCGGGCTGGGGACGCGGCCGTCTGCTGGTCGACCACACGCCGCCAACCACACCGGACAGCAACCGCAGTAGTCTTGAGATGTCGCCGCAAAGAGATCGACGTATGTCTGAACGAGACAGCCCCTTGGAACGCAAGGAGGAGGAAGATGAAAACAGCCGACCGAATGATGCGTCTGTTGATATGGACAAATCTGCTCATGGTATCAGATCTCGCAAAGCGTCGGAGTCGTCAGCGGCGGGCGCGGGGCGCGGCCGACGGCGCGCGCGGCGTGACACGGACGATCACTCGCACAACTCCAATAGCACGGCCACGCTCAAATACAACTTCTATGTGGAGCTCGATCCTAATTGGGACTGCCAGACTCGTATCAACGTGCTGACGACACGCCTTACAGATCTCCGCAAAACTTACCACTCCGTGAAGGCAGAGCTGGCGGCCATTGATCGCCGGCGCAAGAAGCTACGGCGGAAAGAAAGAGAAGCTGTGAAAGCGGCCAAAGCTGCTTGTGCCTGA
Protein Sequence
MLSAQISSAHRSLASSVSKSMSRQKQQGDDPPYLPVGTDVSAKYKGAFCEAKVKKVVRNIKCKVTLKAGGSITVNDDVIKGTLRIGSNVEVKQDPKKDAIEAIITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDDSDGEGPSRPIKPDSAEREPHVGRVVLVEAASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNNGVLPPHWDRDSLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKSIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSACSTPTGPPSLRGKDKDSDKSETDRSEKDDKSEKGDKKEKPQISDEEDSADNQPLIVNAPKLLEKEKEREKEREKEKEIEREKEKEKEKEKEKERDKEKEKEKEREKEKEKERDKEKEKEKDSHKEREKSTSTTTSEEKVLVIKPRPRSQSKARTITPVRNERTPKRRPLSSKSESAGPSASRASRRHQVSTDSDSSVSGRASRCGPLTKKLQSRRSQSANSASSGNTIASSSSKRPRKRKTTEPSTNEPTPPRIISGVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISAEGMLRVHYTGWNTRYDEWIKPQRIAVNVSQNEARNKKGSSMSRRVRAKRTEESSAISDSDTSDSDEDIKRPKKSDEKSNTSTPGSKDTKSSDSSSSSKPRKRPIRNISTPTNVSTAKKLRPNAPSHQGRDYDLNEIRSELKGFNTVKQEPEESKPDTDKEKETAINPAQIPIPPNEPPVPEKRKEEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEINEDPMKLRTNSLRSPSLSPYRDFAGTSGIGKQSPDDDSKDDLFSLDDDSFHGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRQLIDDSPDSPADDEQSSDESEDNTIKEEDDDDEESKSISPSTGTTDESKSSASSVQDEPKAMDVDENDIKEEASKETAAMVIDLQNIPKPPNSPPPLQNIDIPMKIEVPDKIETPAKIENPKKPEVTKTSEPPKKVESPKKIELPKKVELPKKNDTPKKTELPKKVEPAKKLEPTKKAELSKKADLLAPKKVDVHKKVESGKKIEFTKRIENIKKVEVTKKTETPKKIELPDKMESTKKIDTSIRKLELPTITTITLPAIPSTSILAQAKEKTAEELKKENQIKLLAIPLPSSEPKEKPIHVTPKKLDPEPIKSKLETPSSPLIDAEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPVDNRTSPVVTKTDSLKPTQPDSKLSPISPEPRTSLTKSEPIKPVVKITEPVKKEDSIFGESSNMDTKMDSLDVKKNERSSTPRLQSPLNILERRKSVATDLPLSVVPGKNNKVLSDTIQKLSSQINQSAAINQSAASVANIPLPASSIPFLSEDRSESSDSDDSSRRLIIDKLSLEEWGNSGSSDATRPPPVAPASAGIRALHLGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVASIASTSIPAISQPTAPAPALQEEDSNISLLLCEETIPGSPAPDAEPAPPRRPHMPFASAPPHHLAKDDRRGDGPSRAHAAATSAVAAGGDRPASGDRPAVGDRPAGGERPAGWGRGRLLVDHTPPTTPDSNRSSLEMSPQRDRRMSERDSPLERKEEEDENSRPNDASVDMDKSAHGIRSRKASESSAAGAGRGRRRARRDTDDHSHNSNSTATLKYNFYVELDPNWDCQTRINVLTTRLTDLRKTYHSVKAELAAIDRRRKKLRRKEREAVKAAKAACA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00699879;
90% Identity
iTF_01219563;
80% Identity
-