Basic Information

Insect: Theocolax elegans
Gene Symbol: -
Assembly: GCA_026168455.1
Location: CM047425.1:89814198-89817791[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0062 2.3 10.8 0.5 1 20 111 130 111 131 0.96

2 13 0.0091 3.4 10.3 4.6 2 23 270 292 270 292 0.91

3 13 5.2e-06 0.0019 20.5 0.8 2 23 365 387 364 387 0.95

4 13 6.4 2.4e+03 1.3 7.4 3 23 475 496 474 496 0.86

5 13 0.018 6.6 9.3 0.8 1 23 544 567 544 567 0.95

6 13 0.0011 0.42 13.1 0.0 3 23 616 637 615 637 0.93

7 13 0.00014 0.051 16.0 0.2 2 23 663 685 663 685 0.94

8 13 0.0073 2.7 10.6 3.7 2 23 726 748 725 748 0.96

9 13 0.025 9.4 8.9 2.7 3 23 763 784 761 784 0.94

10 13 1.4e-05 0.0052 19.1 0.2 2 23 829 851 829 851 0.94

11 13 3.3 1.2e+03 2.2 2.3 1 23 934 958 934 958 0.97

12 13 0.00024 0.088 15.2 0.1 2 23 974 996 973 996 0.96

13 13 0.01 3.8 10.1 0.5 1 23 1073 1096 1073 1096 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0062	2.3	10.8	0.5	1	20	111	130	111	131	0.96
2	13	0.0091	3.4	10.3	4.6	2	23	270	292	270	292	0.91
3	13	5.2e-06	0.0019	20.5	0.8	2	23	365	387	364	387	0.95
4	13	6.4	2.4e+03	1.3	7.4	3	23	475	496	474	496	0.86
5	13	0.018	6.6	9.3	0.8	1	23	544	567	544	567	0.95
6	13	0.0011	0.42	13.1	0.0	3	23	616	637	615	637	0.93
7	13	0.00014	0.051	16.0	0.2	2	23	663	685	663	685	0.94
8	13	0.0073	2.7	10.6	3.7	2	23	726	748	725	748	0.96
9	13	0.025	9.4	8.9	2.7	3	23	763	784	761	784	0.94
10	13	1.4e-05	0.0052	19.1	0.2	2	23	829	851	829	851	0.94
11	13	3.3	1.2e+03	2.2	2.3	1	23	934	958	934	958	0.97
12	13	0.00024	0.088	15.2	0.1	2	23	974	996	973	996	0.96
13	13	0.01	3.8	10.1	0.5	1	23	1073	1096	1073	1096	0.98

Sequence Information

Coding Sequence: ATGTCGACGACCCAAGAAAATAGTCTACCCGAGTCGACAGAGATCGATAGCGAGGGTTCGAGCTGCGAGGAGCGTGAATCCCGAAGGCGTATGCTTGGGGACCCGGAGAGTCTACCTAAGAAGCGGCGAAAACAGTCGACACCCGTCAAATTCTCGACCTCACTCAGTCTCGGCGAATGCGACGAGTCGGAGGAAGAACCGACGGCCGAGATTCAGACCTCGAGTAATCATGACAAACCTCACGAGTTGGAAGGTAAGCCAACGACCTCGCCGCACTCTAAATCCATCCAGGGTCACCCAACGATTAAAGACGAGAATCTTAACAATGAATTCCGCTGCCAGTACTGTAGTCAATTTTTTGATAGTCGCGTTACACTCGAGCTGCATCTTGAATGCGAGCACAATTTCGGTATTGCACACCAACCGCAACAACAGCAGCAACAAACATCGACTAACAATCGTGAATCACCACAGATGCTGGCTCAAACGTGCATAAGTCCAGAGACGACTGGTCAAGTACAAAATGCGGAACAATCGATCAGTCCGATCAACTTATCGGGAATTAGTATTAGGAACTTTGCCACGAACGCGTCCTGGTTATCGGGTCAGAATCAAATGCAAGTACAAAACGAGGCTGCGCTCGCTAAAATTGCTGTGAGGAGTAATAATCACTTTCAGTCGATACCCGCGGGTTTTCCCGGTCCCCTCGCTCAATTTCTACCAATGGCCGGGTTTCCTATGCCGGACTCCTCACAAATTCAAAGAGCTGCTATGGGACAGTTCCCAAAAATATTTAATCCAGACGCGTACTGTGATCTTTGTAATAAAGAGTTTTGCAACAAATATTTTCTAAAAACGCACAAGGCCAACAAACACGGTATCTACGTAGATCCGCCCATTACTCAGTCGCAAAATAGTGAAGGTGCGCCTTCAAGTCCGTTTATTTCAACTTCGAGCCCAATAAGCAGTTTGCAAAGTAACATAAAAATCATTGAACAACCCCAACGACTTGAAAACAACGGTATACAGCACCAACAGCAACAGCAACAATCACCACAACAACAACAACAACAGCAACAACAACCAACATTACCTTGTGATATGTGCCCCAAACGATTTAAAAATGAAGATTCATTGAGAAAACATAGGCAAAAAATACATCTTAATCAAAACAACGAGACTGTGGATCCTGCGCAAATTCAAATGACTTTTCCTGGTTCATCCGGCGAAGATGAAAGGCAAAGTCCAGGAGGCATGGAAACTCTTTTCAAGCAAGAGTATAATATAGATCAAGAAGAGACGCATTACACCTCGACACCACGACCAATTGATGTGTCGCCACAGTCAACCCAACAGATAAAAGATTCTACATTTAATGGAGAGCGTTTGCGACGGCTTGGTGTTATGAATCCTGAAGCATTTTGTGAAATATGCTGTAAAGAGTACTGCAATAAATATTTTCTTCGTACACATAAACTCAAAAGGCATGGTATATTCATTCCGGACAACGACAAATCGCCAAATACGCCTAGTTCAGCAGTAACTTGGCATCAAGTCCAGACGAGTCCATTGAATCTTATAATGGCGGATAGTTTGAACGGTTCCGAATCACAAGATAGAACAGAGGAATATGCGTGCAAAAGCTGTGGCATACGTTTCCAAACTCAAGGTCTTTATCATTTGCACGTTGAGAGGATTCATGAAAATGGAGAACAGTTGTCCCCAAAACCGGAGCAAGATACAGAATTATCTGATCAACGAACCGATTCTATTTCCGAAGACCTTCAAAAGCTGCAAACTATGATTTTACAATTAAACGGATTGGAGTCTAATAAAGCTGCTTCGTGCGCTTTGTGTGGTAAAGATTATGATACTCCGAATGCTTTGAAAAGTCATATGATCGCAGAACATGGGGTAATACCTGAAAATTTGTCACAACAGCAAGTACCAAGGGAGAAGTCCCCCACTGCCGCTATCACACAAGCTTATTGTTCTCTTTGCGAAAGGGAATTTGCCAACCAAGAAGCCTTGAGGAAACATATCAACGAAGACCATCAACCGTCAACACCGACGAGTTCGACGCCTCAACATCCATCATCTGTCACCTCAACTCCAAAGTCTAATTCATCTCAAGTGGAAAGAAAAACAACGAGTTCCATTACACCTACGTCAAGCTATTGTGAAATATGTAACAAAGAATTGTGCAACAAATACTTCATGAAAACTCATATGCAAAAGATGCACGGAATCGAAATAGAAAATGGCGCTCAAATCGGTGGCGTTATTTGTAATATCTGCAAGAAAGAACTGTGCAGTAAATACTTCCTACGAGTACACAAACAAAATACACATGGGATTATCGAAGAAGGTGCGTCTACCACGAAACAAGATAGCTTTGAAAATCCACCAAACGCAGATGACTTAGCATTGAAACCTGAACAACTTGGTGATCTCAGTCTGCGGTATATCACTCACTTCACGGAAGTATGTCCCATTTGTAACCGGCGATTCCGTAGCCCTAAATGGCTTAAAGTTCATTTGCAAGGAGAACACGGGAAAGCTGGCATTGACAAATGGCGCGAAATCGAACAGTACCAGCAGGCGGTGCCAAAAACACCAACTCGTGTACCTGGAGTCTCGAAGAACACGCCACACCAACAACAGTCACACGCTAACGCAAGTCTGAGGATACCGAATGGCTTTGAACCGAACCAACAAATACGAGCAGACCTTGCAGCTTTAGGTAATCAAGTTCTCTCCAATTTCTTCGGTGGCTCGTCGGACGAGCAAGCCCAAACTTATCGTTGCTCACAGCTTCACTGTAACTTCTCGACATCCATCTTACCTTTGTTTTTCTTGCACGAAAGATCGCACAATCATCAGGAGAACGCAGGTATCGAAACCGAGCGTAATGTAATTCAATGTACAACTTGTGCACAAACTTTCGCACAACCGGAAATGTTGCGTCAGCACATTGCCACAAGACATCCAAGCCCATTCCCGGGTTTACTCTCGCAATTTCCAATTCCATTGCTCAACGAGTTTGCAATGAACAATGAACTGCAACATCAATCCCAGCAACAAGAAAGAAACGAGTACGGTGAAGTAAAGGACAACTCGCGTCAACCAAGTCCCCAAATAATGAACGAGATCGATACGAATAAAATTAAAAAGTCAGAAGAGAACAATGCGGTGCAAGTCATGCCACAGGGCGCGTACAAGTGTGCTCAGTGCGGTTTCGCTACAGCTAATCTCAACCGGATTAAAAAGCACATAAGGAAGGACCATAAAAGCCTAGGAGATCCCGCAGAAACAGCTCTTGCCGAACTCTCGAAAACCCTTAAGGATGTTGCAAACAAGCACAAAGTTCCAGCGAGTTACGCAATGCCTCAAGACGCTAATCTGACTCCTGATAAAACAATAATGCAACCATTTATTATCGAAGAAATAGAAAGCCCGCAAAATGGTGGTAGTTGTAATAACGATGAGACGAGCTCGGCTTCGAGGCGATTCGCGCCCGCTCTTGTTTTTCTCCCAGTGAAAGCGAGAGTGAGTAGCACACTCACCATGTCTTTCACGCTGAATCCTGCATGA
Protein Sequence: MSTTQENSLPESTEIDSEGSSCEERESRRRMLGDPESLPKKRRKQSTPVKFSTSLSLGECDESEEEPTAEIQTSSNHDKPHELEGKPTTSPHSKSIQGHPTIKDENLNNEFRCQYCSQFFDSRVTLELHLECEHNFGIAHQPQQQQQQTSTNNRESPQMLAQTCISPETTGQVQNAEQSISPINLSGISIRNFATNASWLSGQNQMQVQNEAALAKIAVRSNNHFQSIPAGFPGPLAQFLPMAGFPMPDSSQIQRAAMGQFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPITQSQNSEGAPSSPFISTSSPISSLQSNIKIIEQPQRLENNGIQHQQQQQQSPQQQQQQQQQPTLPCDMCPKRFKNEDSLRKHRQKIHLNQNNETVDPAQIQMTFPGSSGEDERQSPGGMETLFKQEYNIDQEETHYTSTPRPIDVSPQSTQQIKDSTFNGERLRRLGVMNPEAFCEICCKEYCNKYFLRTHKLKRHGIFIPDNDKSPNTPSSAVTWHQVQTSPLNLIMADSLNGSESQDRTEEYACKSCGIRFQTQGLYHLHVERIHENGEQLSPKPEQDTELSDQRTDSISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPNALKSHMIAEHGVIPENLSQQQVPREKSPTAAITQAYCSLCEREFANQEALRKHINEDHQPSTPTSSTPQHPSSVTSTPKSNSSQVERKTTSSITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIIEEGASTTKQDSFENPPNADDLALKPEQLGDLSLRYITHFTEVCPICNRRFRSPKWLKVHLQGEHGKAGIDKWREIEQYQQAVPKTPTRVPGVSKNTPHQQQSHANASLRIPNGFEPNQQIRADLAALGNQVLSNFFGGSSDEQAQTYRCSQLHCNFSTSILPLFFLHERSHNHQENAGIETERNVIQCTTCAQTFAQPEMLRQHIATRHPSPFPGLLSQFPIPLLNEFAMNNELQHQSQQQERNEYGEVKDNSRQPSPQIMNEIDTNKIKKSEENNAVQVMPQGAYKCAQCGFATANLNRIKKHIRKDHKSLGDPAETALAELSKTLKDVANKHKVPASYAMPQDANLTPDKTIMQPFIIEEIESPQNGGSCNNDETSSASRRFAPALVFLPVKARVSSTLTMSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -