Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947578465.1
Location
OX387921.1:2567435-2571878[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.1e-17 5.9e-14 52.2 15.4 2 64 42 104 42 105 0.94
2 3 0.0013 1.1 9.7 1.7 33 55 87 109 86 115 0.88
3 3 8.8 7.3e+03 -2.5 0.2 33 33 181 181 171 197 0.49

Sequence Information

Coding Sequence
ATGAGTGGTCCGATCATTATCACCGTGCCCAACAATTATCTATTCGACGAAGATGAGTCGGAGATGGGTGTGGACGTGTCCTCTTCCCCGTCCCGGAAGCGAAGGTTGGACCATTTGTCATGGGAGGAGAAAATGCAAAGAAAGAAAATGAAGAACCGCGTCGCAGCCCAAACGTCACGTGACCGGAAAAAGGCCAAAATGGACGAAATGGAAGCGCGCATCGACGGTCTAGAAGAGCGGAACGAGAAGCTAATGAACGAGCTGGAGAGTTTGAAAGCGCTGAACGAGCGTCTGCTTAGCGAGAACGATAAGCTACGCAGTGAGGCGGCGGCGCGGACCGTCGCGGAGGCCCACGGACCCGCAGAGTCCCCTCAGCAGAAGGACGGGCCTCCGCCGGCGATCCGCGCCGCTCGCCTGCTGCTGGCGATGATGCTCCTCTCGCAGACCTCCTCGCGCATCTCGACTCCCCGGAGTACCTCGACACGCTGCATCAGCTCGCAGACTCCCTCTTCCAGGAAATTGATGCGGGAGTTACAGGAGCAGCTCAAATTGAGCAAGCCCGGGGCCTTGGAGAGTGCCTTAAAGAAGCTGAAGTGGTGGGGCCCTCAGCAGAGCAACTGGAACCCACTGAAGATAGCATCCTAG
Protein Sequence
MSGPIIITVPNNYLFDEDESEMGVDVSSSPSRKRRLDHLSWEEKMQRKKMKNRVAAQTSRDRKKAKMDEMEARIDGLEERNEKLMNELESLKALNERLLSENDKLRSEAAARTVAEAHGPAESPQQKDGPPPAIRAARLLLAMMLLSQTSSRISTPRSTSTRCISSQTPSSRKLMRELQEQLKLSKPGALESALKKLKWWGPQQSNWNPLKIAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01171208;
90% Identity
-
80% Identity
-